RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
CASC3-210ENST00000584997 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
CASC3-210ENST00000584997 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
CASC3-210ENST00000584997 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
CASC3-210ENST00000584997 MSH6P52701 1360 aa16.15■□□□□ 0.18
CASC3-210ENST00000584997 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
CASC3-210ENST00000584997 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
CASC3-210ENST00000584997 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
CASC3-210ENST00000584997 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
CASC3-210ENST00000584997 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
CASC3-210ENST00000584997 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
CASC3-210ENST00000584997 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
CASC3-210ENST00000584997 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
CASC3-210ENST00000584997 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
CASC3-210ENST00000584997 TMEM131LA2VDJ0 1609 aa16.09■□□□□ 0.17
CASC3-210ENST00000584997 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
CASC3-210ENST00000584997 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
CASC3-210ENST00000584997 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
CASC3-210ENST00000584997 UNC13BO14795 1591 aa16.08■□□□□ 0.16
CASC3-210ENST00000584997 JCADQ9P266 1359 aa16.06■□□□□ 0.16
CASC3-210ENST00000584997 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
CASC3-210ENST00000584997 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
CASC3-210ENST00000584997 E9PCH4 1651 aa16.05■□□□□ 0.16
CASC3-210ENST00000584997 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
CASC3-210ENST00000584997 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
CASC3-210ENST00000584997 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
CASC3-210ENST00000584997 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
CASC3-210ENST00000584997 COL16A1Q07092 1604 aaPredicted RBP16.03■□□□□ 0.16
CASC3-210ENST00000584997 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.16
CASC3-210ENST00000584997 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
CASC3-210ENST00000584997 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.15
CASC3-210ENST00000584997 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
CASC3-210ENST00000584997 ROCK1Q13464 1354 aa16■□□□□ 0.15
CASC3-210ENST00000584997 PIK3R4Q99570 1358 aa16■□□□□ 0.15
CASC3-210ENST00000584997 TRPM2O94759 1503 aa15.99■□□□□ 0.15
CASC3-210ENST00000584997 ATF3P18847 181 aa15.99■□□□□ 0.15
CASC3-210ENST00000584997 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
CASC3-210ENST00000584997 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
CASC3-210ENST00000584997 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
CASC3-210ENST00000584997 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
CASC3-210ENST00000584997 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
CASC3-210ENST00000584997 NUP155O75694 1391 aa15.97■□□□□ 0.15
CASC3-210ENST00000584997 LRP6O75581 1613 aa15.96■□□□□ 0.15
CASC3-210ENST00000584997 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
CASC3-210ENST00000584997 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
CASC3-210ENST00000584997 ITGAEP38570 1179 aa15.94■□□□□ 0.14
CASC3-210ENST00000584997 ZNF772Q68DY9 489 aaPredicted RBP15.93■□□□□ 0.14
CASC3-210ENST00000584997 SPHKAPQ2M3C7 1700 aa15.93■□□□□ 0.14
CASC3-210ENST00000584997 PTPRUQ92729 1446 aa15.93■□□□□ 0.14
CASC3-210ENST00000584997 DCCP43146 1447 aa15.92■□□□□ 0.14
CASC3-210ENST00000584997 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
CASC3-210ENST00000584997 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
CASC3-210ENST00000584997 BRINP3Q76B58 766 aa15.91■□□□□ 0.14
CASC3-210ENST00000584997 SETBP1Q9Y6X0 1596 aa15.91■□□□□ 0.14
CASC3-210ENST00000584997 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
CASC3-210ENST00000584997 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
CASC3-210ENST00000584997 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
CASC3-210ENST00000584997 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
CASC3-210ENST00000584997 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
CASC3-210ENST00000584997 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
CASC3-210ENST00000584997 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
CASC3-210ENST00000584997 MST1RQ04912 1400 aa15.86■□□□□ 0.13
CASC3-210ENST00000584997 RXRBP28702 533 aa15.85■□□□□ 0.13
CASC3-210ENST00000584997 METP08581 1390 aa15.85■□□□□ 0.13
CASC3-210ENST00000584997 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
CASC3-210ENST00000584997 KIF1BO60333 1816 aa15.84■□□□□ 0.13
CASC3-210ENST00000584997 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
CASC3-210ENST00000584997 ADGRL3Q9HAR2 1447 aa15.84■□□□□ 0.13
CASC3-210ENST00000584997 NALCNQ8IZF0 1738 aa15.83■□□□□ 0.13
CASC3-210ENST00000584997 PPARGC1BQ86YN6 1023 aaKnown RBP15.83■□□□□ 0.12
CASC3-210ENST00000584997 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
CASC3-210ENST00000584997 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
CASC3-210ENST00000584997 NEXMIFQ5QGS0 1516 aa15.83■□□□□ 0.12
CASC3-210ENST00000584997 AFF2P51816 1311 aa15.82■□□□□ 0.12
CASC3-210ENST00000584997 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
CASC3-210ENST00000584997 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
CASC3-210ENST00000584997 C8orf37Q96NL8 207 aa15.79■□□□□ 0.12
CASC3-210ENST00000584997 PNPLA6Q8IY17 1366 aa15.78■□□□□ 0.12
CASC3-210ENST00000584997 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
CASC3-210ENST00000584997 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
CASC3-210ENST00000584997 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
CASC3-210ENST00000584997 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
CASC3-210ENST00000584997 NAIPQ13075 1403 aa15.74■□□□□ 0.11
CASC3-210ENST00000584997 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
CASC3-210ENST00000584997 RGS12O14924 1447 aa15.73■□□□□ 0.11
CASC3-210ENST00000584997 LAMC1P11047 1609 aa15.72■□□□□ 0.11
CASC3-210ENST00000584997 RRBP1Q9P2E9 1410 aaKnown RBP15.72■□□□□ 0.11
CASC3-210ENST00000584997 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
CASC3-210ENST00000584997 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
CASC3-210ENST00000584997 ROBO2Q9HCK4 1378 aa15.72■□□□□ 0.11
CASC3-210ENST00000584997 PPLO60437 1756 aa15.7■□□□□ 0.1
CASC3-210ENST00000584997 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
CASC3-210ENST00000584997 SOS2Q07890 1332 aaPredicted RBP15.69■□□□□ 0.1
CASC3-210ENST00000584997 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
CASC3-210ENST00000584997 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
CASC3-210ENST00000584997 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
CASC3-210ENST00000584997 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
CASC3-210ENST00000584997 USP21Q9UK80 565 aa15.66■□□□□ 0.1
CASC3-210ENST00000584997 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
CASC3-210ENST00000584997 CDC42BPGQ6DT37 1551 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms