RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 E9PCH4 1651 aa20.43■□□□□ 0.86
PRKCSH-201ENST00000585325 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
PRKCSH-201ENST00000585325 MYO5BQ9ULV0 1848 aa20.41■□□□□ 0.86
PRKCSH-201ENST00000585325 NUP155O75694 1391 aa20.4■□□□□ 0.86
PRKCSH-201ENST00000585325 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
PRKCSH-201ENST00000585325 BCANQ96GW7 911 aa20.39■□□□□ 0.85
PRKCSH-201ENST00000585325 SLC26A8Q96RN1 970 aa20.39■□□□□ 0.85
PRKCSH-201ENST00000585325 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
PRKCSH-201ENST00000585325 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-201ENST00000585325 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-201ENST00000585325 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-201ENST00000585325 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
PRKCSH-201ENST00000585325 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
PRKCSH-201ENST00000585325 HDGFP51858 240 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-201ENST00000585325 KCNA6P17658 529 aa20.33■□□□□ 0.85
PRKCSH-201ENST00000585325 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
PRKCSH-201ENST00000585325 PLEKHG1Q9ULL1 1385 aa20.32■□□□□ 0.84
PRKCSH-201ENST00000585325 SETD1AO15047 1707 aaKnown RBP20.31■□□□□ 0.84
PRKCSH-201ENST00000585325 ROBO1Q9Y6N7 1651 aa20.31■□□□□ 0.84
PRKCSH-201ENST00000585325 NWD1Q149M9 1564 aa20.29■□□□□ 0.84
PRKCSH-201ENST00000585325 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-201ENST00000585325 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
PRKCSH-201ENST00000585325 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
PRKCSH-201ENST00000585325 NUTM2DQ5VT03 806 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-201ENST00000585325 NKTRP30414 1462 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-201ENST00000585325 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-201ENST00000585325 NAIPQ13075 1403 aa20.26■□□□□ 0.83
PRKCSH-201ENST00000585325 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-201ENST00000585325 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
PRKCSH-201ENST00000585325 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
PRKCSH-201ENST00000585325 JCADQ9P266 1359 aa20.21■□□□□ 0.83
PRKCSH-201ENST00000585325 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
PRKCSH-201ENST00000585325 MSH6P52701 1360 aa20.2■□□□□ 0.82
PRKCSH-201ENST00000585325 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
PRKCSH-201ENST00000585325 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
PRKCSH-201ENST00000585325 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-201ENST00000585325 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
PRKCSH-201ENST00000585325 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
PRKCSH-201ENST00000585325 TRPM2O94759 1503 aa20.17■□□□□ 0.82
PRKCSH-201ENST00000585325 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
PRKCSH-201ENST00000585325 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
PRKCSH-201ENST00000585325 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
PRKCSH-201ENST00000585325 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
PRKCSH-201ENST00000585325 KIF1BO60333 1816 aa20.13■□□□□ 0.81
PRKCSH-201ENST00000585325 LRP6O75581 1613 aa20.13■□□□□ 0.81
PRKCSH-201ENST00000585325 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-201ENST00000585325 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
PRKCSH-201ENST00000585325 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
PRKCSH-201ENST00000585325 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
PRKCSH-201ENST00000585325 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-201ENST00000585325 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
PRKCSH-201ENST00000585325 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
PRKCSH-201ENST00000585325 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
PRKCSH-201ENST00000585325 SPATA31A6Q5VVP1 1343 aa20.09■□□□□ 0.81
PRKCSH-201ENST00000585325 MEX3CQ5U5Q3 659 aaKnown RBP20.09■□□□□ 0.81
PRKCSH-201ENST00000585325 ZNF772Q68DY9 489 aaPredicted RBP20.09■□□□□ 0.81
PRKCSH-201ENST00000585325 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-201ENST00000585325 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-201ENST00000585325 ATF3P18847 181 aa20.05■□□□□ 0.8
PRKCSH-201ENST00000585325 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
PRKCSH-201ENST00000585325 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
PRKCSH-201ENST00000585325 METP08581 1390 aa20.04■□□□□ 0.8
PRKCSH-201ENST00000585325 FOXD1Q16676 465 aa20.02■□□□□ 0.8
PRKCSH-201ENST00000585325 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.79
PRKCSH-201ENST00000585325 RXRBP28702 533 aa20.01■□□□□ 0.79
PRKCSH-201ENST00000585325 SHPRHQ149N8 1683 aa20■□□□□ 0.79
PRKCSH-201ENST00000585325 VGFO15240 615 aaPredicted RBP19.99■□□□□ 0.79
PRKCSH-201ENST00000585325 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
PRKCSH-201ENST00000585325 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-201ENST00000585325 PPLO60437 1756 aa19.98■□□□□ 0.79
PRKCSH-201ENST00000585325 DCCP43146 1447 aa19.97■□□□□ 0.79
PRKCSH-201ENST00000585325 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
PRKCSH-201ENST00000585325 CCDC144AA2RUR9 1427 aa19.95■□□□□ 0.78
PRKCSH-201ENST00000585325 NUTM2BA6NNL0 878 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-201ENST00000585325 NUTM2EB1AL46 878 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-201ENST00000585325 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-201ENST00000585325 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
PRKCSH-201ENST00000585325 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
PRKCSH-201ENST00000585325 BRINP3Q76B58 766 aa19.92■□□□□ 0.78
PRKCSH-201ENST00000585325 AFF2P51816 1311 aa19.92■□□□□ 0.78
PRKCSH-201ENST00000585325 MST1RQ04912 1400 aa19.92■□□□□ 0.78
PRKCSH-201ENST00000585325 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
PRKCSH-201ENST00000585325 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
PRKCSH-201ENST00000585325 PTCH1Q13635 1447 aa19.9■□□□□ 0.78
PRKCSH-201ENST00000585325 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
PRKCSH-201ENST00000585325 RGS12O14924 1447 aa19.89■□□□□ 0.77
PRKCSH-201ENST00000585325 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-201ENST00000585325 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
PRKCSH-201ENST00000585325 ROBO2Q9HCK4 1378 aa19.87■□□□□ 0.77
PRKCSH-201ENST00000585325 IFT172Q9UG01 1749 aa19.87■□□□□ 0.77
PRKCSH-201ENST00000585325 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
PRKCSH-201ENST00000585325 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
PRKCSH-201ENST00000585325 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
PRKCSH-201ENST00000585325 ANKRD30BQ9BXX2 1392 aa19.84■□□□□ 0.77
PRKCSH-201ENST00000585325 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
PRKCSH-201ENST00000585325 RBM6P78332 1123 aaKnown RBP19.83■□□□□ 0.77
PRKCSH-201ENST00000585325 C8orf37Q96NL8 207 aa19.83■□□□□ 0.77
PRKCSH-201ENST00000585325 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
PRKCSH-201ENST00000585325 QTRT2Q9H974 415 aaKnown RBP19.82■□□□□ 0.76
PRKCSH-201ENST00000585325 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms