RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 RIMS2Q9UQ26 1411 aa24.46■■□□□ 1.51
GFAP-205ENST00000585543 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
GFAP-205ENST00000585543 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
GFAP-205ENST00000585543 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
GFAP-205ENST00000585543 NPHP4O75161 1426 aaPredicted RBP24.43■■□□□ 1.5
GFAP-205ENST00000585543 ZFYVE9O95405 1425 aa24.42■■□□□ 1.5
GFAP-205ENST00000585543 MED14O60244 1454 aa24.41■■□□□ 1.5
GFAP-205ENST00000585543 RPGRIP1LQ68CZ1 1315 aa24.4■■□□□ 1.5
GFAP-205ENST00000585543 BCANQ96GW7 911 aa24.4■■□□□ 1.5
GFAP-205ENST00000585543 LTKP29376 864 aa24.38■■□□□ 1.49
GFAP-205ENST00000585543 PPLO60437 1756 aa24.37■■□□□ 1.49
GFAP-205ENST00000585543 NEXMIFQ5QGS0 1516 aa24.37■■□□□ 1.49
GFAP-205ENST00000585543 RGL3Q3MIN7 710 aa24.37■■□□□ 1.49
GFAP-205ENST00000585543 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
GFAP-205ENST00000585543 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
GFAP-205ENST00000585543 VGFO15240 615 aaPredicted RBP24.34■■□□□ 1.49
GFAP-205ENST00000585543 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
GFAP-205ENST00000585543 IFT172Q9UG01 1749 aa24.32■■□□□ 1.48
GFAP-205ENST00000585543 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
GFAP-205ENST00000585543 SETBP1Q9Y6X0 1596 aa24.25■■□□□ 1.47
GFAP-205ENST00000585543 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
GFAP-205ENST00000585543 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
GFAP-205ENST00000585543 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
GFAP-205ENST00000585543 MYOM2P54296 1465 aa24.24■■□□□ 1.47
GFAP-205ENST00000585543 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
GFAP-205ENST00000585543 SLC26A8Q96RN1 970 aa24.23■■□□□ 1.47
GFAP-205ENST00000585543 CLSPNQ9HAW4 1339 aa24.22■■□□□ 1.47
GFAP-205ENST00000585543 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
GFAP-205ENST00000585543 DCAF11Q8TEB1 546 aa24.2■■□□□ 1.46
GFAP-205ENST00000585543 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
GFAP-205ENST00000585543 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
GFAP-205ENST00000585543 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
GFAP-205ENST00000585543 LAMC1P11047 1609 aa24.17■■□□□ 1.46
GFAP-205ENST00000585543 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
GFAP-205ENST00000585543 ADGRF5Q8IZF2 1346 aa24.17■■□□□ 1.46
GFAP-205ENST00000585543 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
GFAP-205ENST00000585543 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
GFAP-205ENST00000585543 PIK3R4Q99570 1358 aa24.16■■□□□ 1.46
GFAP-205ENST00000585543 CPS1P31327 1500 aa24.16■■□□□ 1.46
GFAP-205ENST00000585543 ALKQ9UM73 1620 aa24.15■■□□□ 1.46
GFAP-205ENST00000585543 PIK3C2GO75747 1445 aa24.15■■□□□ 1.46
GFAP-205ENST00000585543 CHD2O14647 1828 aaKnown RBP24.14■■□□□ 1.45
GFAP-205ENST00000585543 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
GFAP-205ENST00000585543 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
GFAP-205ENST00000585543 LTBP4Q8N2S1 1624 aa24.11■■□□□ 1.45
GFAP-205ENST00000585543 SETD1AO15047 1707 aaKnown RBP24.11■■□□□ 1.45
GFAP-205ENST00000585543 KCNA6P17658 529 aa24.11■■□□□ 1.45
GFAP-205ENST00000585543 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
GFAP-205ENST00000585543 L3MBTL2Q969R5 705 aa24.09■■□□□ 1.45
GFAP-205ENST00000585543 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.45
GFAP-205ENST00000585543 METP08581 1390 aa24.05■■□□□ 1.44
GFAP-205ENST00000585543 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
GFAP-205ENST00000585543 KIAA1210Q9ULL0 1709 aa24.04■■□□□ 1.44
GFAP-205ENST00000585543 C14orf93Q9H972 538 aaKnown RBP24.04■■□□□ 1.44
GFAP-205ENST00000585543 AMOTL2Q9Y2J4 779 aa24.04■■□□□ 1.44
GFAP-205ENST00000585543 PRAG1Q86YV5 1406 aa24.03■■□□□ 1.44
GFAP-205ENST00000585543 IQSEC2Q5JU85 1478 aa24.03■■□□□ 1.44
GFAP-205ENST00000585543 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
GFAP-205ENST00000585543 CFAP70Q5T0N1 1121 aa24.02■■□□□ 1.44
GFAP-205ENST00000585543 PROSER2Q86WR7 435 aaPredicted RBP24.02■■□□□ 1.44
GFAP-205ENST00000585543 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
GFAP-205ENST00000585543 PTPRUQ92729 1446 aa24■■□□□ 1.43
GFAP-205ENST00000585543 LRRC7Q96NW7 1537 aa24■■□□□ 1.43
GFAP-205ENST00000585543 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
GFAP-205ENST00000585543 LRPPRCP42704 1394 aaKnown RBP23.97■■□□□ 1.43
GFAP-205ENST00000585543 ASXL1Q8IXJ9 1541 aa23.97■■□□□ 1.43
GFAP-205ENST00000585543 PTCH1Q13635 1447 aa23.96■■□□□ 1.43
GFAP-205ENST00000585543 YTHDC2Q9H6S0 1430 aaKnown RBP23.96■■□□□ 1.43
GFAP-205ENST00000585543 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
GFAP-205ENST00000585543 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
GFAP-205ENST00000585543 TMEM94Q12767 1356 aa23.95■■□□□ 1.42
GFAP-205ENST00000585543 STK26Q9P289 416 aa23.95■■□□□ 1.42
GFAP-205ENST00000585543 TRPM1Q7Z4N2 1603 aa23.94■■□□□ 1.42
GFAP-205ENST00000585543 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
GFAP-205ENST00000585543 XIRP1Q702N8 1843 aaKnown RBP23.93■■□□□ 1.42
GFAP-205ENST00000585543 ABCC11Q96J66 1382 aa23.92■■□□□ 1.42
GFAP-205ENST00000585543 ADGRB1O14514 1584 aa23.92■■□□□ 1.42
GFAP-205ENST00000585543 TECPR2O15040 1411 aa23.92■■□□□ 1.42
GFAP-205ENST00000585543 MSH6P52701 1360 aa23.91■■□□□ 1.42
GFAP-205ENST00000585543 ROCK2O75116 1388 aaKnown RBP23.9■■□□□ 1.42
GFAP-205ENST00000585543 DLC1Q96QB1 1528 aa23.89■■□□□ 1.41
GFAP-205ENST00000585543 ROBO2Q9HCK4 1378 aa23.88■■□□□ 1.41
GFAP-205ENST00000585543 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
GFAP-205ENST00000585543 RBM33Q96EV2 1170 aaKnown RBP23.86■■□□□ 1.41
GFAP-205ENST00000585543 SIRT1Q96EB6 747 aa23.85■■□□□ 1.41
GFAP-205ENST00000585543 POGKQ9P215 609 aa23.85■■□□□ 1.41
GFAP-205ENST00000585543 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
GFAP-205ENST00000585543 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
GFAP-205ENST00000585543 TOM1O60784 492 aa23.84■■□□□ 1.41
GFAP-205ENST00000585543 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
GFAP-205ENST00000585543 UBAP1LF5GYI3 381 aa23.83■■□□□ 1.41
GFAP-205ENST00000585543 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
GFAP-205ENST00000585543 NBPF8Q3BBV2 869 aa23.83■■□□□ 1.41
GFAP-205ENST00000585543 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
GFAP-205ENST00000585543 NALCNQ8IZF0 1738 aa23.83■■□□□ 1.41
GFAP-205ENST00000585543 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
GFAP-205ENST00000585543 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.81■■□□□ 1.4
GFAP-205ENST00000585543 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
GFAP-205ENST00000585543 ATF3P18847 181 aa23.81■■□□□ 1.4
GFAP-205ENST00000585543 DCCP43146 1447 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms