RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 E9PCH4 1651 aa20.33■□□□□ 0.85
TRAF4-215ENST00000584944 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.85
TRAF4-215ENST00000584944 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
TRAF4-215ENST00000584944 SYNMO15061 1565 aa20.31■□□□□ 0.84
TRAF4-215ENST00000584944 FOXD1Q16676 465 aa20.31■□□□□ 0.84
TRAF4-215ENST00000584944 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
TRAF4-215ENST00000584944 IDI1Q13907 227 aa20.3■□□□□ 0.84
TRAF4-215ENST00000584944 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
TRAF4-215ENST00000584944 NOS1P29475 1434 aa20.29■□□□□ 0.84
TRAF4-215ENST00000584944 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
TRAF4-215ENST00000584944 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-215ENST00000584944 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
TRAF4-215ENST00000584944 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
TRAF4-215ENST00000584944 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
TRAF4-215ENST00000584944 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
TRAF4-215ENST00000584944 XIRP1Q702N8 1843 aaKnown RBP20.22■□□□□ 0.83
TRAF4-215ENST00000584944 TRPM2O94759 1503 aa20.22■□□□□ 0.83
TRAF4-215ENST00000584944 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-215ENST00000584944 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
TRAF4-215ENST00000584944 KCNA6P17658 529 aa20.18■□□□□ 0.82
TRAF4-215ENST00000584944 BCANQ96GW7 911 aa20.18■□□□□ 0.82
TRAF4-215ENST00000584944 SLC26A8Q96RN1 970 aa20.17■□□□□ 0.82
TRAF4-215ENST00000584944 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-215ENST00000584944 TMEM94Q12767 1356 aa20.14■□□□□ 0.81
TRAF4-215ENST00000584944 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.14■□□□□ 0.81
TRAF4-215ENST00000584944 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
TRAF4-215ENST00000584944 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
TRAF4-215ENST00000584944 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
TRAF4-215ENST00000584944 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
TRAF4-215ENST00000584944 PROSER2Q86WR7 435 aaPredicted RBP20.12■□□□□ 0.81
TRAF4-215ENST00000584944 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
TRAF4-215ENST00000584944 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
TRAF4-215ENST00000584944 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-215ENST00000584944 KIF1BO60333 1816 aa20.11■□□□□ 0.81
TRAF4-215ENST00000584944 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
TRAF4-215ENST00000584944 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
TRAF4-215ENST00000584944 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
TRAF4-215ENST00000584944 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
TRAF4-215ENST00000584944 NWD1Q149M9 1564 aa20.08■□□□□ 0.81
TRAF4-215ENST00000584944 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
TRAF4-215ENST00000584944 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.81
TRAF4-215ENST00000584944 PLEKHG1Q9ULL1 1385 aa20.08■□□□□ 0.8
TRAF4-215ENST00000584944 RPGRIP1LQ68CZ1 1315 aa20.07■□□□□ 0.8
TRAF4-215ENST00000584944 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
TRAF4-215ENST00000584944 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
TRAF4-215ENST00000584944 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-215ENST00000584944 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
TRAF4-215ENST00000584944 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
TRAF4-215ENST00000584944 ROBO1Q9Y6N7 1651 aa20.02■□□□□ 0.8
TRAF4-215ENST00000584944 MSH6P52701 1360 aa20.01■□□□□ 0.79
TRAF4-215ENST00000584944 RGS17Q9UGC6 210 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-215ENST00000584944 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
TRAF4-215ENST00000584944 SPATA31E1Q6ZUB1 1445 aa19.99■□□□□ 0.79
TRAF4-215ENST00000584944 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
TRAF4-215ENST00000584944 SLAIN2Q9P270 581 aa19.98■□□□□ 0.79
TRAF4-215ENST00000584944 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
TRAF4-215ENST00000584944 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
TRAF4-215ENST00000584944 NCOA3Q9Y6Q9 1424 aa19.96■□□□□ 0.79
TRAF4-215ENST00000584944 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
TRAF4-215ENST00000584944 TONSLQ96HA7 1378 aa19.95■□□□□ 0.79
TRAF4-215ENST00000584944 NEXMIFQ5QGS0 1516 aa19.94■□□□□ 0.78
TRAF4-215ENST00000584944 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
TRAF4-215ENST00000584944 DIP2AQ14689 1571 aa19.94■□□□□ 0.78
TRAF4-215ENST00000584944 PIK3R4Q99570 1358 aa19.94■□□□□ 0.78
TRAF4-215ENST00000584944 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
TRAF4-215ENST00000584944 PPLO60437 1756 aa19.89■□□□□ 0.77
TRAF4-215ENST00000584944 C19orf44Q9H6X5 657 aa19.89■□□□□ 0.77
TRAF4-215ENST00000584944 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
TRAF4-215ENST00000584944 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
TRAF4-215ENST00000584944 POTEAQ6S8J7 498 aa19.88■□□□□ 0.77
TRAF4-215ENST00000584944 AMOTL2Q9Y2J4 779 aa19.88■□□□□ 0.77
TRAF4-215ENST00000584944 JCADQ9P266 1359 aa19.87■□□□□ 0.77
TRAF4-215ENST00000584944 C14orf37Q86TY3 774 aa19.87■□□□□ 0.77
TRAF4-215ENST00000584944 L3MBTL2Q969R5 705 aa19.87■□□□□ 0.77
TRAF4-215ENST00000584944 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
TRAF4-215ENST00000584944 MYOM2P54296 1465 aa19.86■□□□□ 0.77
TRAF4-215ENST00000584944 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
TRAF4-215ENST00000584944 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-215ENST00000584944 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
TRAF4-215ENST00000584944 ATF3P18847 181 aa19.84■□□□□ 0.77
TRAF4-215ENST00000584944 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
TRAF4-215ENST00000584944 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
TRAF4-215ENST00000584944 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
TRAF4-215ENST00000584944 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
TRAF4-215ENST00000584944 AHDC1Q5TGY3 1603 aaPredicted RBP19.8■□□□□ 0.76
TRAF4-215ENST00000584944 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
TRAF4-215ENST00000584944 METP08581 1390 aa19.79■□□□□ 0.76
TRAF4-215ENST00000584944 DCCP43146 1447 aa19.78■□□□□ 0.76
TRAF4-215ENST00000584944 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
TRAF4-215ENST00000584944 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
TRAF4-215ENST00000584944 SPATA31A6Q5VVP1 1343 aa19.77■□□□□ 0.76
TRAF4-215ENST00000584944 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
TRAF4-215ENST00000584944 STK26Q9P289 416 aa19.77■□□□□ 0.76
TRAF4-215ENST00000584944 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
TRAF4-215ENST00000584944 LRP6O75581 1613 aa19.76■□□□□ 0.75
TRAF4-215ENST00000584944 LAMC1P11047 1609 aa19.76■□□□□ 0.75
TRAF4-215ENST00000584944 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
TRAF4-215ENST00000584944 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
TRAF4-215ENST00000584944 SHPRHQ149N8 1683 aa19.74■□□□□ 0.75
TRAF4-215ENST00000584944 MST1RQ04912 1400 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms