RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
CDK5R1-202ENST00000584716 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.45
CDK5R1-202ENST00000584716 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
CDK5R1-202ENST00000584716 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
CDK5R1-202ENST00000584716 PPLO60437 1756 aa17.83■□□□□ 0.44
CDK5R1-202ENST00000584716 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.44
CDK5R1-202ENST00000584716 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
CDK5R1-202ENST00000584716 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
CDK5R1-202ENST00000584716 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
CDK5R1-202ENST00000584716 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
CDK5R1-202ENST00000584716 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
CDK5R1-202ENST00000584716 LTKP29376 864 aa17.81■□□□□ 0.44
CDK5R1-202ENST00000584716 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
CDK5R1-202ENST00000584716 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDK5R1-202ENST00000584716 BCANQ96GW7 911 aa17.8■□□□□ 0.44
CDK5R1-202ENST00000584716 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CDK5R1-202ENST00000584716 VGFO15240 615 aaPredicted RBP17.79■□□□□ 0.44
CDK5R1-202ENST00000584716 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
CDK5R1-202ENST00000584716 SLIT1O75093 1534 aa17.78■□□□□ 0.44
CDK5R1-202ENST00000584716 ADGRF5Q8IZF2 1346 aa17.78■□□□□ 0.44
CDK5R1-202ENST00000584716 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
CDK5R1-202ENST00000584716 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
CDK5R1-202ENST00000584716 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
CDK5R1-202ENST00000584716 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
CDK5R1-202ENST00000584716 SCAF11Q99590 1463 aaKnown RBP17.74■□□□□ 0.43
CDK5R1-202ENST00000584716 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
CDK5R1-202ENST00000584716 STAC3Q96MF2 364 aa17.73■□□□□ 0.43
CDK5R1-202ENST00000584716 MYOM2P54296 1465 aa17.72■□□□□ 0.43
CDK5R1-202ENST00000584716 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
CDK5R1-202ENST00000584716 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
CDK5R1-202ENST00000584716 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
CDK5R1-202ENST00000584716 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
CDK5R1-202ENST00000584716 PLEKHG1Q9ULL1 1385 aa17.69■□□□□ 0.42
CDK5R1-202ENST00000584716 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
CDK5R1-202ENST00000584716 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
CDK5R1-202ENST00000584716 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
CDK5R1-202ENST00000584716 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
CDK5R1-202ENST00000584716 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
CDK5R1-202ENST00000584716 NRXN3Q9Y4C0 1643 aa17.66■□□□□ 0.42
CDK5R1-202ENST00000584716 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
CDK5R1-202ENST00000584716 ALKQ9UM73 1620 aa17.65■□□□□ 0.42
CDK5R1-202ENST00000584716 MED14O60244 1454 aa17.65■□□□□ 0.42
CDK5R1-202ENST00000584716 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
CDK5R1-202ENST00000584716 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
CDK5R1-202ENST00000584716 SETBP1Q9Y6X0 1596 aa17.64■□□□□ 0.41
CDK5R1-202ENST00000584716 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
CDK5R1-202ENST00000584716 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.41
CDK5R1-202ENST00000584716 TBX22Q9Y458 520 aa17.62■□□□□ 0.41
CDK5R1-202ENST00000584716 STK26Q9P289 416 aa17.61■□□□□ 0.41
CDK5R1-202ENST00000584716 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
CDK5R1-202ENST00000584716 SETD1AO15047 1707 aaKnown RBP17.61■□□□□ 0.41
CDK5R1-202ENST00000584716 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
CDK5R1-202ENST00000584716 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
CDK5R1-202ENST00000584716 METP08581 1390 aa17.6■□□□□ 0.41
CDK5R1-202ENST00000584716 LAMC1P11047 1609 aa17.6■□□□□ 0.41
CDK5R1-202ENST00000584716 CARD11Q9BXL7 1154 aa17.58■□□□□ 0.4
CDK5R1-202ENST00000584716 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
CDK5R1-202ENST00000584716 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
CDK5R1-202ENST00000584716 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
CDK5R1-202ENST00000584716 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
CDK5R1-202ENST00000584716 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
CDK5R1-202ENST00000584716 CHD2O14647 1828 aaKnown RBP17.54■□□□□ 0.4
CDK5R1-202ENST00000584716 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
CDK5R1-202ENST00000584716 PTPRUQ92729 1446 aa17.54■□□□□ 0.4
CDK5R1-202ENST00000584716 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
CDK5R1-202ENST00000584716 KCNA6P17658 529 aa17.51■□□□□ 0.39
CDK5R1-202ENST00000584716 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
CDK5R1-202ENST00000584716 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
CDK5R1-202ENST00000584716 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
CDK5R1-202ENST00000584716 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
CDK5R1-202ENST00000584716 STRCP1A6NGW2 1772 aa17.49■□□□□ 0.39
CDK5R1-202ENST00000584716 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
CDK5R1-202ENST00000584716 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDK5R1-202ENST00000584716 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
CDK5R1-202ENST00000584716 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
CDK5R1-202ENST00000584716 POGKQ9P215 609 aa17.48■□□□□ 0.39
CDK5R1-202ENST00000584716 PRAM1Q96QH2 718 aa17.47■□□□□ 0.39
CDK5R1-202ENST00000584716 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
CDK5R1-202ENST00000584716 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
CDK5R1-202ENST00000584716 USP47Q96K76 1375 aa17.46■□□□□ 0.39
CDK5R1-202ENST00000584716 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDK5R1-202ENST00000584716 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
CDK5R1-202ENST00000584716 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
CDK5R1-202ENST00000584716 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
CDK5R1-202ENST00000584716 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
CDK5R1-202ENST00000584716 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
CDK5R1-202ENST00000584716 PLEKHH1Q9ULM0 1364 aa17.44■□□□□ 0.38
CDK5R1-202ENST00000584716 ST20-MTHFSA0A0A6YYL1 179 aa17.44■□□□□ 0.38
CDK5R1-202ENST00000584716 NWD1Q149M9 1564 aa17.44■□□□□ 0.38
CDK5R1-202ENST00000584716 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
CDK5R1-202ENST00000584716 CPS1P31327 1500 aa17.42■□□□□ 0.38
CDK5R1-202ENST00000584716 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
CDK5R1-202ENST00000584716 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
CDK5R1-202ENST00000584716 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
CDK5R1-202ENST00000584716 TECPR2O15040 1411 aa17.41■□□□□ 0.38
CDK5R1-202ENST00000584716 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
CDK5R1-202ENST00000584716 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
CDK5R1-202ENST00000584716 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
CDK5R1-202ENST00000584716 PTCH1Q13635 1447 aa17.39■□□□□ 0.38
CDK5R1-202ENST00000584716 FAM135BQ49AJ0 1406 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms