RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	FAM135B	Q49AJ0	1406 aa		25.14	■■□□□ 1.62
PRKAR1A-206	ENST00000585460	ADGRB3	O60242	1522 aa		25.13	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	ITGAE	P38570	1179 aa		25.13	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	CHGA	P10645	457 aa	Known RBP	25.12	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	ZFYVE9	O95405	1425 aa		25.12	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	PPP1R15A	O75807	674 aa	Predicted RBP	25.11	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	RIMS2	Q9UQ26	1411 aa		25.11	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	PLEKHG1	Q9ULL1	1385 aa		25.1	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	TBX22	Q9Y458	520 aa		25.1	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	NUTM2D	Q5VT03	806 aa	Predicted RBP	25.08	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	25.08	■■□□□ 1.61
PRKAR1A-206	ENST00000585460	NUP155	O75694	1391 aa		25.07	■■□□□ 1.6
PRKAR1A-206	ENST00000585460	RGS17	Q9UGC6	210 aa	Predicted RBP	25.06	■■□□□ 1.6
PRKAR1A-206	ENST00000585460	XIRP1	Q702N8	1843 aa	Known RBP	25.06	■■□□□ 1.6
PRKAR1A-206	ENST00000585460	SLAIN2	Q9P270	581 aa		25.05	■■□□□ 1.6
PRKAR1A-206	ENST00000585460	NKTR	P30414	1462 aa	Known RBP	25.02	■■□□□ 1.6
PRKAR1A-206	ENST00000585460	TMEM131L	A2VDJ0	1609 aa		25.01	■■□□□ 1.59
PRKAR1A-206	ENST00000585460	MSH6	P52701	1360 aa		25.01	■■□□□ 1.59
PRKAR1A-206	ENST00000585460	UNC13B	O14795	1591 aa		25.01	■■□□□ 1.59
PRKAR1A-206	ENST00000585460	NWD1	Q149M9	1564 aa		24.97	■■□□□ 1.59
PRKAR1A-206	ENST00000585460	ADAMTS13	Q76LX8	1427 aa		24.97	■■□□□ 1.59
PRKAR1A-206	ENST00000585460		E9PCH4	1651 aa		24.94	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	GCC2	Q8IWJ2	1684 aa		24.94	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	NCOA3	Q9Y6Q9	1424 aa		24.93	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	C14orf37	Q86TY3	774 aa		24.92	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	C19orf44	Q9H6X5	657 aa		24.92	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	AMOTL2	Q9Y2J4	779 aa		24.92	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	IQGAP3	Q86VI3	1631 aa		24.92	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	PIK3R4	Q99570	1358 aa		24.91	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	MYO5B	Q9ULV0	1848 aa		24.9	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	ROBO1	Q9Y6N7	1651 aa		24.89	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	POTEA	Q6S8J7	498 aa		24.89	■■□□□ 1.58
PRKAR1A-206	ENST00000585460	CHD2	O14647	1828 aa	Known RBP	24.88	■■□□□ 1.57
PRKAR1A-206	ENST00000585460	CADPS2	Q86UW7	1296 aa		24.87	■■□□□ 1.57
PRKAR1A-206	ENST00000585460	ATF3	P18847	181 aa		24.86	■■□□□ 1.57
PRKAR1A-206	ENST00000585460	ZNF326	Q5BKZ1	582 aa	Known RBP	24.86	■■□□□ 1.57
PRKAR1A-206	ENST00000585460	PTPRU	Q92729	1446 aa		24.86	■■□□□ 1.57
PRKAR1A-206	ENST00000585460	JCAD	Q9P266	1359 aa		24.82	■■□□□ 1.56
PRKAR1A-206	ENST00000585460	RRBP1	Q9P2E9	1410 aa	Known RBP	24.81	■■□□□ 1.56
PRKAR1A-206	ENST00000585460	DIP2A	Q14689	1571 aa		24.79	■■□□□ 1.56
PRKAR1A-206	ENST00000585460	NAIP	Q13075	1403 aa		24.78	■■□□□ 1.56
PRKAR1A-206	ENST00000585460	MET	P08581	1390 aa		24.78	■■□□□ 1.56
PRKAR1A-206	ENST00000585460	TRPM2	O94759	1503 aa		24.76	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	BRINP3	Q76B58	766 aa		24.76	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	TRIM52	Q96A61	297 aa		24.75	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	SPATA31A6	Q5VVP1	1343 aa		24.72	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	PHLPP1	O60346	1717 aa		24.72	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	24.71	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	SETBP1	Q9Y6X0	1596 aa		24.71	■■□□□ 1.55
PRKAR1A-206	ENST00000585460	COL16A1	Q07092	1604 aa	Predicted RBP	24.68	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	VGF	O15240	615 aa	Predicted RBP	24.68	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	SLC4A1AP	Q9BWU0	796 aa	Known RBP	24.68	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	NRXN3	Q9Y4C0	1643 aa		24.68	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	DCC	P43146	1447 aa		24.67	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	SPHKAP	Q2M3C7	1700 aa		24.66	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	MEX3C	Q5U5Q3	659 aa	Known RBP	24.66	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	HFM1	A2PYH4	1435 aa		24.65	■■□□□ 1.54
PRKAR1A-206	ENST00000585460	LRP6	O75581	1613 aa		24.64	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	CLTCL1	P53675	1640 aa		24.64	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	AHDC1	Q5TGY3	1603 aa	Predicted RBP	24.64	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	RPGRIP1L	Q68CZ1	1315 aa		24.63	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	MST1R	Q04912	1400 aa		24.63	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	NEXMIF	Q5QGS0	1516 aa		24.63	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	NUTM2B	A6NNL0	878 aa	Predicted RBP	24.62	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	NUTM2E	B1AL46	878 aa	Predicted RBP	24.62	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	NUTM2A	Q8IVF1	878 aa	Predicted RBP	24.62	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	DDX17	Q92841	729 aa	Known RBP	24.62	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	XRN1	Q8IZH2	1706 aa	Known RBP	24.61	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	ZNF772	Q68DY9	489 aa	Predicted RBP	24.61	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	FOXD1	Q16676	465 aa		24.6	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	LRRC59	Q96AG4	307 aa	Known RBP	24.6	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	ADGRL3	Q9HAR2	1447 aa		24.59	■■□□□ 1.53
PRKAR1A-206	ENST00000585460	SETD5	Q9C0A6	1442 aa		24.57	■■□□□ 1.52
PRKAR1A-206	ENST00000585460	ASXL1	Q8IXJ9	1541 aa		24.56	■■□□□ 1.52
PRKAR1A-206	ENST00000585460	ROBO2	Q9HCK4	1378 aa		24.56	■■□□□ 1.52
PRKAR1A-206	ENST00000585460	ORAI2	Q96SN7	254 aa		24.53	■■□□□ 1.52
PRKAR1A-206	ENST00000585460	C1orf167	Q5SNV9	1468 aa		24.51	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	RXRB	P28702	533 aa		24.51	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	MPHOSPH9	Q99550	1183 aa		24.51	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	RGL3	Q3MIN7	710 aa		24.5	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	AFF2	P51816	1311 aa		24.49	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	ADGRF5	Q8IZF2	1346 aa		24.49	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	PTCH1	Q13635	1447 aa		24.49	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	SHPRH	Q149N8	1683 aa		24.49	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	KIF1B	O60333	1816 aa		24.47	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	PNPLA6	Q8IY17	1366 aa		24.47	■■□□□ 1.51
PRKAR1A-206	ENST00000585460	SOS2	Q07890	1332 aa	Predicted RBP	24.45	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	UPF1	Q92900	1129 aa	Known RBP eCLIP	24.45	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	C8orf37	Q96NL8	207 aa		24.45	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	PRAG1	Q86YV5	1406 aa		24.44	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	QTRT2	Q9H974	415 aa	Known RBP	24.44	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	STK26	Q9P289	416 aa		24.43	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	CCDC144A	A2RUR9	1427 aa		24.42	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	ADAMTS2	O95450	1211 aa		24.41	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	WAPL	Q7Z5K2	1190 aa		24.41	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	NHSL1	Q5SYE7	1610 aa		24.41	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	SPATA31E1	Q6ZUB1	1445 aa		24.41	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	NALCN	Q8IZF0	1738 aa		24.41	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	TMEM132E	Q6IEE7	984 aa		24.4	■■□□□ 1.5
PRKAR1A-206	ENST00000585460	NGLY1	Q96IV0	654 aa		24.4	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms