RNA–Protein interactions for RNA: ENST00000584015.5

EPB41L3-231, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 3

Gene EPB41L3, Length 500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-231	ENST00000584015	SLC26A8	Q96RN1	970 aa		43.02	■■■■■ 4.48
EPB41L3-231	ENST00000584015	MED1	Q15648	1581 aa	Predicted RBP	43.02	■■■■■ 4.48
EPB41L3-231	ENST00000584015	NUP155	O75694	1391 aa		43.02	■■■■■ 4.48
EPB41L3-231	ENST00000584015	RIMS2	Q9UQ26	1411 aa		43	■■■■■ 4.47
EPB41L3-231	ENST00000584015	BCAN	Q96GW7	911 aa		42.98	■■■■■ 4.47
EPB41L3-231	ENST00000584015	NKTR	P30414	1462 aa	Known RBP	42.97	■■■■■ 4.47
EPB41L3-231	ENST00000584015	PLEKHG1	Q9ULL1	1385 aa		42.96	■■■■■ 4.47
EPB41L3-231	ENST00000584015	KCNA6	P17658	529 aa		42.96	■■■■■ 4.47
EPB41L3-231	ENST00000584015	PPP1R15A	O75807	674 aa	Predicted RBP	42.94	■■■■■ 4.46
EPB41L3-231	ENST00000584015	RRBP1	Q9P2E9	1410 aa	Known RBP	42.94	■■■■■ 4.46
EPB41L3-231	ENST00000584015	SPHKAP	Q2M3C7	1700 aa		42.94	■■■■■ 4.46
EPB41L3-231	ENST00000584015	TMEM94	Q12767	1356 aa		42.93	■■■■■ 4.46
EPB41L3-231	ENST00000584015	CHD2	O14647	1828 aa	Known RBP	42.92	■■■■■ 4.46
EPB41L3-231	ENST00000584015	CHGA	P10645	457 aa	Known RBP	42.92	■■■■■ 4.46
EPB41L3-231	ENST00000584015	HDGF	P51858	240 aa	Known RBP	42.92	■■■■■ 4.46
EPB41L3-231	ENST00000584015	SENP3	Q9H4L4	574 aa	Predicted RBP	42.88	■■■■■ 4.45
EPB41L3-231	ENST00000584015	SOCS7	O14512	581 aa		42.85	■■■■■ 4.45
EPB41L3-231	ENST00000584015	PROSER2	Q86WR7	435 aa	Predicted RBP	42.85	■■■■■ 4.45
EPB41L3-231	ENST00000584015	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	42.84	■■■■■ 4.45
EPB41L3-231	ENST00000584015	DIP2A	Q14689	1571 aa		42.82	■■■■■ 4.45
EPB41L3-231	ENST00000584015	ROBO1	Q9Y6N7	1651 aa		42.77	■■■■■ 4.44
EPB41L3-231	ENST00000584015	RBM33	Q96EV2	1170 aa	Known RBP	42.76	■■■■■ 4.44
EPB41L3-231	ENST00000584015	FAM135B	Q49AJ0	1406 aa		42.74	■■■■■ 4.43
EPB41L3-231	ENST00000584015	NAIP	Q13075	1403 aa		42.73	■■■■■ 4.43
EPB41L3-231	ENST00000584015	NUTM2D	Q5VT03	806 aa	Predicted RBP	42.73	■■■■■ 4.43
EPB41L3-231	ENST00000584015	MSH6	P52701	1360 aa		42.72	■■■■■ 4.43
EPB41L3-231	ENST00000584015	ADAMTS13	Q76LX8	1427 aa		42.71	■■■■■ 4.43
EPB41L3-231	ENST00000584015	TBX22	Q9Y458	520 aa		42.71	■■■■■ 4.43
EPB41L3-231	ENST00000584015	TRPM2	O94759	1503 aa		42.67	■■■■■ 4.42
EPB41L3-231	ENST00000584015	CLTCL1	P53675	1640 aa		42.67	■■■■■ 4.42
EPB41L3-231	ENST00000584015	PHF23	Q9BUL5	403 aa	Predicted RBP	42.64	■■■■■ 4.42
EPB41L3-231	ENST00000584015	KIF1B	O60333	1816 aa		42.64	■■■■■ 4.42
EPB41L3-231	ENST00000584015	PIK3R4	Q99570	1358 aa		42.63	■■■■■ 4.41
EPB41L3-231	ENST00000584015	NRXN3	Q9Y4C0	1643 aa		42.61	■■■■■ 4.41
EPB41L3-231	ENST00000584015	HFM1	A2PYH4	1435 aa		42.61	■■■■■ 4.41
EPB41L3-231	ENST00000584015	SETBP1	Q9Y6X0	1596 aa		42.58	■■■■■ 4.41
EPB41L3-231	ENST00000584015	NCOA3	Q9Y6Q9	1424 aa		42.57	■■■■■ 4.41
EPB41L3-231	ENST00000584015	ZNF326	Q5BKZ1	582 aa	Known RBP	42.55	■■■■■ 4.4
EPB41L3-231	ENST00000584015	PHLPP1	O60346	1717 aa		42.54	■■■■■ 4.4
EPB41L3-231	ENST00000584015	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	42.54	■■■■■ 4.4
EPB41L3-231	ENST00000584015	NEXMIF	Q5QGS0	1516 aa		42.51	■■■■■ 4.4
EPB41L3-231	ENST00000584015	XRN1	Q8IZH2	1706 aa	Known RBP	42.51	■■■■■ 4.4
EPB41L3-231	ENST00000584015	C14orf37	Q86TY3	774 aa		42.5	■■■■■ 4.39
EPB41L3-231	ENST00000584015	SLAIN2	Q9P270	581 aa		42.49	■■■■■ 4.39
EPB41L3-231	ENST00000584015	PTPRU	Q92729	1446 aa		42.47	■■■■■ 4.39
EPB41L3-231	ENST00000584015	TRIM52	Q96A61	297 aa		42.47	■■■■■ 4.39
EPB41L3-231	ENST00000584015	AMOTL2	Q9Y2J4	779 aa		42.43	■■■■■ 4.38
EPB41L3-231	ENST00000584015	C19orf44	Q9H6X5	657 aa		42.37	■■■■■ 4.37
EPB41L3-231	ENST00000584015	COL16A1	Q07092	1604 aa	Predicted RBP	42.36	■■■■■ 4.37
EPB41L3-231	ENST00000584015	CADPS2	Q86UW7	1296 aa		42.36	■■■■■ 4.37
EPB41L3-231	ENST00000584015	SLC4A1AP	Q9BWU0	796 aa	Known RBP	42.35	■■■■■ 4.37
EPB41L3-231	ENST00000584015	ATF3	P18847	181 aa		42.34	■■■■■ 4.37
EPB41L3-231	ENST00000584015	MET	P08581	1390 aa		42.32	■■■■■ 4.37
EPB41L3-231	ENST00000584015	DCC	P43146	1447 aa		42.3	■■■■■ 4.36
EPB41L3-231	ENST00000584015	PPL	O60437	1756 aa		42.29	■■■■■ 4.36
EPB41L3-231	ENST00000584015	SETD1A	O15047	1707 aa	Known RBP	42.29	■■■■■ 4.36
EPB41L3-231	ENST00000584015	AHDC1	Q5TGY3	1603 aa	Predicted RBP	42.28	■■■■■ 4.36
EPB41L3-231	ENST00000584015	JCAD	Q9P266	1359 aa		42.27	■■■■■ 4.36
EPB41L3-231	ENST00000584015	NALCN	Q8IZF0	1738 aa		42.24	■■■■■ 4.35
EPB41L3-231	ENST00000584015	RGS17	Q9UGC6	210 aa	Predicted RBP	42.22	■■■■■ 4.35
EPB41L3-231	ENST00000584015	VGF	O15240	615 aa	Predicted RBP	42.19	■■■■■ 4.34
EPB41L3-231	ENST00000584015	SHPRH	Q149N8	1683 aa		42.18	■■■■■ 4.34
EPB41L3-231	ENST00000584015	ADGRL3	Q9HAR2	1447 aa		42.17	■■■■■ 4.34
EPB41L3-231	ENST00000584015	RPGRIP1L	Q68CZ1	1315 aa		42.16	■■■■■ 4.34
EPB41L3-231	ENST00000584015	ASXL1	Q8IXJ9	1541 aa		42.14	■■■■■ 4.34
EPB41L3-231	ENST00000584015	MST1R	Q04912	1400 aa		42.13	■■■■■ 4.34
EPB41L3-231	ENST00000584015	FOXD1	Q16676	465 aa		42.12	■■■■■ 4.33
EPB41L3-231	ENST00000584015	NHSL1	Q5SYE7	1610 aa		42.11	■■■■■ 4.33
EPB41L3-231	ENST00000584015	BRINP3	Q76B58	766 aa		42.11	■■■■■ 4.33
EPB41L3-231	ENST00000584015	CCDC144A	A2RUR9	1427 aa		42.11	■■■■■ 4.33
EPB41L3-231	ENST00000584015	PTCH1	Q13635	1447 aa		42.11	■■■■■ 4.33
EPB41L3-231	ENST00000584015	IFT172	Q9UG01	1749 aa		42.08	■■■■■ 4.33
EPB41L3-231	ENST00000584015	SPATA31A6	Q5VVP1	1343 aa		42.04	■■■■■ 4.32
EPB41L3-231	ENST00000584015	LRP6	O75581	1613 aa		42.03	■■■■■ 4.32
EPB41L3-231	ENST00000584015	PRAG1	Q86YV5	1406 aa		42.03	■■■■■ 4.32
EPB41L3-231	ENST00000584015	MPHOSPH9	Q99550	1183 aa		42.02	■■■■■ 4.32
EPB41L3-231	ENST00000584015	POTEA	Q6S8J7	498 aa		42.01	■■■■■ 4.32
EPB41L3-231	ENST00000584015	ROBO2	Q9HCK4	1378 aa		41.99	■■■■■ 4.31
EPB41L3-231	ENST00000584015	SPATA31E1	Q6ZUB1	1445 aa		41.96	■■■■■ 4.31
EPB41L3-231	ENST00000584015	MEX3C	Q5U5Q3	659 aa	Known RBP	41.93	■■■■■ 4.3
EPB41L3-231	ENST00000584015	ACIN1	Q9UKV3	1341 aa	Known RBP	41.93	■■■■■ 4.3
EPB41L3-231	ENST00000584015	SETD5	Q9C0A6	1442 aa		41.92	■■■■■ 4.3
EPB41L3-231	ENST00000584015	RGL3	Q3MIN7	710 aa		41.9	■■■■■ 4.3
EPB41L3-231	ENST00000584015	C1orf167	Q5SNV9	1468 aa		41.9	■■■■■ 4.3
EPB41L3-231	ENST00000584015	ANKRD30B	Q9BXX2	1392 aa		41.89	■■■■■ 4.3
EPB41L3-231	ENST00000584015	ADGRF5	Q8IZF2	1346 aa		41.88	■■■■■ 4.29
EPB41L3-231	ENST00000584015	LAMC1	P11047	1609 aa		41.87	■■■■■ 4.29
EPB41L3-231	ENST00000584015	KNDC1	Q76NI1	1749 aa		41.85	■■■■■ 4.29
EPB41L3-231	ENST00000584015	CDC42BPG	Q6DT37	1551 aa		41.83	■■■■■ 4.29
EPB41L3-231	ENST00000584015	DDX17	Q92841	729 aa	Known RBP	41.8	■■■■■ 4.28
EPB41L3-231	ENST00000584015	LRRC59	Q96AG4	307 aa	Known RBP	41.8	■■■■■ 4.28
EPB41L3-231	ENST00000584015	PIK3C2G	O75747	1445 aa		41.79	■■■■■ 4.28
EPB41L3-231	ENST00000584015	NUTM2B	A6NNL0	878 aa	Predicted RBP	41.79	■■■■■ 4.28
EPB41L3-231	ENST00000584015	NUTM2E	B1AL46	878 aa	Predicted RBP	41.79	■■■■■ 4.28
EPB41L3-231	ENST00000584015	NUTM2A	Q8IVF1	878 aa	Predicted RBP	41.79	■■■■■ 4.28
EPB41L3-231	ENST00000584015	RAB3GAP2	Q9H2M9	1393 aa		41.76	■■■■■ 4.28
EPB41L3-231	ENST00000584015	ZNF772	Q68DY9	489 aa	Predicted RBP	41.76	■■■■■ 4.28
EPB41L3-231	ENST00000584015	TECPR2	O15040	1411 aa		41.76	■■■■■ 4.28
EPB41L3-231	ENST00000584015	PNPLA6	Q8IY17	1366 aa		41.74	■■■■■ 4.27
EPB41L3-231	ENST00000584015	LRPPRC	P42704	1394 aa	Known RBP	41.72	■■■■■ 4.27

Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms