RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 FAM135BQ49AJ0 1406 aa30.42■■■□□ 2.46
PTBP1-208ENST00000585956 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
PTBP1-208ENST00000585956 TMEM131LA2VDJ0 1609 aa30.41■■■□□ 2.46
PTBP1-208ENST00000585956 RPRD2Q5VT52 1461 aaKnown RBP30.41■■■□□ 2.46
PTBP1-208ENST00000585956 UNC13BO14795 1591 aa30.41■■■□□ 2.46
PTBP1-208ENST00000585956 SLC52A1Q9NWF4 448 aa30.4■■■□□ 2.46
PTBP1-208ENST00000585956 PROSER2Q86WR7 435 aaPredicted RBP30.39■■■□□ 2.46
PTBP1-208ENST00000585956 E9PCH4 1651 aa30.37■■■□□ 2.45
PTBP1-208ENST00000585956 RIMS2Q9UQ26 1411 aa30.36■■■□□ 2.45
PTBP1-208ENST00000585956 NKTRP30414 1462 aaKnown RBP30.36■■■□□ 2.45
PTBP1-208ENST00000585956 CHD2O14647 1828 aaKnown RBP30.34■■■□□ 2.45
PTBP1-208ENST00000585956 PLEKHG1Q9ULL1 1385 aa30.33■■■□□ 2.45
PTBP1-208ENST00000585956 NUTM2DQ5VT03 806 aaPredicted RBP30.31■■■□□ 2.44
PTBP1-208ENST00000585956 BCANQ96GW7 911 aa30.3■■■□□ 2.44
PTBP1-208ENST00000585956 IQGAP3Q86VI3 1631 aa30.27■■■□□ 2.44
PTBP1-208ENST00000585956 ADAMTS13Q76LX8 1427 aa30.27■■■□□ 2.44
PTBP1-208ENST00000585956 POTEAQ6S8J7 498 aa30.24■■■□□ 2.43
PTBP1-208ENST00000585956 CHGAP10645 457 aaKnown RBP30.23■■■□□ 2.43
PTBP1-208ENST00000585956 PPARGC1BQ86YN6 1023 aaKnown RBP30.23■■■□□ 2.43
PTBP1-208ENST00000585956 ROCK1Q13464 1354 aa30.23■■■□□ 2.43
PTBP1-208ENST00000585956 PPP1R15AO75807 674 aaPredicted RBP30.22■■■□□ 2.43
PTBP1-208ENST00000585956 MSH6P52701 1360 aa30.22■■■□□ 2.43
PTBP1-208ENST00000585956 PHLPP1O60346 1717 aa30.22■■■□□ 2.43
PTBP1-208ENST00000585956 SLAIN2Q9P270 581 aa30.2■■■□□ 2.43
PTBP1-208ENST00000585956 ITGAEP38570 1179 aa30.18■■■□□ 2.42
PTBP1-208ENST00000585956 TBX22Q9Y458 520 aa30.18■■■□□ 2.42
PTBP1-208ENST00000585956 PTPRUQ92729 1446 aa30.16■■■□□ 2.42
PTBP1-208ENST00000585956 COL16A1Q07092 1604 aaPredicted RBP30.16■■■□□ 2.42
PTBP1-208ENST00000585956 NUP155O75694 1391 aa30.15■■■□□ 2.42
PTBP1-208ENST00000585956 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.13■■■□□ 2.41
PTBP1-208ENST00000585956 NRXN3Q9Y4C0 1643 aa30.13■■■□□ 2.41
PTBP1-208ENST00000585956 DIP2AQ14689 1571 aa30.11■■■□□ 2.41
PTBP1-208ENST00000585956 LRP6O75581 1613 aa30.09■■■□□ 2.41
PTBP1-208ENST00000585956 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.09■■■□□ 2.41
PTBP1-208ENST00000585956 SETD1AO15047 1707 aaKnown RBP30.08■■■□□ 2.41
PTBP1-208ENST00000585956 HDGFP51858 240 aaKnown RBP30.07■■■□□ 2.4
PTBP1-208ENST00000585956 NCOA3Q9Y6Q9 1424 aa30.05■■■□□ 2.4
PTBP1-208ENST00000585956 SPHKAPQ2M3C7 1700 aa30.05■■■□□ 2.4
PTBP1-208ENST00000585956 JCADQ9P266 1359 aa30.05■■■□□ 2.4
PTBP1-208ENST00000585956 TRPM2O94759 1503 aa30.04■■■□□ 2.4
PTBP1-208ENST00000585956 AMOTL2Q9Y2J4 779 aa30.03■■■□□ 2.4
PTBP1-208ENST00000585956 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
PTBP1-208ENST00000585956 XRN1Q8IZH2 1706 aaKnown RBP30.02■■■□□ 2.4
PTBP1-208ENST00000585956 C14orf37Q86TY3 774 aa30.02■■■□□ 2.4
PTBP1-208ENST00000585956 AHDC1Q5TGY3 1603 aaPredicted RBP30.01■■■□□ 2.39
PTBP1-208ENST00000585956 SETBP1Q9Y6X0 1596 aa29.99■■■□□ 2.39
PTBP1-208ENST00000585956 CLTCL1P53675 1640 aa29.99■■■□□ 2.39
PTBP1-208ENST00000585956 C19orf44Q9H6X5 657 aa29.98■■■□□ 2.39
PTBP1-208ENST00000585956 METP08581 1390 aa29.98■■■□□ 2.39
PTBP1-208ENST00000585956 BRINP3Q76B58 766 aa29.94■■■□□ 2.38
PTBP1-208ENST00000585956 CADPS2Q86UW7 1296 aa29.94■■■□□ 2.38
PTBP1-208ENST00000585956 SHPRHQ149N8 1683 aa29.94■■■□□ 2.38
PTBP1-208ENST00000585956 NEXMIFQ5QGS0 1516 aa29.93■■■□□ 2.38
PTBP1-208ENST00000585956 ATF3P18847 181 aa29.93■■■□□ 2.38
PTBP1-208ENST00000585956 MST1RQ04912 1400 aa29.89■■■□□ 2.38
PTBP1-208ENST00000585956 ASXL1Q8IXJ9 1541 aa29.89■■■□□ 2.38
PTBP1-208ENST00000585956 ZNF326Q5BKZ1 582 aaKnown RBP29.88■■■□□ 2.37
PTBP1-208ENST00000585956 NAIPQ13075 1403 aa29.88■■■□□ 2.37
PTBP1-208ENST00000585956 SPATA31A6Q5VVP1 1343 aa29.87■■■□□ 2.37
PTBP1-208ENST00000585956 NALCNQ8IZF0 1738 aa29.86■■■□□ 2.37
PTBP1-208ENST00000585956 RRBP1Q9P2E9 1410 aaKnown RBP29.86■■■□□ 2.37
PTBP1-208ENST00000585956 DCCP43146 1447 aa29.85■■■□□ 2.37
PTBP1-208ENST00000585956 NHSL1Q5SYE7 1610 aa29.85■■■□□ 2.37
PTBP1-208ENST00000585956 DDX17Q92841 729 aaKnown RBP29.84■■■□□ 2.37
PTBP1-208ENST00000585956 MEX3CQ5U5Q3 659 aaKnown RBP29.79■■■□□ 2.36
PTBP1-208ENST00000585956 ADGRL3Q9HAR2 1447 aa29.79■■■□□ 2.36
PTBP1-208ENST00000585956 KIF1BO60333 1816 aa29.78■■■□□ 2.36
PTBP1-208ENST00000585956 NUTM2BA6NNL0 878 aaPredicted RBP29.78■■■□□ 2.36
PTBP1-208ENST00000585956 NUTM2EB1AL46 878 aaPredicted RBP29.78■■■□□ 2.36
PTBP1-208ENST00000585956 NUTM2AQ8IVF1 878 aaPredicted RBP29.78■■■□□ 2.36
PTBP1-208ENST00000585956 SETD5Q9C0A6 1442 aa29.77■■■□□ 2.36
PTBP1-208ENST00000585956 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
PTBP1-208ENST00000585956 ROBO2Q9HCK4 1378 aa29.72■■■□□ 2.35
PTBP1-208ENST00000585956 ZNF772Q68DY9 489 aaPredicted RBP29.71■■■□□ 2.35
PTBP1-208ENST00000585956 C1orf167Q5SNV9 1468 aa29.68■■■□□ 2.34
PTBP1-208ENST00000585956 PNPLA6Q8IY17 1366 aa29.68■■■□□ 2.34
PTBP1-208ENST00000585956 HFM1A2PYH4 1435 aa29.68■■■□□ 2.34
PTBP1-208ENST00000585956 AFF2P51816 1311 aa29.68■■■□□ 2.34
PTBP1-208ENST00000585956 UPF1Q92900 1129 aaKnown RBP eCLIP29.66■■■□□ 2.34
PTBP1-208ENST00000585956 PPLO60437 1756 aa29.66■■■□□ 2.34
PTBP1-208ENST00000585956 PTCH1Q13635 1447 aa29.65■■■□□ 2.34
PTBP1-208ENST00000585956 FOXD1Q16676 465 aa29.64■■■□□ 2.34
PTBP1-208ENST00000585956 LAMC1P11047 1609 aa29.63■■■□□ 2.33
PTBP1-208ENST00000585956 ORAI2Q96SN7 254 aa29.62■■■□□ 2.33
PTBP1-208ENST00000585956 RXRBP28702 533 aa29.61■■■□□ 2.33
PTBP1-208ENST00000585956 LRRC59Q96AG4 307 aaKnown RBP29.61■■■□□ 2.33
PTBP1-208ENST00000585956 PRAG1Q86YV5 1406 aa29.6■■■□□ 2.33
PTBP1-208ENST00000585956 C8orf37Q96NL8 207 aa29.59■■■□□ 2.33
PTBP1-208ENST00000585956 SLC4A1APQ9BWU0 796 aaKnown RBP29.58■■■□□ 2.33
PTBP1-208ENST00000585956 RGS12O14924 1447 aa29.57■■■□□ 2.32
PTBP1-208ENST00000585956 VGFO15240 615 aaPredicted RBP29.56■■■□□ 2.32
PTBP1-208ENST00000585956 CDK12Q9NYV4 1490 aaPredicted RBP29.55■■■□□ 2.32
PTBP1-208ENST00000585956 SOS2Q07890 1332 aaPredicted RBP29.53■■■□□ 2.32
PTBP1-208ENST00000585956 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
PTBP1-208ENST00000585956 ADAMTS2O95450 1211 aa29.53■■■□□ 2.32
PTBP1-208ENST00000585956 RPGRIP1LQ68CZ1 1315 aa29.51■■■□□ 2.32
PTBP1-208ENST00000585956 QTRT2Q9H974 415 aaKnown RBP29.49■■■□□ 2.31
PTBP1-208ENST00000585956 IFT172Q9UG01 1749 aa29.48■■■□□ 2.31
PTBP1-208ENST00000585956 SPATA31E1Q6ZUB1 1445 aa29.47■■■□□ 2.31
PTBP1-208ENST00000585956 SRCAPQ6ZRS2 3230 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms