RNA–Protein interactions for RNA: ENST00000586373.1

LINC01028-201, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 1 (best) BASIC

Gene LINC01028, Length 1,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-201ENST00000586373 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.41
LINC01028-201ENST00000586373 EMILIN3Q9NT22 766 aa12.46□□□□□ -0.41
LINC01028-201ENST00000586373 CUX1P39880 1505 aa12.46□□□□□ -0.42
LINC01028-201ENST00000586373 PTPN5P54829 565 aa12.45□□□□□ -0.42
LINC01028-201ENST00000586373 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
LINC01028-201ENST00000586373 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
LINC01028-201ENST00000586373 KCNH8Q96L42 1107 aa12.45□□□□□ -0.42
LINC01028-201ENST00000586373 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
LINC01028-201ENST00000586373 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
LINC01028-201ENST00000586373 HSPA1LP34931 641 aa12.44□□□□□ -0.42
LINC01028-201ENST00000586373 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
LINC01028-201ENST00000586373 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
LINC01028-201ENST00000586373 PTPREP23469 700 aa12.43□□□□□ -0.42
LINC01028-201ENST00000586373 MFSD10Q14728 455 aa12.43□□□□□ -0.42
LINC01028-201ENST00000586373 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
LINC01028-201ENST00000586373 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
LINC01028-201ENST00000586373 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
LINC01028-201ENST00000586373 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
LINC01028-201ENST00000586373 PTPRGP23470 1445 aa12.37□□□□□ -0.43
LINC01028-201ENST00000586373 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
LINC01028-201ENST00000586373 PTPRTO14522 1441 aa12.37□□□□□ -0.43
LINC01028-201ENST00000586373 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
LINC01028-201ENST00000586373 PREX1Q8TCU6 1659 aa12.34□□□□□ -0.43
LINC01028-201ENST00000586373 MAGI3Q5TCQ9 1506 aa12.33□□□□□ -0.44
LINC01028-201ENST00000586373 COL9A1P20849 921 aa12.33□□□□□ -0.44
LINC01028-201ENST00000586373 WNT2BQ93097 391 aa12.33□□□□□ -0.44
LINC01028-201ENST00000586373 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
LINC01028-201ENST00000586373 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
LINC01028-201ENST00000586373 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
LINC01028-201ENST00000586373 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
LINC01028-201ENST00000586373 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
LINC01028-201ENST00000586373 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
LINC01028-201ENST00000586373 GOLGA8CPA6NN73 597 aa12.3□□□□□ -0.44
LINC01028-201ENST00000586373 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.44
LINC01028-201ENST00000586373 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
LINC01028-201ENST00000586373 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
LINC01028-201ENST00000586373 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
LINC01028-201ENST00000586373 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
LINC01028-201ENST00000586373 RAPGEF3O95398 923 aa12.24□□□□□ -0.45
LINC01028-201ENST00000586373 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
LINC01028-201ENST00000586373 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
LINC01028-201ENST00000586373 SRCAPQ6ZRS2 3230 aa12.24□□□□□ -0.45
LINC01028-201ENST00000586373 NBPF3Q9H094 633 aa12.24□□□□□ -0.45
LINC01028-201ENST00000586373 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 DPYSL4O14531 572 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 PHF14O94880 888 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 FER1L4A9Z1Z3 1794 aa12.23□□□□□ -0.45
LINC01028-201ENST00000586373 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
LINC01028-201ENST00000586373 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
LINC01028-201ENST00000586373 TTC37Q6PGP7 1564 aa12.22□□□□□ -0.45
LINC01028-201ENST00000586373 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
LINC01028-201ENST00000586373 POTEAQ6S8J7 498 aa12.21□□□□□ -0.45
LINC01028-201ENST00000586373 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
LINC01028-201ENST00000586373 MLECQ14165 292 aa12.2□□□□□ -0.46
LINC01028-201ENST00000586373 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
LINC01028-201ENST00000586373 CEBPAP49715 358 aaPredicted RBP12.19□□□□□ -0.46
LINC01028-201ENST00000586373 BCAMP50895 628 aa12.19□□□□□ -0.46
LINC01028-201ENST00000586373 C6orf132Q5T0Z8 1188 aa12.19□□□□□ -0.46
LINC01028-201ENST00000586373 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
LINC01028-201ENST00000586373 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
LINC01028-201ENST00000586373 A0A0G2JS52 829 aa12.16□□□□□ -0.46
LINC01028-201ENST00000586373 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
LINC01028-201ENST00000586373 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
LINC01028-201ENST00000586373 DDX12PQ92771 950 aa12.15□□□□□ -0.46
LINC01028-201ENST00000586373 FRMPD1Q5SYB0 1578 aa12.14□□□□□ -0.47
LINC01028-201ENST00000586373 TOM1O60784 492 aa12.14□□□□□ -0.47
LINC01028-201ENST00000586373 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
LINC01028-201ENST00000586373 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
LINC01028-201ENST00000586373 SIGLEC1Q9BZZ2 1709 aa12.14□□□□□ -0.47
LINC01028-201ENST00000586373 FANCAO15360 1455 aa12.14□□□□□ -0.47
LINC01028-201ENST00000586373 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
LINC01028-201ENST00000586373 EPAS1Q99814 870 aa12.13□□□□□ -0.47
LINC01028-201ENST00000586373 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
LINC01028-201ENST00000586373 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
LINC01028-201ENST00000586373 LAPTM4BQ86VI4 370 aa12.11□□□□□ -0.47
LINC01028-201ENST00000586373 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
LINC01028-201ENST00000586373 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
LINC01028-201ENST00000586373 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
LINC01028-201ENST00000586373 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
LINC01028-201ENST00000586373 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
LINC01028-201ENST00000586373 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
LINC01028-201ENST00000586373 RGS20O76081 388 aa12.08□□□□□ -0.48
LINC01028-201ENST00000586373 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
LINC01028-201ENST00000586373 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
LINC01028-201ENST00000586373 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
LINC01028-201ENST00000586373 SETD1BQ9UPS6 1966 aaKnown RBP12.05□□□□□ -0.48
LINC01028-201ENST00000586373 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
LINC01028-201ENST00000586373 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
LINC01028-201ENST00000586373 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
LINC01028-201ENST00000586373 AKNAQ7Z591 1439 aa12.03□□□□□ -0.48
LINC01028-201ENST00000586373 NBR1Q14596 966 aa12.03□□□□□ -0.48
LINC01028-201ENST00000586373 IRX2Q9BZI1 471 aaPredicted RBP12.03□□□□□ -0.48
LINC01028-201ENST00000586373 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
LINC01028-201ENST00000586373 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
LINC01028-201ENST00000586373 PDIA6Q15084 440 aa12.01□□□□□ -0.49
LINC01028-201ENST00000586373 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
LINC01028-201ENST00000586373 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms