RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
SPC24-202ENST00000585486 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
SPC24-202ENST00000585486 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
SPC24-202ENST00000585486 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
SPC24-202ENST00000585486 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
SPC24-202ENST00000585486 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
SPC24-202ENST00000585486 GPRASP1Q5JY77 1395 aa19.15■□□□□ 0.66
SPC24-202ENST00000585486 TMEM2Q9UHN6 1383 aa19.15■□□□□ 0.66
SPC24-202ENST00000585486 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
SPC24-202ENST00000585486 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.66
SPC24-202ENST00000585486 RIMS2Q9UQ26 1411 aa19.14■□□□□ 0.65
SPC24-202ENST00000585486 CEP170BQ9Y4F5 1589 aaPredicted RBP19.14■□□□□ 0.65
SPC24-202ENST00000585486 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.65
SPC24-202ENST00000585486 SLIT1O75093 1534 aa19.13■□□□□ 0.65
SPC24-202ENST00000585486 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
SPC24-202ENST00000585486 NBPF1Q3BBV0 1214 aa19.12■□□□□ 0.65
SPC24-202ENST00000585486 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
SPC24-202ENST00000585486 NUTM2DQ5VT03 806 aaPredicted RBP19.1■□□□□ 0.65
SPC24-202ENST00000585486 C14orf93Q9H972 538 aaKnown RBP19.1■□□□□ 0.65
SPC24-202ENST00000585486 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
SPC24-202ENST00000585486 KIAA1210Q9ULL0 1709 aa19.09■□□□□ 0.65
SPC24-202ENST00000585486 LTKP29376 864 aa19.08■□□□□ 0.64
SPC24-202ENST00000585486 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
SPC24-202ENST00000585486 THEMISQ8N1K5 641 aaPredicted RBP19.07■□□□□ 0.64
SPC24-202ENST00000585486 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
SPC24-202ENST00000585486 LAMC1P11047 1609 aa19.06■□□□□ 0.64
SPC24-202ENST00000585486 NRXN3Q9Y4C0 1643 aa19.06■□□□□ 0.64
SPC24-202ENST00000585486 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
SPC24-202ENST00000585486 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
SPC24-202ENST00000585486 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
SPC24-202ENST00000585486 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
SPC24-202ENST00000585486 MED14O60244 1454 aa19.03■□□□□ 0.64
SPC24-202ENST00000585486 PLEKHG1Q9ULL1 1385 aa19.02■□□□□ 0.64
SPC24-202ENST00000585486 ALKQ9UM73 1620 aa19.01■□□□□ 0.63
SPC24-202ENST00000585486 SETD1AO15047 1707 aaKnown RBP19.01■□□□□ 0.63
SPC24-202ENST00000585486 HSPA5P11021 654 aaKnown RBP19.01■□□□□ 0.63
SPC24-202ENST00000585486 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
SPC24-202ENST00000585486 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
SPC24-202ENST00000585486 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
SPC24-202ENST00000585486 TXNDC2Q86VQ3 553 aa19■□□□□ 0.63
SPC24-202ENST00000585486 SCAF11Q99590 1463 aaKnown RBP18.99■□□□□ 0.63
SPC24-202ENST00000585486 USP47Q96K76 1375 aa18.99■□□□□ 0.63
SPC24-202ENST00000585486 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
SPC24-202ENST00000585486 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPC24-202ENST00000585486 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
SPC24-202ENST00000585486 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
SPC24-202ENST00000585486 TMEM132EQ6IEE7 984 aa18.96■□□□□ 0.63
SPC24-202ENST00000585486 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
SPC24-202ENST00000585486 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
SPC24-202ENST00000585486 METP08581 1390 aa18.93■□□□□ 0.62
SPC24-202ENST00000585486 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
SPC24-202ENST00000585486 TESK2Q96S53 571 aa18.92■□□□□ 0.62
SPC24-202ENST00000585486 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
SPC24-202ENST00000585486 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
SPC24-202ENST00000585486 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
SPC24-202ENST00000585486 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
SPC24-202ENST00000585486 YTHDC2Q9H6S0 1430 aaKnown RBP18.91■□□□□ 0.62
SPC24-202ENST00000585486 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
SPC24-202ENST00000585486 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
SPC24-202ENST00000585486 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
SPC24-202ENST00000585486 PTPRUQ92729 1446 aa18.88■□□□□ 0.61
SPC24-202ENST00000585486 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
SPC24-202ENST00000585486 TECPR2O15040 1411 aa18.87■□□□□ 0.61
SPC24-202ENST00000585486 HSPA2P54652 639 aa18.87■□□□□ 0.61
SPC24-202ENST00000585486 SLC26A8Q96RN1 970 aa18.87■□□□□ 0.61
SPC24-202ENST00000585486 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
SPC24-202ENST00000585486 DLC1Q96QB1 1528 aa18.85■□□□□ 0.61
SPC24-202ENST00000585486 TRAK1Q9UPV9 953 aa18.85■□□□□ 0.61
SPC24-202ENST00000585486 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
SPC24-202ENST00000585486 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
SPC24-202ENST00000585486 WASHC2AQ641Q2 1341 aa18.84■□□□□ 0.61
SPC24-202ENST00000585486 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
SPC24-202ENST00000585486 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
SPC24-202ENST00000585486 PIK3R4Q99570 1358 aa18.82■□□□□ 0.6
SPC24-202ENST00000585486 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
SPC24-202ENST00000585486 KNDC1Q76NI1 1749 aa18.81■□□□□ 0.6
SPC24-202ENST00000585486 STK26Q9P289 416 aa18.81■□□□□ 0.6
SPC24-202ENST00000585486 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
SPC24-202ENST00000585486 CPS1P31327 1500 aa18.8■□□□□ 0.6
SPC24-202ENST00000585486 CENPJQ9HC77 1338 aaPredicted RBP18.8■□□□□ 0.6
SPC24-202ENST00000585486 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
SPC24-202ENST00000585486 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
SPC24-202ENST00000585486 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
SPC24-202ENST00000585486 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
SPC24-202ENST00000585486 BCANQ96GW7 911 aa18.79■□□□□ 0.6
SPC24-202ENST00000585486 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
SPC24-202ENST00000585486 ROBO2Q9HCK4 1378 aa18.79■□□□□ 0.6
SPC24-202ENST00000585486 PLEKHH1Q9ULM0 1364 aa18.79■□□□□ 0.6
SPC24-202ENST00000585486 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
SPC24-202ENST00000585486 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
SPC24-202ENST00000585486 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
SPC24-202ENST00000585486 CHD2O14647 1828 aaKnown RBP18.75■□□□□ 0.59
SPC24-202ENST00000585486 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
SPC24-202ENST00000585486 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
SPC24-202ENST00000585486 NWD1Q149M9 1564 aa18.73■□□□□ 0.59
SPC24-202ENST00000585486 TULP4Q9NRJ4 1543 aa18.73■□□□□ 0.59
SPC24-202ENST00000585486 KCNA6P17658 529 aa18.72■□□□□ 0.59
SPC24-202ENST00000585486 TMF1P82094 1093 aa18.71■□□□□ 0.59
SPC24-202ENST00000585486 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
SPC24-202ENST00000585486 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms