RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SLIT1O75093 1534 aa19.7■□□□□ 0.74
VMP1-203ENST00000586245 ARHGAP23Q9P227 1491 aa19.69■□□□□ 0.74
VMP1-203ENST00000586245 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
VMP1-203ENST00000586245 PPP1R15AO75807 674 aaPredicted RBP19.68■□□□□ 0.74
VMP1-203ENST00000586245 TXNDC2Q86VQ3 553 aa19.68■□□□□ 0.74
VMP1-203ENST00000586245 TONSLQ96HA7 1378 aa19.68■□□□□ 0.74
VMP1-203ENST00000586245 ZFYVE9O95405 1425 aa19.67■□□□□ 0.74
VMP1-203ENST00000586245 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
VMP1-203ENST00000586245 VGFO15240 615 aaPredicted RBP19.65■□□□□ 0.74
VMP1-203ENST00000586245 NUTM2DQ5VT03 806 aaPredicted RBP19.65■□□□□ 0.74
VMP1-203ENST00000586245 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
VMP1-203ENST00000586245 SCAF11Q99590 1463 aaKnown RBP19.65■□□□□ 0.74
VMP1-203ENST00000586245 LTKP29376 864 aa19.64■□□□□ 0.73
VMP1-203ENST00000586245 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
VMP1-203ENST00000586245 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
VMP1-203ENST00000586245 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
VMP1-203ENST00000586245 PPLO60437 1756 aa19.62■□□□□ 0.73
VMP1-203ENST00000586245 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
VMP1-203ENST00000586245 BCANQ96GW7 911 aa19.61■□□□□ 0.73
VMP1-203ENST00000586245 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
VMP1-203ENST00000586245 POLR1AO95602 1720 aaPredicted RBP19.6■□□□□ 0.73
VMP1-203ENST00000586245 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
VMP1-203ENST00000586245 MYOM2P54296 1465 aa19.6■□□□□ 0.73
VMP1-203ENST00000586245 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
VMP1-203ENST00000586245 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
VMP1-203ENST00000586245 ADGRF5Q8IZF2 1346 aa19.57■□□□□ 0.72
VMP1-203ENST00000586245 MED14O60244 1454 aa19.57■□□□□ 0.72
VMP1-203ENST00000586245 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
VMP1-203ENST00000586245 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
VMP1-203ENST00000586245 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
VMP1-203ENST00000586245 IQGAP1P46940 1657 aa19.53■□□□□ 0.72
VMP1-203ENST00000586245 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
VMP1-203ENST00000586245 SETBP1Q9Y6X0 1596 aa19.52■□□□□ 0.71
VMP1-203ENST00000586245 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
VMP1-203ENST00000586245 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
VMP1-203ENST00000586245 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
VMP1-203ENST00000586245 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
VMP1-203ENST00000586245 TBX22Q9Y458 520 aa19.48■□□□□ 0.71
VMP1-203ENST00000586245 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
VMP1-203ENST00000586245 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
VMP1-203ENST00000586245 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
VMP1-203ENST00000586245 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
VMP1-203ENST00000586245 C14orf93Q9H972 538 aaKnown RBP19.46■□□□□ 0.71
VMP1-203ENST00000586245 LAMC1P11047 1609 aa19.46■□□□□ 0.71
VMP1-203ENST00000586245 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
VMP1-203ENST00000586245 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
VMP1-203ENST00000586245 PIK3R4Q99570 1358 aa19.42■□□□□ 0.7
VMP1-203ENST00000586245 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
VMP1-203ENST00000586245 METP08581 1390 aa19.41■□□□□ 0.7
VMP1-203ENST00000586245 TRPM1Q7Z4N2 1603 aa19.4■□□□□ 0.7
VMP1-203ENST00000586245 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.7
VMP1-203ENST00000586245 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
VMP1-203ENST00000586245 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
VMP1-203ENST00000586245 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
VMP1-203ENST00000586245 KCNA6P17658 529 aa19.37■□□□□ 0.69
VMP1-203ENST00000586245 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
VMP1-203ENST00000586245 ASXL1Q8IXJ9 1541 aa19.36■□□□□ 0.69
VMP1-203ENST00000586245 AMOTL2Q9Y2J4 779 aa19.36■□□□□ 0.69
VMP1-203ENST00000586245 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
VMP1-203ENST00000586245 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
VMP1-203ENST00000586245 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
VMP1-203ENST00000586245 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
VMP1-203ENST00000586245 ZNF335Q9H4Z2 1342 aaPredicted RBP19.35■□□□□ 0.69
VMP1-203ENST00000586245 STK26Q9P289 416 aa19.35■□□□□ 0.69
VMP1-203ENST00000586245 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
VMP1-203ENST00000586245 CHD2O14647 1828 aaKnown RBP19.33■□□□□ 0.69
VMP1-203ENST00000586245 GPRASP1Q5JY77 1395 aa19.32■□□□□ 0.68
VMP1-203ENST00000586245 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
VMP1-203ENST00000586245 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
VMP1-203ENST00000586245 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
VMP1-203ENST00000586245 XRN1Q8IZH2 1706 aaKnown RBP19.3■□□□□ 0.68
VMP1-203ENST00000586245 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
VMP1-203ENST00000586245 TECPR2O15040 1411 aa19.29■□□□□ 0.68
VMP1-203ENST00000586245 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
VMP1-203ENST00000586245 CPS1P31327 1500 aa19.28■□□□□ 0.68
VMP1-203ENST00000586245 KNDC1Q76NI1 1749 aa19.28■□□□□ 0.68
VMP1-203ENST00000586245 PROSER2Q86WR7 435 aaPredicted RBP19.27■□□□□ 0.68
VMP1-203ENST00000586245 STRCP1A6NGW2 1772 aa19.27■□□□□ 0.67
VMP1-203ENST00000586245 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
VMP1-203ENST00000586245 SIRT1Q96EB6 747 aa19.26■□□□□ 0.67
VMP1-203ENST00000586245 POGKQ9P215 609 aa19.26■□□□□ 0.67
VMP1-203ENST00000586245 EIF3AQ14152 1382 aaKnown RBP19.26■□□□□ 0.67
VMP1-203ENST00000586245 ROBO2Q9HCK4 1378 aa19.26■□□□□ 0.67
VMP1-203ENST00000586245 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
VMP1-203ENST00000586245 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
VMP1-203ENST00000586245 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
VMP1-203ENST00000586245 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
VMP1-203ENST00000586245 ARHGEF28Q8N1W1 1705 aaKnown RBP19.22■□□□□ 0.67
VMP1-203ENST00000586245 TMEM94Q12767 1356 aa19.21■□□□□ 0.67
VMP1-203ENST00000586245 USP47Q96K76 1375 aa19.21■□□□□ 0.67
VMP1-203ENST00000586245 LRRC7Q96NW7 1537 aa19.21■□□□□ 0.67
VMP1-203ENST00000586245 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.67
VMP1-203ENST00000586245 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
VMP1-203ENST00000586245 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
VMP1-203ENST00000586245 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
VMP1-203ENST00000586245 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
VMP1-203ENST00000586245 NCOA3Q9Y6Q9 1424 aa19.19■□□□□ 0.66
VMP1-203ENST00000586245 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
VMP1-203ENST00000586245 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
VMP1-203ENST00000586245 MINK1Q8N4C8 1332 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms