RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.68
RBFOX1-222ENST00000585867 HDGFP51858 240 aaKnown RBP25.57■■□□□ 1.68
RBFOX1-222ENST00000585867 ARHGAP23Q9P227 1491 aa25.57■■□□□ 1.68
RBFOX1-222ENST00000585867 NUTM2DQ5VT03 806 aaPredicted RBP25.56■■□□□ 1.68
RBFOX1-222ENST00000585867 TXNDC2Q86VQ3 553 aa25.56■■□□□ 1.68
RBFOX1-222ENST00000585867 EID1Q9Y6B2 187 aa25.56■■□□□ 1.68
RBFOX1-222ENST00000585867 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
RBFOX1-222ENST00000585867 LTKP29376 864 aa25.55■■□□□ 1.68
RBFOX1-222ENST00000585867 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.55■■□□□ 1.68
RBFOX1-222ENST00000585867 ZFYVE9O95405 1425 aa25.55■■□□□ 1.68
RBFOX1-222ENST00000585867 NEXMIFQ5QGS0 1516 aa25.54■■□□□ 1.68
RBFOX1-222ENST00000585867 DCAF11Q8TEB1 546 aa25.53■■□□□ 1.68
RBFOX1-222ENST00000585867 L3MBTL2Q969R5 705 aa25.52■■□□□ 1.68
RBFOX1-222ENST00000585867 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
RBFOX1-222ENST00000585867 NCKAP5LQ9HCH0 1330 aa25.51■■□□□ 1.67
RBFOX1-222ENST00000585867 VGFO15240 615 aaPredicted RBP25.51■■□□□ 1.67
RBFOX1-222ENST00000585867 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
RBFOX1-222ENST00000585867 PPLO60437 1756 aa25.5■■□□□ 1.67
RBFOX1-222ENST00000585867 SCAF11Q99590 1463 aaKnown RBP25.5■■□□□ 1.67
RBFOX1-222ENST00000585867 IFT172Q9UG01 1749 aa25.48■■□□□ 1.67
RBFOX1-222ENST00000585867 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
RBFOX1-222ENST00000585867 STAC3Q96MF2 364 aa25.46■■□□□ 1.67
RBFOX1-222ENST00000585867 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.67
RBFOX1-222ENST00000585867 ADGRF5Q8IZF2 1346 aa25.45■■□□□ 1.66
RBFOX1-222ENST00000585867 BCANQ96GW7 911 aa25.44■■□□□ 1.66
RBFOX1-222ENST00000585867 STRCQ7RTU9 1775 aa25.44■■□□□ 1.66
RBFOX1-222ENST00000585867 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
RBFOX1-222ENST00000585867 MYOM2P54296 1465 aa25.42■■□□□ 1.66
RBFOX1-222ENST00000585867 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
RBFOX1-222ENST00000585867 MED14O60244 1454 aa25.41■■□□□ 1.66
RBFOX1-222ENST00000585867 NRXN1Q9ULB1 1477 aa25.37■■□□□ 1.65
RBFOX1-222ENST00000585867 IQGAP1P46940 1657 aa25.36■■□□□ 1.65
RBFOX1-222ENST00000585867 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
RBFOX1-222ENST00000585867 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
RBFOX1-222ENST00000585867 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
RBFOX1-222ENST00000585867 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
RBFOX1-222ENST00000585867 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
RBFOX1-222ENST00000585867 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
RBFOX1-222ENST00000585867 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
RBFOX1-222ENST00000585867 NRXN3Q9Y4C0 1643 aa25.32■■□□□ 1.64
RBFOX1-222ENST00000585867 NBPF8Q3BBV2 869 aa25.31■■□□□ 1.64
RBFOX1-222ENST00000585867 CFAP70Q5T0N1 1121 aa25.31■■□□□ 1.64
RBFOX1-222ENST00000585867 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
RBFOX1-222ENST00000585867 C14orf93Q9H972 538 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-222ENST00000585867 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
RBFOX1-222ENST00000585867 DIP2AQ14689 1571 aa25.26■■□□□ 1.63
RBFOX1-222ENST00000585867 METP08581 1390 aa25.24■■□□□ 1.63
RBFOX1-222ENST00000585867 LAMC1P11047 1609 aa25.24■■□□□ 1.63
RBFOX1-222ENST00000585867 TMEM132EQ6IEE7 984 aa25.23■■□□□ 1.63
RBFOX1-222ENST00000585867 SETD1AO15047 1707 aaKnown RBP25.23■■□□□ 1.63
RBFOX1-222ENST00000585867 NBPF1Q3BBV0 1214 aa25.22■■□□□ 1.63
RBFOX1-222ENST00000585867 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
RBFOX1-222ENST00000585867 TRPM1Q7Z4N2 1603 aa25.2■■□□□ 1.63
RBFOX1-222ENST00000585867 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
RBFOX1-222ENST00000585867 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
RBFOX1-222ENST00000585867 ASXL1Q8IXJ9 1541 aa25.17■■□□□ 1.62
RBFOX1-222ENST00000585867 ROCK2O75116 1388 aaKnown RBP25.16■■□□□ 1.62
RBFOX1-222ENST00000585867 AMOTL2Q9Y2J4 779 aa25.16■■□□□ 1.62
RBFOX1-222ENST00000585867 PTPRUQ92729 1446 aa25.16■■□□□ 1.62
RBFOX1-222ENST00000585867 KCNA6P17658 529 aa25.15■■□□□ 1.62
RBFOX1-222ENST00000585867 STK26Q9P289 416 aa25.15■■□□□ 1.62
RBFOX1-222ENST00000585867 ADGRB1O14514 1584 aa25.15■■□□□ 1.62
RBFOX1-222ENST00000585867 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
RBFOX1-222ENST00000585867 CHD2O14647 1828 aaKnown RBP25.14■■□□□ 1.62
RBFOX1-222ENST00000585867 YTHDC2Q9H6S0 1430 aaKnown RBP25.13■■□□□ 1.61
RBFOX1-222ENST00000585867 LRPPRCP42704 1394 aaKnown RBP25.12■■□□□ 1.61
RBFOX1-222ENST00000585867 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
RBFOX1-222ENST00000585867 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
RBFOX1-222ENST00000585867 TRAK1Q9UPV9 953 aa25.1■■□□□ 1.61
RBFOX1-222ENST00000585867 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
RBFOX1-222ENST00000585867 ABCC11Q96J66 1382 aa25.09■■□□□ 1.61
RBFOX1-222ENST00000585867 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
RBFOX1-222ENST00000585867 NWD1Q149M9 1564 aa25.08■■□□□ 1.61
RBFOX1-222ENST00000585867 XRN1Q8IZH2 1706 aaKnown RBP25.07■■□□□ 1.6
RBFOX1-222ENST00000585867 TECPR2O15040 1411 aa25.04■■□□□ 1.6
RBFOX1-222ENST00000585867 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
RBFOX1-222ENST00000585867 KNDC1Q76NI1 1749 aa25.03■■□□□ 1.6
RBFOX1-222ENST00000585867 ROBO2Q9HCK4 1378 aa25.03■■□□□ 1.6
RBFOX1-222ENST00000585867 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
RBFOX1-222ENST00000585867 SIRT1Q96EB6 747 aa25.02■■□□□ 1.6
RBFOX1-222ENST00000585867 HSPA5P11021 654 aaKnown RBP25.01■■□□□ 1.59
RBFOX1-222ENST00000585867 WAPLQ7Z5K2 1190 aa25.01■■□□□ 1.59
RBFOX1-222ENST00000585867 PTCH1Q13635 1447 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 CPS1P31327 1500 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 DLC1Q96QB1 1528 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 LTBP4Q8N2S1 1624 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 DIEXFQ68CQ4 756 aaKnown RBP25■■□□□ 1.59
RBFOX1-222ENST00000585867 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
RBFOX1-222ENST00000585867 PRAM1Q96QH2 718 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 POGKQ9P215 609 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 USP47Q96K76 1375 aa25■■□□□ 1.59
RBFOX1-222ENST00000585867 FAM135BQ49AJ0 1406 aa24.98■■□□□ 1.59
RBFOX1-222ENST00000585867 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
RBFOX1-222ENST00000585867 ARHGEF28Q8N1W1 1705 aaKnown RBP24.97■■□□□ 1.59
RBFOX1-222ENST00000585867 SAFB2Q14151 953 aaKnown RBP eCLIP24.97■■□□□ 1.59
RBFOX1-222ENST00000585867 LRRC7Q96NW7 1537 aa24.96■■□□□ 1.59
RBFOX1-222ENST00000585867 EIF3AQ14152 1382 aaKnown RBP24.96■■□□□ 1.59
RBFOX1-222ENST00000585867 TMEM94Q12767 1356 aa24.95■■□□□ 1.58
RBFOX1-222ENST00000585867 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
RBFOX1-222ENST00000585867 C14orf37Q86TY3 774 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms