RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MYOM2P54296 1465 aa18.51■□□□□ 0.55
TRIM47-202ENST00000585333 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
TRIM47-202ENST00000585333 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
TRIM47-202ENST00000585333 DCAF11Q8TEB1 546 aa18.49■□□□□ 0.55
TRIM47-202ENST00000585333 EID1Q9Y6B2 187 aa18.49■□□□□ 0.55
TRIM47-202ENST00000585333 TMEM2Q9UHN6 1383 aa18.47■□□□□ 0.55
TRIM47-202ENST00000585333 SLIT1O75093 1534 aa18.46■□□□□ 0.55
TRIM47-202ENST00000585333 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-202ENST00000585333 RIMS2Q9UQ26 1411 aa18.46■□□□□ 0.55
TRIM47-202ENST00000585333 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
TRIM47-202ENST00000585333 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
TRIM47-202ENST00000585333 PPLO60437 1756 aa18.44■□□□□ 0.54
TRIM47-202ENST00000585333 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
TRIM47-202ENST00000585333 PRAG1Q86YV5 1406 aa18.41■□□□□ 0.54
TRIM47-202ENST00000585333 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
TRIM47-202ENST00000585333 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
TRIM47-202ENST00000585333 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
TRIM47-202ENST00000585333 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
TRIM47-202ENST00000585333 LAMC1P11047 1609 aa18.4■□□□□ 0.54
TRIM47-202ENST00000585333 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.54
TRIM47-202ENST00000585333 TXNDC2Q86VQ3 553 aa18.38■□□□□ 0.53
TRIM47-202ENST00000585333 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
TRIM47-202ENST00000585333 KIAA1210Q9ULL0 1709 aa18.37■□□□□ 0.53
TRIM47-202ENST00000585333 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
TRIM47-202ENST00000585333 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
TRIM47-202ENST00000585333 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
TRIM47-202ENST00000585333 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
TRIM47-202ENST00000585333 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
TRIM47-202ENST00000585333 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.53
TRIM47-202ENST00000585333 ROCK2O75116 1388 aaKnown RBP18.32■□□□□ 0.52
TRIM47-202ENST00000585333 BCANQ96GW7 911 aa18.32■□□□□ 0.52
TRIM47-202ENST00000585333 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
TRIM47-202ENST00000585333 MED14O60244 1454 aa18.31■□□□□ 0.52
TRIM47-202ENST00000585333 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
TRIM47-202ENST00000585333 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-202ENST00000585333 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
TRIM47-202ENST00000585333 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
TRIM47-202ENST00000585333 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
TRIM47-202ENST00000585333 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
TRIM47-202ENST00000585333 LTKP29376 864 aa18.28■□□□□ 0.52
TRIM47-202ENST00000585333 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
TRIM47-202ENST00000585333 PIK3R4Q99570 1358 aa18.28■□□□□ 0.52
TRIM47-202ENST00000585333 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-202ENST00000585333 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-202ENST00000585333 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
TRIM47-202ENST00000585333 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
TRIM47-202ENST00000585333 ALKQ9UM73 1620 aa18.26■□□□□ 0.51
TRIM47-202ENST00000585333 CFAP70Q5T0N1 1121 aa18.25■□□□□ 0.51
TRIM47-202ENST00000585333 IQGAP1P46940 1657 aa18.24■□□□□ 0.51
TRIM47-202ENST00000585333 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRIM47-202ENST00000585333 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
TRIM47-202ENST00000585333 NRXN3Q9Y4C0 1643 aa18.21■□□□□ 0.51
TRIM47-202ENST00000585333 ADGRB1O14514 1584 aa18.2■□□□□ 0.5
TRIM47-202ENST00000585333 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
TRIM47-202ENST00000585333 USP47Q96K76 1375 aa18.19■□□□□ 0.5
TRIM47-202ENST00000585333 HSPA2P54652 639 aa18.19■□□□□ 0.5
TRIM47-202ENST00000585333 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
TRIM47-202ENST00000585333 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
TRIM47-202ENST00000585333 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
TRIM47-202ENST00000585333 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
TRIM47-202ENST00000585333 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
TRIM47-202ENST00000585333 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
TRIM47-202ENST00000585333 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
TRIM47-202ENST00000585333 SLC26A8Q96RN1 970 aa18.16■□□□□ 0.5
TRIM47-202ENST00000585333 TECPR2O15040 1411 aa18.15■□□□□ 0.5
TRIM47-202ENST00000585333 FBXO41Q8TF61 875 aa18.14■□□□□ 0.49
TRIM47-202ENST00000585333 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
TRIM47-202ENST00000585333 METP08581 1390 aa18.14■□□□□ 0.49
TRIM47-202ENST00000585333 FAM135BQ49AJ0 1406 aa18.14■□□□□ 0.49
TRIM47-202ENST00000585333 TMEM132EQ6IEE7 984 aa18.13■□□□□ 0.49
TRIM47-202ENST00000585333 PTCH1Q13635 1447 aa18.13■□□□□ 0.49
TRIM47-202ENST00000585333 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
TRIM47-202ENST00000585333 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
TRIM47-202ENST00000585333 CPS1P31327 1500 aa18.12■□□□□ 0.49
TRIM47-202ENST00000585333 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
TRIM47-202ENST00000585333 TRAK1Q9UPV9 953 aa18.11■□□□□ 0.49
TRIM47-202ENST00000585333 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-202ENST00000585333 NKTRP30414 1462 aaKnown RBP18.1■□□□□ 0.49
TRIM47-202ENST00000585333 KCNA6P17658 529 aa18.1■□□□□ 0.49
TRIM47-202ENST00000585333 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
TRIM47-202ENST00000585333 POGKQ9P215 609 aa18.1■□□□□ 0.49
TRIM47-202ENST00000585333 HSPA5P11021 654 aaKnown RBP18.09■□□□□ 0.49
TRIM47-202ENST00000585333 STK26Q9P289 416 aa18.09■□□□□ 0.49
TRIM47-202ENST00000585333 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
TRIM47-202ENST00000585333 NWD1Q149M9 1564 aa18.08■□□□□ 0.49
TRIM47-202ENST00000585333 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-202ENST00000585333 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
TRIM47-202ENST00000585333 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
TRIM47-202ENST00000585333 ARHGEF28Q8N1W1 1705 aaKnown RBP18.07■□□□□ 0.48
TRIM47-202ENST00000585333 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
TRIM47-202ENST00000585333 TMF1P82094 1093 aa18.06■□□□□ 0.48
TRIM47-202ENST00000585333 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
TRIM47-202ENST00000585333 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-202ENST00000585333 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
TRIM47-202ENST00000585333 PTPRUQ92729 1446 aa18.04■□□□□ 0.48
TRIM47-202ENST00000585333 EVC2Q86UK5 1308 aa18.02■□□□□ 0.48
TRIM47-202ENST00000585333 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
TRIM47-202ENST00000585333 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.47
TRIM47-202ENST00000585333 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
TRIM47-202ENST00000585333 TESK2Q96S53 571 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms