RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
MBD1-212ENST00000585672 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
MBD1-212ENST00000585672 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
MBD1-212ENST00000585672 NOL7Q9UMY1 257 aaKnown RBP18.74■□□□□ 0.59
MBD1-212ENST00000585672 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
MBD1-212ENST00000585672 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
MBD1-212ENST00000585672 ABCC5O15440 1437 aa18.74■□□□□ 0.59
MBD1-212ENST00000585672 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
MBD1-212ENST00000585672 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 PKD2Q13563 968 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
MBD1-212ENST00000585672 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
MBD1-212ENST00000585672 HSCBQ8IWL3 235 aa18.72■□□□□ 0.59
MBD1-212ENST00000585672 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
MBD1-212ENST00000585672 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
MBD1-212ENST00000585672 HS1BP3Q53T59 392 aa18.71■□□□□ 0.59
MBD1-212ENST00000585672 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
MBD1-212ENST00000585672 NCLP19338 710 aaKnown RBP18.71■□□□□ 0.59
MBD1-212ENST00000585672 NESP48681 1621 aa18.71■□□□□ 0.59
MBD1-212ENST00000585672 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
MBD1-212ENST00000585672 PANK3Q9H999 370 aa18.7■□□□□ 0.58
MBD1-212ENST00000585672 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
MBD1-212ENST00000585672 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
MBD1-212ENST00000585672 RAB3GAP1Q15042 981 aa18.69■□□□□ 0.58
MBD1-212ENST00000585672 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
MBD1-212ENST00000585672 SASS6Q6UVJ0 657 aa18.67■□□□□ 0.58
MBD1-212ENST00000585672 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
MBD1-212ENST00000585672 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
MBD1-212ENST00000585672 TMEM51Q9NW97 253 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 EPRSP07814 1512 aaKnown RBP18.66■□□□□ 0.58
MBD1-212ENST00000585672 PTMSP20962 102 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
MBD1-212ENST00000585672 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 GTPBP4Q9BZE4 634 aaKnown RBP18.66■□□□□ 0.58
MBD1-212ENST00000585672 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
MBD1-212ENST00000585672 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
MBD1-212ENST00000585672 KIF20AO95235 890 aa18.65■□□□□ 0.58
MBD1-212ENST00000585672 CSPP1Q1MSJ5 1256 aa18.65■□□□□ 0.58
MBD1-212ENST00000585672 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
MBD1-212ENST00000585672 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
MBD1-212ENST00000585672 KIAA0586Q9BVV6 1533 aa18.65■□□□□ 0.58
MBD1-212ENST00000585672 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.58
MBD1-212ENST00000585672 SCAPERQ9BY12 1400 aa18.64■□□□□ 0.57
MBD1-212ENST00000585672 PDLIM2Q96JY6 352 aa18.64■□□□□ 0.57
MBD1-212ENST00000585672 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
MBD1-212ENST00000585672 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
MBD1-212ENST00000585672 ZKSCAN5Q9Y2L8 839 aa18.63■□□□□ 0.57
MBD1-212ENST00000585672 PPP2R1AP30153 589 aa18.63■□□□□ 0.57
MBD1-212ENST00000585672 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
MBD1-212ENST00000585672 DISP3Q9P2K9 1392 aa18.62■□□□□ 0.57
MBD1-212ENST00000585672 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
MBD1-212ENST00000585672 E9PSI1 815 aa18.61■□□□□ 0.57
MBD1-212ENST00000585672 CBX1P83916 185 aa18.61■□□□□ 0.57
MBD1-212ENST00000585672 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
MBD1-212ENST00000585672 IPO4Q8TEX9 1081 aaKnown RBP18.61■□□□□ 0.57
MBD1-212ENST00000585672 SNX21Q969T3 373 aa18.61■□□□□ 0.57
MBD1-212ENST00000585672 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
MBD1-212ENST00000585672 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
MBD1-212ENST00000585672 LETM1O95202 739 aaPredicted RBP18.6■□□□□ 0.57
MBD1-212ENST00000585672 APAF1O14727 1248 aa18.59■□□□□ 0.57
MBD1-212ENST00000585672 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
MBD1-212ENST00000585672 CUL7Q14999 1698 aa18.59■□□□□ 0.57
MBD1-212ENST00000585672 ZNF445P59923 1031 aa18.59■□□□□ 0.57
MBD1-212ENST00000585672 RBSNQ9H1K0 784 aa18.59■□□□□ 0.57
MBD1-212ENST00000585672 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.57
MBD1-212ENST00000585672 ZNF710Q8N1W2 664 aa18.58■□□□□ 0.57
MBD1-212ENST00000585672 ANKRD30AQ9BXX3 1397 aa18.58■□□□□ 0.56
MBD1-212ENST00000585672 MCM5P33992 734 aa18.58■□□□□ 0.56
MBD1-212ENST00000585672 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
MBD1-212ENST00000585672 TESK2Q96S53 571 aa18.57■□□□□ 0.56
MBD1-212ENST00000585672 RLBP1P12271 317 aa18.57■□□□□ 0.56
MBD1-212ENST00000585672 SSFA2P28290 1259 aa18.57■□□□□ 0.56
MBD1-212ENST00000585672 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
MBD1-212ENST00000585672 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
MBD1-212ENST00000585672 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
MBD1-212ENST00000585672 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
MBD1-212ENST00000585672 TSC1Q92574 1164 aa18.56■□□□□ 0.56
MBD1-212ENST00000585672 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
MBD1-212ENST00000585672 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
MBD1-212ENST00000585672 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
MBD1-212ENST00000585672 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
MBD1-212ENST00000585672 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
MBD1-212ENST00000585672 MYRIPQ8NFW9 859 aa18.55■□□□□ 0.56
MBD1-212ENST00000585672 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
MBD1-212ENST00000585672 VGLL3A8MV65 326 aa18.54■□□□□ 0.56
MBD1-212ENST00000585672 GOLGA6L22H0YM25 854 aa18.54■□□□□ 0.56
MBD1-212ENST00000585672 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
MBD1-212ENST00000585672 CLEC17AQ6ZS10 378 aa18.53■□□□□ 0.56
MBD1-212ENST00000585672 ZNF830Q96NB3 372 aaPredicted RBP18.53■□□□□ 0.56
MBD1-212ENST00000585672 TAF7LQ5H9L4 462 aa18.53■□□□□ 0.56
MBD1-212ENST00000585672 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.56
MBD1-212ENST00000585672 CD2BP2O95400 341 aaKnown RBP18.52■□□□□ 0.55
MBD1-212ENST00000585672 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
MBD1-212ENST00000585672 CAVIN1Q6NZI2 390 aaKnown RBP18.51■□□□□ 0.55
MBD1-212ENST00000585672 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms