RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
NDEL1-217ENST00000583683 SETD1BQ9UPS6 1966 aaKnown RBP25.88■■□□□ 1.73
NDEL1-217ENST00000583683 TRPM1Q7Z4N2 1603 aa25.87■■□□□ 1.73
NDEL1-217ENST00000583683 NRXN1Q9ULB1 1477 aa25.85■■□□□ 1.73
NDEL1-217ENST00000583683 RALGAPBQ86X10 1494 aa25.85■■□□□ 1.73
NDEL1-217ENST00000583683 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
NDEL1-217ENST00000583683 ADGRF5Q8IZF2 1346 aa25.84■■□□□ 1.73
NDEL1-217ENST00000583683 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-217ENST00000583683 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
NDEL1-217ENST00000583683 ZNF142P52746 1687 aaPredicted RBP25.81■■□□□ 1.72
NDEL1-217ENST00000583683 VGFO15240 615 aaPredicted RBP25.81■■□□□ 1.72
NDEL1-217ENST00000583683 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
NDEL1-217ENST00000583683 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
NDEL1-217ENST00000583683 RIMS2Q9UQ26 1411 aa25.79■■□□□ 1.72
NDEL1-217ENST00000583683 KIAA1210Q9ULL0 1709 aa25.79■■□□□ 1.72
NDEL1-217ENST00000583683 TMEM2Q9UHN6 1383 aa25.78■■□□□ 1.72
NDEL1-217ENST00000583683 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
NDEL1-217ENST00000583683 NBPF1Q3BBV0 1214 aa25.74■■□□□ 1.71
NDEL1-217ENST00000583683 SLIT1O75093 1534 aa25.74■■□□□ 1.71
NDEL1-217ENST00000583683 GPRASP1Q5JY77 1395 aa25.73■■□□□ 1.71
NDEL1-217ENST00000583683 ARHGAP23Q9P227 1491 aa25.73■■□□□ 1.71
NDEL1-217ENST00000583683 LAMC1P11047 1609 aa25.73■■□□□ 1.71
NDEL1-217ENST00000583683 THEMISQ8N1K5 641 aaPredicted RBP25.72■■□□□ 1.71
NDEL1-217ENST00000583683 CFAP70Q5T0N1 1121 aa25.71■■□□□ 1.71
NDEL1-217ENST00000583683 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
NDEL1-217ENST00000583683 CARD11Q9BXL7 1154 aa25.7■■□□□ 1.71
NDEL1-217ENST00000583683 HDGFP51858 240 aaKnown RBP25.7■■□□□ 1.7
NDEL1-217ENST00000583683 C14orf93Q9H972 538 aaKnown RBP25.69■■□□□ 1.7
NDEL1-217ENST00000583683 EIF4G2P78344 907 aaKnown RBP eCLIP25.67■■□□□ 1.7
NDEL1-217ENST00000583683 SETBP1Q9Y6X0 1596 aa25.67■■□□□ 1.7
NDEL1-217ENST00000583683 ZNF316A6NFI3 1004 aaPredicted RBP25.66■■□□□ 1.7
NDEL1-217ENST00000583683 LTKP29376 864 aa25.66■■□□□ 1.7
NDEL1-217ENST00000583683 USP47Q96K76 1375 aa25.65■■□□□ 1.7
NDEL1-217ENST00000583683 NRXN3Q9Y4C0 1643 aa25.65■■□□□ 1.7
NDEL1-217ENST00000583683 HSPA5P11021 654 aaKnown RBP25.64■■□□□ 1.7
NDEL1-217ENST00000583683 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
NDEL1-217ENST00000583683 HIRIP3Q9BW71 556 aaPredicted RBP25.64■■□□□ 1.7
NDEL1-217ENST00000583683 ADGRB1O14514 1584 aa25.64■■□□□ 1.69
NDEL1-217ENST00000583683 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
NDEL1-217ENST00000583683 IQGAP1P46940 1657 aa25.63■■□□□ 1.69
NDEL1-217ENST00000583683 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
NDEL1-217ENST00000583683 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
NDEL1-217ENST00000583683 SETD1AO15047 1707 aaKnown RBP25.62■■□□□ 1.69
NDEL1-217ENST00000583683 SCAF11Q99590 1463 aaKnown RBP25.61■■□□□ 1.69
NDEL1-217ENST00000583683 PLEKHG1Q9ULL1 1385 aa25.6■■□□□ 1.69
NDEL1-217ENST00000583683 ASXL1Q8IXJ9 1541 aa25.59■■□□□ 1.69
NDEL1-217ENST00000583683 TMEM132EQ6IEE7 984 aa25.57■■□□□ 1.68
NDEL1-217ENST00000583683 ADAMTS13Q76LX8 1427 aa25.54■■□□□ 1.68
NDEL1-217ENST00000583683 ANKLE2Q86XL3 938 aa25.53■■□□□ 1.68
NDEL1-217ENST00000583683 POLR1AO95602 1720 aaPredicted RBP25.53■■□□□ 1.68
NDEL1-217ENST00000583683 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
NDEL1-217ENST00000583683 BCANQ96GW7 911 aa25.52■■□□□ 1.68
NDEL1-217ENST00000583683 MED14O60244 1454 aa25.51■■□□□ 1.67
NDEL1-217ENST00000583683 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
NDEL1-217ENST00000583683 METP08581 1390 aa25.49■■□□□ 1.67
NDEL1-217ENST00000583683 EIF3AQ14152 1382 aaKnown RBP25.48■■□□□ 1.67
NDEL1-217ENST00000583683 YTHDC2Q9H6S0 1430 aaKnown RBP25.48■■□□□ 1.67
NDEL1-217ENST00000583683 ARHGEF28Q8N1W1 1705 aaKnown RBP25.47■■□□□ 1.67
NDEL1-217ENST00000583683 DIP2AQ14689 1571 aa25.47■■□□□ 1.67
NDEL1-217ENST00000583683 TRAK1Q9UPV9 953 aa25.47■■□□□ 1.67
NDEL1-217ENST00000583683 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
NDEL1-217ENST00000583683 TESK2Q96S53 571 aa25.44■■□□□ 1.66
NDEL1-217ENST00000583683 TBX22Q9Y458 520 aa25.44■■□□□ 1.66
NDEL1-217ENST00000583683 STK26Q9P289 416 aa25.43■■□□□ 1.66
NDEL1-217ENST00000583683 LRPPRCP42704 1394 aaKnown RBP25.43■■□□□ 1.66
NDEL1-217ENST00000583683 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
NDEL1-217ENST00000583683 HSPA2P54652 639 aa25.42■■□□□ 1.66
NDEL1-217ENST00000583683 NCKAP5LQ9HCH0 1330 aa25.42■■□□□ 1.66
NDEL1-217ENST00000583683 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
NDEL1-217ENST00000583683 KNDC1Q76NI1 1749 aa25.41■■□□□ 1.66
NDEL1-217ENST00000583683 QRICH2Q9H0J4 1663 aa25.4■■□□□ 1.66
NDEL1-217ENST00000583683 ABCC11Q96J66 1382 aa25.39■■□□□ 1.66
NDEL1-217ENST00000583683 DLC1Q96QB1 1528 aa25.39■■□□□ 1.65
NDEL1-217ENST00000583683 WASHC2AQ641Q2 1341 aa25.38■■□□□ 1.65
NDEL1-217ENST00000583683 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
NDEL1-217ENST00000583683 TECPR2O15040 1411 aa25.37■■□□□ 1.65
NDEL1-217ENST00000583683 PTPRUQ92729 1446 aa25.36■■□□□ 1.65
NDEL1-217ENST00000583683 CPS1P31327 1500 aa25.35■■□□□ 1.65
NDEL1-217ENST00000583683 CCDC7Q96M83 1385 aa25.35■■□□□ 1.65
NDEL1-217ENST00000583683 SBNO2Q9Y2G9 1366 aa25.35■■□□□ 1.65
NDEL1-217ENST00000583683 STRCQ7RTU9 1775 aa25.35■■□□□ 1.65
NDEL1-217ENST00000583683 KIF7Q2M1P5 1343 aa25.34■■□□□ 1.65
NDEL1-217ENST00000583683 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
NDEL1-217ENST00000583683 DISP3Q9P2K9 1392 aa25.33■■□□□ 1.65
NDEL1-217ENST00000583683 PRAM1Q96QH2 718 aa25.33■■□□□ 1.64
NDEL1-217ENST00000583683 CHD2O14647 1828 aaKnown RBP25.32■■□□□ 1.64
NDEL1-217ENST00000583683 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
NDEL1-217ENST00000583683 TMF1P82094 1093 aa25.31■■□□□ 1.64
NDEL1-217ENST00000583683 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
NDEL1-217ENST00000583683 SIRT1Q96EB6 747 aa25.3■■□□□ 1.64
NDEL1-217ENST00000583683 AMOTL2Q9Y2J4 779 aa25.3■■□□□ 1.64
NDEL1-217ENST00000583683 ROBO2Q9HCK4 1378 aa25.28■■□□□ 1.64
NDEL1-217ENST00000583683 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
NDEL1-217ENST00000583683 POGKQ9P215 609 aa25.28■■□□□ 1.64
NDEL1-217ENST00000583683 PLEKHH1Q9ULM0 1364 aa25.28■■□□□ 1.64
NDEL1-217ENST00000583683 SAFB2Q14151 953 aaKnown RBP eCLIP25.28■■□□□ 1.64
NDEL1-217ENST00000583683 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
NDEL1-217ENST00000583683 DDX10Q13206 875 aaKnown RBP25.26■■□□□ 1.63
NDEL1-217ENST00000583683 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
NDEL1-217ENST00000583683 DIEXFQ68CQ4 756 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms