RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 UGGT2Q9NYU1 1516 aa9.28□□□□□ -0.92
CDH8-213ENST00000584966 COL9A1P20849 921 aa9.28□□□□□ -0.92
CDH8-213ENST00000584966 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
CDH8-213ENST00000584966 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
CDH8-213ENST00000584966 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
CDH8-213ENST00000584966 DISP1Q96F81 1524 aa9.27□□□□□ -0.93
CDH8-213ENST00000584966 PRG4Q92954 1404 aaPredicted RBP9.27□□□□□ -0.93
CDH8-213ENST00000584966 GOLGA3Q08378 1498 aa9.27□□□□□ -0.93
CDH8-213ENST00000584966 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
CDH8-213ENST00000584966 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
CDH8-213ENST00000584966 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
CDH8-213ENST00000584966 PCDHGA10Q9Y5H3 936 aa9.25□□□□□ -0.93
CDH8-213ENST00000584966 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
CDH8-213ENST00000584966 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
CDH8-213ENST00000584966 KIAA0556O60303 1618 aa9.24□□□□□ -0.93
CDH8-213ENST00000584966 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
CDH8-213ENST00000584966 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
CDH8-213ENST00000584966 PDE4AP27815 886 aa9.23□□□□□ -0.93
CDH8-213ENST00000584966 BBXQ8WY36 941 aaPredicted RBP9.23□□□□□ -0.93
CDH8-213ENST00000584966 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
CDH8-213ENST00000584966 LOC105371045A0A1W2PR82 267 aa9.21□□□□□ -0.94
CDH8-213ENST00000584966 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.94
CDH8-213ENST00000584966 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
CDH8-213ENST00000584966 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
CDH8-213ENST00000584966 CYB5RLQ6IPT4 315 aa9.2□□□□□ -0.94
CDH8-213ENST00000584966 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
CDH8-213ENST00000584966 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
CDH8-213ENST00000584966 PRKD2Q9BZL6 878 aa9.19□□□□□ -0.94
CDH8-213ENST00000584966 TNIKQ9UKE5 1360 aa9.19□□□□□ -0.94
CDH8-213ENST00000584966 CARMIL2Q6F5E8 1435 aa9.19□□□□□ -0.94
CDH8-213ENST00000584966 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
CDH8-213ENST00000584966 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
CDH8-213ENST00000584966 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.18□□□□□ -0.94
CDH8-213ENST00000584966 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
CDH8-213ENST00000584966 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
CDH8-213ENST00000584966 ADCY10Q96PN6 1610 aa9.17□□□□□ -0.94
CDH8-213ENST00000584966 EFCAB5A4FU69 1503 aa9.17□□□□□ -0.94
CDH8-213ENST00000584966 ARHGAP35Q9NRY4 1499 aa9.17□□□□□ -0.94
CDH8-213ENST00000584966 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
CDH8-213ENST00000584966 PTPRGP23470 1445 aa9.16□□□□□ -0.94
CDH8-213ENST00000584966 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
CDH8-213ENST00000584966 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
CDH8-213ENST00000584966 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
CDH8-213ENST00000584966 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
CDH8-213ENST00000584966 PHF14O94880 888 aa9.15□□□□□ -0.94
CDH8-213ENST00000584966 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
CDH8-213ENST00000584966 P3H3Q8IVL6 736 aa9.15□□□□□ -0.94
CDH8-213ENST00000584966 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
CDH8-213ENST00000584966 ABCA8O94911 1581 aa9.15□□□□□ -0.95
CDH8-213ENST00000584966 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
CDH8-213ENST00000584966 BCANQ96GW7 911 aa9.14□□□□□ -0.95
CDH8-213ENST00000584966 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
CDH8-213ENST00000584966 FHOD3Q2V2M9 1422 aa9.14□□□□□ -0.95
CDH8-213ENST00000584966 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CDH8-213ENST00000584966 C6orf132Q5T0Z8 1188 aa9.13□□□□□ -0.95
CDH8-213ENST00000584966 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
CDH8-213ENST00000584966 LRRIQ1Q96JM4 1722 aa9.13□□□□□ -0.95
CDH8-213ENST00000584966 UHRF1BP1LA0JNW5 1464 aa9.13□□□□□ -0.95
CDH8-213ENST00000584966 PLB1Q6P1J6 1458 aa9.12□□□□□ -0.95
CDH8-213ENST00000584966 UACAQ9BZF9 1416 aa9.12□□□□□ -0.95
CDH8-213ENST00000584966 ABCC2Q92887 1545 aa9.11□□□□□ -0.95
CDH8-213ENST00000584966 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
CDH8-213ENST00000584966 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
CDH8-213ENST00000584966 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
CDH8-213ENST00000584966 ZCCHC11Q5TAX3 1644 aaKnown RBP9.1□□□□□ -0.95
CDH8-213ENST00000584966 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
CDH8-213ENST00000584966 KDM2AQ9Y2K7 1162 aa9.1□□□□□ -0.95
CDH8-213ENST00000584966 CLIP1P30622 1438 aa9.1□□□□□ -0.95
CDH8-213ENST00000584966 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
CDH8-213ENST00000584966 PPP4CP60510 307 aa9.09□□□□□ -0.95
CDH8-213ENST00000584966 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
CDH8-213ENST00000584966 KIF13AQ9H1H9 1805 aa9.09□□□□□ -0.95
CDH8-213ENST00000584966 KDM5BQ9UGL1 1544 aa9.09□□□□□ -0.95
CDH8-213ENST00000584966 MFSD10Q14728 455 aa9.08□□□□□ -0.96
CDH8-213ENST00000584966 RBM33Q96EV2 1170 aaKnown RBP9.08□□□□□ -0.96
CDH8-213ENST00000584966 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
CDH8-213ENST00000584966 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
CDH8-213ENST00000584966 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
CDH8-213ENST00000584966 NUP153P49790 1475 aaKnown RBP9.07□□□□□ -0.96
CDH8-213ENST00000584966 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
CDH8-213ENST00000584966 EPAS1Q99814 870 aa9.06□□□□□ -0.96
CDH8-213ENST00000584966 ATP10BO94823 1461 aa9.06□□□□□ -0.96
CDH8-213ENST00000584966 FMN1Q68DA7 1419 aa9.05□□□□□ -0.96
CDH8-213ENST00000584966 PCF11O94913 1555 aaKnown RBP9.05□□□□□ -0.96
CDH8-213ENST00000584966 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
CDH8-213ENST00000584966 MTRQ99707 1265 aa9.05□□□□□ -0.96
CDH8-213ENST00000584966 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
CDH8-213ENST00000584966 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
CDH8-213ENST00000584966 CASKIN1Q8WXD9 1431 aa9.03□□□□□ -0.96
CDH8-213ENST00000584966 HECW1Q76N89 1606 aa9.02□□□□□ -0.96
CDH8-213ENST00000584966 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
CDH8-213ENST00000584966 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
CDH8-213ENST00000584966 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
CDH8-213ENST00000584966 TSKSQ9UJT2 592 aa9.02□□□□□ -0.97
CDH8-213ENST00000584966 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
CDH8-213ENST00000584966 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
CDH8-213ENST00000584966 SMAPO00193 183 aa9.01□□□□□ -0.97
CDH8-213ENST00000584966 ASXL2Q76L83 1435 aa9.01□□□□□ -0.97
CDH8-213ENST00000584966 CDK13Q14004 1512 aaKnown RBP9□□□□□ -0.97
CDH8-213ENST00000584966 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms