RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 ADGRB3O60242 1522 aa20.17■□□□□ 0.82
CDK5RAP3-234ENST00000584525 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
CDK5RAP3-234ENST00000584525 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-234ENST00000584525 ADGRL2O95490 1459 aa20.15■□□□□ 0.82
CDK5RAP3-234ENST00000584525 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-234ENST00000584525 XIRP1Q702N8 1843 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-234ENST00000584525 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-234ENST00000584525 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
CDK5RAP3-234ENST00000584525 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-234ENST00000584525 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
CDK5RAP3-234ENST00000584525 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
CDK5RAP3-234ENST00000584525 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDK5RAP3-234ENST00000584525 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
CDK5RAP3-234ENST00000584525 NUTM2DQ5VT03 806 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-234ENST00000584525 TBX22Q9Y458 520 aa20.1■□□□□ 0.81
CDK5RAP3-234ENST00000584525 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
CDK5RAP3-234ENST00000584525 NWD1Q149M9 1564 aa20.08■□□□□ 0.81
CDK5RAP3-234ENST00000584525 JCADQ9P266 1359 aa20.08■□□□□ 0.8
CDK5RAP3-234ENST00000584525 ATF3P18847 181 aa20.03■□□□□ 0.8
CDK5RAP3-234ENST00000584525 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
CDK5RAP3-234ENST00000584525 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
CDK5RAP3-234ENST00000584525 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
CDK5RAP3-234ENST00000584525 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-234ENST00000584525 TMEM131LA2VDJ0 1609 aa20■□□□□ 0.79
CDK5RAP3-234ENST00000584525 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
CDK5RAP3-234ENST00000584525 ITGAEP38570 1179 aa19.99■□□□□ 0.79
CDK5RAP3-234ENST00000584525 NUP155O75694 1391 aa19.98■□□□□ 0.79
CDK5RAP3-234ENST00000584525 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
CDK5RAP3-234ENST00000584525 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
CDK5RAP3-234ENST00000584525 ROCK1Q13464 1354 aa19.97■□□□□ 0.79
CDK5RAP3-234ENST00000584525 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
CDK5RAP3-234ENST00000584525 PHLPP1O60346 1717 aa19.97■□□□□ 0.79
CDK5RAP3-234ENST00000584525 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-234ENST00000584525 GCC2Q8IWJ2 1684 aa19.96■□□□□ 0.79
CDK5RAP3-234ENST00000584525 ZNF772Q68DY9 489 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-234ENST00000584525 UNC13BO14795 1591 aa19.94■□□□□ 0.78
CDK5RAP3-234ENST00000584525 CHD2O14647 1828 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-234ENST00000584525 BRINP3Q76B58 766 aa19.93■□□□□ 0.78
CDK5RAP3-234ENST00000584525 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-234ENST00000584525 NUTM2BA6NNL0 878 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 NUTM2EB1AL46 878 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 NUTM2AQ8IVF1 878 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 PTPRUQ92729 1446 aa19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 DIP2AQ14689 1571 aa19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 LRP6O75581 1613 aa19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-234ENST00000584525 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
CDK5RAP3-234ENST00000584525 E9PCH4 1651 aa19.89■□□□□ 0.77
CDK5RAP3-234ENST00000584525 TRPM2O94759 1503 aa19.88■□□□□ 0.77
CDK5RAP3-234ENST00000584525 IQGAP3Q86VI3 1631 aa19.87■□□□□ 0.77
CDK5RAP3-234ENST00000584525 RXRBP28702 533 aa19.86■□□□□ 0.77
CDK5RAP3-234ENST00000584525 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-234ENST00000584525 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
CDK5RAP3-234ENST00000584525 UPF1Q92900 1129 aaKnown RBP eCLIP19.84■□□□□ 0.77
CDK5RAP3-234ENST00000584525 METP08581 1390 aa19.83■□□□□ 0.77
CDK5RAP3-234ENST00000584525 DCCP43146 1447 aa19.83■□□□□ 0.76
CDK5RAP3-234ENST00000584525 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-234ENST00000584525 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-234ENST00000584525 AFF2P51816 1311 aa19.8■□□□□ 0.76
CDK5RAP3-234ENST00000584525 MST1RQ04912 1400 aa19.8■□□□□ 0.76
CDK5RAP3-234ENST00000584525 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-234ENST00000584525 ASXL1Q8IXJ9 1541 aa19.79■□□□□ 0.76
CDK5RAP3-234ENST00000584525 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
CDK5RAP3-234ENST00000584525 C8orf37Q96NL8 207 aa19.78■□□□□ 0.76
CDK5RAP3-234ENST00000584525 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
CDK5RAP3-234ENST00000584525 SHPRHQ149N8 1683 aa19.77■□□□□ 0.76
CDK5RAP3-234ENST00000584525 QTRT2Q9H974 415 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-234ENST00000584525 ADGRL3Q9HAR2 1447 aa19.74■□□□□ 0.75
CDK5RAP3-234ENST00000584525 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
CDK5RAP3-234ENST00000584525 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-234ENST00000584525 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
CDK5RAP3-234ENST00000584525 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
CDK5RAP3-234ENST00000584525 VGFO15240 615 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-234ENST00000584525 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-234ENST00000584525 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
CDK5RAP3-234ENST00000584525 CDK12Q9NYV4 1490 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-234ENST00000584525 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
CDK5RAP3-234ENST00000584525 C1orf167Q5SNV9 1468 aa19.68■□□□□ 0.74
CDK5RAP3-234ENST00000584525 NEXMIFQ5QGS0 1516 aa19.68■□□□□ 0.74
CDK5RAP3-234ENST00000584525 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
CDK5RAP3-234ENST00000584525 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
CDK5RAP3-234ENST00000584525 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP3-234ENST00000584525 CLTCL1P53675 1640 aa19.66■□□□□ 0.74
CDK5RAP3-234ENST00000584525 NAIPQ13075 1403 aa19.65■□□□□ 0.74
CDK5RAP3-234ENST00000584525 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
CDK5RAP3-234ENST00000584525 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CDK5RAP3-234ENST00000584525 RPGRIP1LQ68CZ1 1315 aa19.64■□□□□ 0.73
CDK5RAP3-234ENST00000584525 RGS12O14924 1447 aa19.64■□□□□ 0.73
CDK5RAP3-234ENST00000584525 PTCH1Q13635 1447 aa19.64■□□□□ 0.73
CDK5RAP3-234ENST00000584525 SOS2Q07890 1332 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-234ENST00000584525 USP21Q9UK80 565 aa19.63■□□□□ 0.73
CDK5RAP3-234ENST00000584525 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
CDK5RAP3-234ENST00000584525 TRPC5Q9UL62 973 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-234ENST00000584525 NALCNQ8IZF0 1738 aa19.59■□□□□ 0.73
CDK5RAP3-234ENST00000584525 HFM1A2PYH4 1435 aa19.58■□□□□ 0.72
CDK5RAP3-234ENST00000584525 FNBP4Q8N3X1 1017 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-234ENST00000584525 FOXD1Q16676 465 aa19.56■□□□□ 0.72
CDK5RAP3-234ENST00000584525 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
CDK5RAP3-234ENST00000584525 STK26Q9P289 416 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms