RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NCKAP5LQ9HCH0 1330 aa28■■■□□ 2.07
DDX39A-204ENST00000586558 MED14O60244 1454 aa28■■■□□ 2.07
DDX39A-204ENST00000586558 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
DDX39A-204ENST00000586558 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.99■■■□□ 2.07
DDX39A-204ENST00000586558 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
DDX39A-204ENST00000586558 LTKP29376 864 aa27.97■■■□□ 2.07
DDX39A-204ENST00000586558 RPGRIP1LQ68CZ1 1315 aa27.96■■■□□ 2.07
DDX39A-204ENST00000586558 NPHP4O75161 1426 aaPredicted RBP27.94■■■□□ 2.06
DDX39A-204ENST00000586558 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
DDX39A-204ENST00000586558 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
DDX39A-204ENST00000586558 PLEKHG1Q9ULL1 1385 aa27.9■■■□□ 2.06
DDX39A-204ENST00000586558 IQGAP1P46940 1657 aa27.89■■■□□ 2.06
DDX39A-204ENST00000586558 RGL3Q3MIN7 710 aa27.88■■■□□ 2.05
DDX39A-204ENST00000586558 VGFO15240 615 aaPredicted RBP27.86■■■□□ 2.05
DDX39A-204ENST00000586558 CLSPNQ9HAW4 1339 aa27.84■■■□□ 2.05
DDX39A-204ENST00000586558 PPLO60437 1756 aa27.83■■■□□ 2.05
DDX39A-204ENST00000586558 NUTM2DQ5VT03 806 aaPredicted RBP27.83■■■□□ 2.05
DDX39A-204ENST00000586558 IFT172Q9UG01 1749 aa27.81■■■□□ 2.04
DDX39A-204ENST00000586558 STAC3Q96MF2 364 aa27.8■■■□□ 2.04
DDX39A-204ENST00000586558 SETBP1Q9Y6X0 1596 aa27.8■■■□□ 2.04
DDX39A-204ENST00000586558 MYOM2P54296 1465 aa27.79■■■□□ 2.04
DDX39A-204ENST00000586558 BCANQ96GW7 911 aa27.79■■■□□ 2.04
DDX39A-204ENST00000586558 SIN3AQ96ST3 1273 aa27.79■■■□□ 2.04
DDX39A-204ENST00000586558 DIP2AQ14689 1571 aa27.78■■■□□ 2.04
DDX39A-204ENST00000586558 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
DDX39A-204ENST00000586558 ADAMTS13Q76LX8 1427 aa27.75■■■□□ 2.03
DDX39A-204ENST00000586558 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
DDX39A-204ENST00000586558 NRXN1Q9ULB1 1477 aa27.73■■■□□ 2.03
DDX39A-204ENST00000586558 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
DDX39A-204ENST00000586558 SLC26A8Q96RN1 970 aa27.73■■■□□ 2.03
DDX39A-204ENST00000586558 NRXN3Q9Y4C0 1643 aa27.73■■■□□ 2.03
DDX39A-204ENST00000586558 ADGRF5Q8IZF2 1346 aa27.72■■■□□ 2.03
DDX39A-204ENST00000586558 DCAF11Q8TEB1 546 aa27.72■■■□□ 2.03
DDX39A-204ENST00000586558 PIK3C2GO75747 1445 aa27.71■■■□□ 2.03
DDX39A-204ENST00000586558 PIK3R4Q99570 1358 aa27.69■■■□□ 2.02
DDX39A-204ENST00000586558 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
DDX39A-204ENST00000586558 ZNF335Q9H4Z2 1342 aaPredicted RBP27.67■■■□□ 2.02
DDX39A-204ENST00000586558 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
DDX39A-204ENST00000586558 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
DDX39A-204ENST00000586558 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
DDX39A-204ENST00000586558 ALKQ9UM73 1620 aa27.65■■■□□ 2.02
DDX39A-204ENST00000586558 LAMC1P11047 1609 aa27.62■■■□□ 2.01
DDX39A-204ENST00000586558 LTBP4Q8N2S1 1624 aa27.62■■■□□ 2.01
DDX39A-204ENST00000586558 CPS1P31327 1500 aa27.62■■■□□ 2.01
DDX39A-204ENST00000586558 NWD1Q149M9 1564 aa27.61■■■□□ 2.01
DDX39A-204ENST00000586558 KCNA6P17658 529 aa27.61■■■□□ 2.01
DDX39A-204ENST00000586558 SETD1AO15047 1707 aaKnown RBP27.6■■■□□ 2.01
DDX39A-204ENST00000586558 METP08581 1390 aa27.6■■■□□ 2.01
DDX39A-204ENST00000586558 C14orf93Q9H972 538 aaKnown RBP27.59■■■□□ 2.01
DDX39A-204ENST00000586558 TIMELESSQ9UNS1 1208 aa27.58■■■□□ 2.01
DDX39A-204ENST00000586558 PRAG1Q86YV5 1406 aa27.58■■■□□ 2
DDX39A-204ENST00000586558 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
DDX39A-204ENST00000586558 CHD2O14647 1828 aaKnown RBP27.55■■■□□ 2
DDX39A-204ENST00000586558 PTPRUQ92729 1446 aa27.54■■■□□ 2
DDX39A-204ENST00000586558 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
DDX39A-204ENST00000586558 CFAP70Q5T0N1 1121 aa27.53■■■□□ 2
DDX39A-204ENST00000586558 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
DDX39A-204ENST00000586558 AMOTL2Q9Y2J4 779 aa27.51■■□□□ 1.99
DDX39A-204ENST00000586558 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
DDX39A-204ENST00000586558 ILDR1Q86SU0 546 aaPredicted RBP27.5■■□□□ 1.99
DDX39A-204ENST00000586558 KIAA1210Q9ULL0 1709 aa27.5■■□□□ 1.99
DDX39A-204ENST00000586558 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
DDX39A-204ENST00000586558 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
DDX39A-204ENST00000586558 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
DDX39A-204ENST00000586558 PTCH1Q13635 1447 aa27.47■■□□□ 1.99
DDX39A-204ENST00000586558 ADGRB1O14514 1584 aa27.47■■□□□ 1.99
DDX39A-204ENST00000586558 CERKQ8TCT0 537 aa27.46■■□□□ 1.99
DDX39A-204ENST00000586558 YTHDC2Q9H6S0 1430 aaKnown RBP27.46■■□□□ 1.99
DDX39A-204ENST00000586558 TECPR2O15040 1411 aa27.45■■□□□ 1.98
DDX39A-204ENST00000586558 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
DDX39A-204ENST00000586558 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.98
DDX39A-204ENST00000586558 ABCC11Q96J66 1382 aa27.45■■□□□ 1.98
DDX39A-204ENST00000586558 NCOA3Q9Y6Q9 1424 aa27.42■■□□□ 1.98
DDX39A-204ENST00000586558 TMEM94Q12767 1356 aa27.42■■□□□ 1.98
DDX39A-204ENST00000586558 KNDC1Q76NI1 1749 aa27.41■■□□□ 1.98
DDX39A-204ENST00000586558 TRPM1Q7Z4N2 1603 aa27.41■■□□□ 1.98
DDX39A-204ENST00000586558 NBPF8Q3BBV2 869 aa27.39■■□□□ 1.98
DDX39A-204ENST00000586558 STK26Q9P289 416 aa27.39■■□□□ 1.98
DDX39A-204ENST00000586558 ROBO2Q9HCK4 1378 aa27.38■■□□□ 1.97
DDX39A-204ENST00000586558 DLC1Q96QB1 1528 aa27.37■■□□□ 1.97
DDX39A-204ENST00000586558 FAM135BQ49AJ0 1406 aa27.37■■□□□ 1.97
DDX39A-204ENST00000586558 SIRT1Q96EB6 747 aa27.37■■□□□ 1.97
DDX39A-204ENST00000586558 RALGAPBQ86X10 1494 aa27.37■■□□□ 1.97
DDX39A-204ENST00000586558 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
DDX39A-204ENST00000586558 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
DDX39A-204ENST00000586558 GPRASP1Q5JY77 1395 aa27.34■■□□□ 1.97
DDX39A-204ENST00000586558 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
DDX39A-204ENST00000586558 MSH6P52701 1360 aa27.31■■□□□ 1.96
DDX39A-204ENST00000586558 C14orf37Q86TY3 774 aa27.3■■□□□ 1.96
DDX39A-204ENST00000586558 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
DDX39A-204ENST00000586558 TRAK1Q9UPV9 953 aa27.3■■□□□ 1.96
DDX39A-204ENST00000586558 ADGRL3Q9HAR2 1447 aa27.3■■□□□ 1.96
DDX39A-204ENST00000586558 C19orf44Q9H6X5 657 aa27.28■■□□□ 1.96
DDX39A-204ENST00000586558 DCCP43146 1447 aa27.27■■□□□ 1.96
DDX39A-204ENST00000586558 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
DDX39A-204ENST00000586558 PRAM1Q96QH2 718 aa27.26■■□□□ 1.95
DDX39A-204ENST00000586558 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
DDX39A-204ENST00000586558 POGKQ9P215 609 aa27.25■■□□□ 1.95
DDX39A-204ENST00000586558 ARHGEF28Q8N1W1 1705 aaKnown RBP27.24■■□□□ 1.95
DDX39A-204ENST00000586558 PLEKHH1Q9ULM0 1364 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms