RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
MBD3-203ENST00000585903 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
MBD3-203ENST00000585903 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
MBD3-203ENST00000585903 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
MBD3-203ENST00000585903 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
MBD3-203ENST00000585903 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
MBD3-203ENST00000585903 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
MBD3-203ENST00000585903 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
MBD3-203ENST00000585903 E9PCH4 1651 aa16.28■□□□□ 0.2
MBD3-203ENST00000585903 CHD2O14647 1828 aaKnown RBP16.28■□□□□ 0.2
MBD3-203ENST00000585903 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
MBD3-203ENST00000585903 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
MBD3-203ENST00000585903 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
MBD3-203ENST00000585903 DIP2AQ14689 1571 aa16.27■□□□□ 0.2
MBD3-203ENST00000585903 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
MBD3-203ENST00000585903 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
MBD3-203ENST00000585903 PIK3R4Q99570 1358 aa16.25■□□□□ 0.19
MBD3-203ENST00000585903 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
MBD3-203ENST00000585903 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
MBD3-203ENST00000585903 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
MBD3-203ENST00000585903 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
MBD3-203ENST00000585903 MSH6P52701 1360 aa16.21■□□□□ 0.19
MBD3-203ENST00000585903 NUP155O75694 1391 aa16.19■□□□□ 0.18
MBD3-203ENST00000585903 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
MBD3-203ENST00000585903 SPHKAPQ2M3C7 1700 aa16.18■□□□□ 0.18
MBD3-203ENST00000585903 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
MBD3-203ENST00000585903 BCANQ96GW7 911 aa16.17■□□□□ 0.18
MBD3-203ENST00000585903 TRPM2O94759 1503 aa16.17■□□□□ 0.18
MBD3-203ENST00000585903 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
MBD3-203ENST00000585903 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
MBD3-203ENST00000585903 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
MBD3-203ENST00000585903 DCCP43146 1447 aa16.12■□□□□ 0.17
MBD3-203ENST00000585903 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
MBD3-203ENST00000585903 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
MBD3-203ENST00000585903 C19orf44Q9H6X5 657 aa16.11■□□□□ 0.17
MBD3-203ENST00000585903 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
MBD3-203ENST00000585903 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
MBD3-203ENST00000585903 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
MBD3-203ENST00000585903 XRN1Q8IZH2 1706 aaKnown RBP16.1■□□□□ 0.17
MBD3-203ENST00000585903 JCADQ9P266 1359 aa16.1■□□□□ 0.17
MBD3-203ENST00000585903 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
MBD3-203ENST00000585903 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.175e-6■■□□□ 11.5
MBD3-203ENST00000585903 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.17
MBD3-203ENST00000585903 NAIPQ13075 1403 aa16.08■□□□□ 0.16
MBD3-203ENST00000585903 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
MBD3-203ENST00000585903 KIF1BO60333 1816 aa16.07■□□□□ 0.16
MBD3-203ENST00000585903 ITGAEP38570 1179 aa16.06■□□□□ 0.16
MBD3-203ENST00000585903 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 ATF3P18847 181 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
MBD3-203ENST00000585903 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
MBD3-203ENST00000585903 LRP6O75581 1613 aa16.04■□□□□ 0.16
MBD3-203ENST00000585903 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
MBD3-203ENST00000585903 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
MBD3-203ENST00000585903 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
MBD3-203ENST00000585903 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
MBD3-203ENST00000585903 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
MBD3-203ENST00000585903 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
MBD3-203ENST00000585903 ADGRL3Q9HAR2 1447 aa15.99■□□□□ 0.15
MBD3-203ENST00000585903 METP08581 1390 aa15.99■□□□□ 0.15
MBD3-203ENST00000585903 NHSL1Q5SYE7 1610 aa15.98■□□□□ 0.15
MBD3-203ENST00000585903 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
MBD3-203ENST00000585903 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
MBD3-203ENST00000585903 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
MBD3-203ENST00000585903 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
MBD3-203ENST00000585903 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
MBD3-203ENST00000585903 MST1RQ04912 1400 aa15.97■□□□□ 0.15
MBD3-203ENST00000585903 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
MBD3-203ENST00000585903 BRINP3Q76B58 766 aa15.97■□□□□ 0.15
MBD3-203ENST00000585903 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
MBD3-203ENST00000585903 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
MBD3-203ENST00000585903 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
MBD3-203ENST00000585903 LAMC1P11047 1609 aa15.96■□□□□ 0.15
MBD3-203ENST00000585903 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
MBD3-203ENST00000585903 PPLO60437 1756 aa15.95■□□□□ 0.14
MBD3-203ENST00000585903 RXRBP28702 533 aa15.91■□□□□ 0.14
MBD3-203ENST00000585903 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
MBD3-203ENST00000585903 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
MBD3-203ENST00000585903 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
MBD3-203ENST00000585903 C1orf167Q5SNV9 1468 aa15.87■□□□□ 0.13
MBD3-203ENST00000585903 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
MBD3-203ENST00000585903 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
MBD3-203ENST00000585903 IFT172Q9UG01 1749 aa15.86■□□□□ 0.13
MBD3-203ENST00000585903 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
MBD3-203ENST00000585903 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
MBD3-203ENST00000585903 TECPR2O15040 1411 aa15.85■□□□□ 0.13
MBD3-203ENST00000585903 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
MBD3-203ENST00000585903 PNPLA6Q8IY17 1366 aa15.84■□□□□ 0.13
MBD3-203ENST00000585903 RGS12O14924 1447 aa15.84■□□□□ 0.13
MBD3-203ENST00000585903 KNDC1Q76NI1 1749 aa15.82■□□□□ 0.12
MBD3-203ENST00000585903 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
MBD3-203ENST00000585903 AFF2P51816 1311 aa15.81■□□□□ 0.12
MBD3-203ENST00000585903 COL22A1Q8NFW1 1626 aaPredicted RBP15.81■□□□□ 0.12
MBD3-203ENST00000585903 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
MBD3-203ENST00000585903 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
MBD3-203ENST00000585903 ABCC11Q96J66 1382 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms