RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
CDK5RAP3-233ENST00000584186 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
CDK5RAP3-233ENST00000584186 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
CDK5RAP3-233ENST00000584186 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-233ENST00000584186 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
CDK5RAP3-233ENST00000584186 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
CDK5RAP3-233ENST00000584186 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
CDK5RAP3-233ENST00000584186 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 KCNA6P17658 529 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 HSPA1LP34931 641 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 HFM1A2PYH4 1435 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 PROSER2Q86WR7 435 aaPredicted RBP20.49■□□□□ 0.87
CDK5RAP3-233ENST00000584186 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-233ENST00000584186 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ALKQ9UM73 1620 aa20.47■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-233ENST00000584186 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
CDK5RAP3-233ENST00000584186 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
CDK5RAP3-233ENST00000584186 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
CDK5RAP3-233ENST00000584186 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
CDK5RAP3-233ENST00000584186 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
CDK5RAP3-233ENST00000584186 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
CDK5RAP3-233ENST00000584186 TRPM2O94759 1503 aa20.4■□□□□ 0.86
CDK5RAP3-233ENST00000584186 CLTCL1P53675 1640 aa20.39■□□□□ 0.86
CDK5RAP3-233ENST00000584186 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
CDK5RAP3-233ENST00000584186 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
CDK5RAP3-233ENST00000584186 FOXD1Q16676 465 aa20.36■□□□□ 0.85
CDK5RAP3-233ENST00000584186 C14orf37Q86TY3 774 aa20.36■□□□□ 0.85
CDK5RAP3-233ENST00000584186 MSH6P52701 1360 aa20.35■□□□□ 0.85
CDK5RAP3-233ENST00000584186 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
CDK5RAP3-233ENST00000584186 ILDR2Q71H61 639 aa20.34■□□□□ 0.85
CDK5RAP3-233ENST00000584186 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.85
CDK5RAP3-233ENST00000584186 PIK3R4Q99570 1358 aa20.33■□□□□ 0.84
CDK5RAP3-233ENST00000584186 KIF1BO60333 1816 aa20.32■□□□□ 0.84
CDK5RAP3-233ENST00000584186 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
CDK5RAP3-233ENST00000584186 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
CDK5RAP3-233ENST00000584186 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-233ENST00000584186 METP08581 1390 aa20.27■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.83
CDK5RAP3-233ENST00000584186 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-233ENST00000584186 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
CDK5RAP3-233ENST00000584186 ATF3P18847 181 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 NCOA3Q9Y6Q9 1424 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
CDK5RAP3-233ENST00000584186 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-233ENST00000584186 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
CDK5RAP3-233ENST00000584186 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 PPLO60437 1756 aa20.16■□□□□ 0.82
CDK5RAP3-233ENST00000584186 PHLPP1O60346 1717 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SOCS7O14512 581 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 DCCP43146 1447 aa20.11■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 JCADQ9P266 1359 aa20.08■□□□□ 0.81
CDK5RAP3-233ENST00000584186 STK26Q9P289 416 aa20.08■□□□□ 0.81
CDK5RAP3-233ENST00000584186 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
CDK5RAP3-233ENST00000584186 MST1RQ04912 1400 aa20.07■□□□□ 0.8
CDK5RAP3-233ENST00000584186 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
CDK5RAP3-233ENST00000584186 COL16A1Q07092 1604 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-233ENST00000584186 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
CDK5RAP3-233ENST00000584186 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP3-233ENST00000584186 PIK3C2GO75747 1445 aa20.02■□□□□ 0.8
CDK5RAP3-233ENST00000584186 HRCP23327 699 aa20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 PRAG1Q86YV5 1406 aa20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
CDK5RAP3-233ENST00000584186 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
CDK5RAP3-233ENST00000584186 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-233ENST00000584186 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 KDM2AQ9Y2K7 1162 aa19.96■□□□□ 0.79
CDK5RAP3-233ENST00000584186 MYOM2P54296 1465 aa19.96■□□□□ 0.79
CDK5RAP3-233ENST00000584186 ABCC11Q96J66 1382 aa19.95■□□□□ 0.79
CDK5RAP3-233ENST00000584186 TECPR2O15040 1411 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms