RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
CCDC57-218ENST00000583593 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
CCDC57-218ENST00000583593 ZFYVE9O95405 1425 aa20.93■□□□□ 0.94
CCDC57-218ENST00000583593 ROBO1Q9Y6N7 1651 aa20.93■□□□□ 0.94
CCDC57-218ENST00000583593 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
CCDC57-218ENST00000583593 TMEM131LA2VDJ0 1609 aa20.92■□□□□ 0.94
CCDC57-218ENST00000583593 GCC2Q8IWJ2 1684 aa20.92■□□□□ 0.94
CCDC57-218ENST00000583593 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
CCDC57-218ENST00000583593 UNC13BO14795 1591 aa20.89■□□□□ 0.94
CCDC57-218ENST00000583593 PLEKHG1Q9ULL1 1385 aa20.88■□□□□ 0.93
CCDC57-218ENST00000583593 RIMS2Q9UQ26 1411 aa20.87■□□□□ 0.93
CCDC57-218ENST00000583593 E9PCH4 1651 aa20.87■□□□□ 0.93
CCDC57-218ENST00000583593 BCANQ96GW7 911 aa20.87■□□□□ 0.93
CCDC57-218ENST00000583593 MSH6P52701 1360 aa20.84■□□□□ 0.93
CCDC57-218ENST00000583593 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
CCDC57-218ENST00000583593 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
CCDC57-218ENST00000583593 IQGAP3Q86VI3 1631 aa20.82■□□□□ 0.92
CCDC57-218ENST00000583593 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
CCDC57-218ENST00000583593 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
CCDC57-218ENST00000583593 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
CCDC57-218ENST00000583593 PPP1R15AO75807 674 aaPredicted RBP20.8■□□□□ 0.92
CCDC57-218ENST00000583593 POTEAQ6S8J7 498 aa20.8■□□□□ 0.92
CCDC57-218ENST00000583593 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
CCDC57-218ENST00000583593 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
CCDC57-218ENST00000583593 PHLPP1O60346 1717 aa20.78■□□□□ 0.92
CCDC57-218ENST00000583593 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.77■□□□□ 0.92
CCDC57-218ENST00000583593 NCOA3Q9Y6Q9 1424 aa20.76■□□□□ 0.91
CCDC57-218ENST00000583593 DIP2AQ14689 1571 aa20.75■□□□□ 0.91
CCDC57-218ENST00000583593 COL16A1Q07092 1604 aaPredicted RBP20.75■□□□□ 0.91
CCDC57-218ENST00000583593 NUP155O75694 1391 aa20.73■□□□□ 0.91
CCDC57-218ENST00000583593 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
CCDC57-218ENST00000583593 PIK3R4Q99570 1358 aa20.72■□□□□ 0.91
CCDC57-218ENST00000583593 JCADQ9P266 1359 aa20.72■□□□□ 0.91
CCDC57-218ENST00000583593 PTPRUQ92729 1446 aa20.71■□□□□ 0.91
CCDC57-218ENST00000583593 ITGAEP38570 1179 aa20.69■□□□□ 0.9
CCDC57-218ENST00000583593 TRPM2O94759 1503 aa20.68■□□□□ 0.9
CCDC57-218ENST00000583593 NRXN3Q9Y4C0 1643 aa20.68■□□□□ 0.9
CCDC57-218ENST00000583593 C19orf44Q9H6X5 657 aa20.68■□□□□ 0.9
CCDC57-218ENST00000583593 C14orf37Q86TY3 774 aa20.67■□□□□ 0.9
CCDC57-218ENST00000583593 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
CCDC57-218ENST00000583593 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
CCDC57-218ENST00000583593 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
CCDC57-218ENST00000583593 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
CCDC57-218ENST00000583593 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
CCDC57-218ENST00000583593 LRP6O75581 1613 aa20.66■□□□□ 0.9
CCDC57-218ENST00000583593 ATF3P18847 181 aa20.64■□□□□ 0.89
CCDC57-218ENST00000583593 XRN1Q8IZH2 1706 aaKnown RBP20.64■□□□□ 0.89
CCDC57-218ENST00000583593 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
CCDC57-218ENST00000583593 SETD1AO15047 1707 aaKnown RBP20.63■□□□□ 0.89
CCDC57-218ENST00000583593 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
CCDC57-218ENST00000583593 SPATA31A6Q5VVP1 1343 aa20.61■□□□□ 0.89
CCDC57-218ENST00000583593 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
CCDC57-218ENST00000583593 METP08581 1390 aa20.59■□□□□ 0.89
CCDC57-218ENST00000583593 DCCP43146 1447 aa20.58■□□□□ 0.88
CCDC57-218ENST00000583593 CLTCL1P53675 1640 aa20.57■□□□□ 0.88
CCDC57-218ENST00000583593 NEXMIFQ5QGS0 1516 aa20.57■□□□□ 0.88
CCDC57-218ENST00000583593 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
CCDC57-218ENST00000583593 MST1RQ04912 1400 aa20.55■□□□□ 0.88
CCDC57-218ENST00000583593 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CCDC57-218ENST00000583593 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
CCDC57-218ENST00000583593 NAIPQ13075 1403 aa20.53■□□□□ 0.88
CCDC57-218ENST00000583593 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
CCDC57-218ENST00000583593 MEX3CQ5U5Q3 659 aaKnown RBP20.52■□□□□ 0.88
CCDC57-218ENST00000583593 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
CCDC57-218ENST00000583593 KIF1BO60333 1816 aa20.51■□□□□ 0.87
CCDC57-218ENST00000583593 NALCNQ8IZF0 1738 aa20.51■□□□□ 0.87
CCDC57-218ENST00000583593 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
CCDC57-218ENST00000583593 ADGRL3Q9HAR2 1447 aa20.5■□□□□ 0.87
CCDC57-218ENST00000583593 NUTM2BA6NNL0 878 aaPredicted RBP20.48■□□□□ 0.87
CCDC57-218ENST00000583593 NUTM2EB1AL46 878 aaPredicted RBP20.48■□□□□ 0.87
CCDC57-218ENST00000583593 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
CCDC57-218ENST00000583593 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
CCDC57-218ENST00000583593 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
CCDC57-218ENST00000583593 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCDC57-218ENST00000583593 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
CCDC57-218ENST00000583593 AFF2P51816 1311 aa20.43■□□□□ 0.86
CCDC57-218ENST00000583593 RXRBP28702 533 aa20.42■□□□□ 0.86
CCDC57-218ENST00000583593 C1orf167Q5SNV9 1468 aa20.42■□□□□ 0.86
CCDC57-218ENST00000583593 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
CCDC57-218ENST00000583593 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
CCDC57-218ENST00000583593 PTCH1Q13635 1447 aa20.41■□□□□ 0.86
CCDC57-218ENST00000583593 LAMC1P11047 1609 aa20.41■□□□□ 0.86
CCDC57-218ENST00000583593 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
CCDC57-218ENST00000583593 CDK12Q9NYV4 1490 aaPredicted RBP20.4■□□□□ 0.86
CCDC57-218ENST00000583593 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
CCDC57-218ENST00000583593 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.85
CCDC57-218ENST00000583593 PPLO60437 1756 aa20.39■□□□□ 0.85
CCDC57-218ENST00000583593 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
CCDC57-218ENST00000583593 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
CCDC57-218ENST00000583593 SLC4A1APQ9BWU0 796 aaKnown RBP20.36■□□□□ 0.85
CCDC57-218ENST00000583593 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
CCDC57-218ENST00000583593 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
CCDC57-218ENST00000583593 QTRT2Q9H974 415 aaKnown RBP20.33■□□□□ 0.85
CCDC57-218ENST00000583593 RGS12O14924 1447 aa20.32■□□□□ 0.84
CCDC57-218ENST00000583593 FOXD1Q16676 465 aa20.31■□□□□ 0.84
CCDC57-218ENST00000583593 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
CCDC57-218ENST00000583593 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
CCDC57-218ENST00000583593 ADGRF5Q8IZF2 1346 aa20.28■□□□□ 0.84
CCDC57-218ENST00000583593 NGLY1Q96IV0 654 aa20.28■□□□□ 0.84
CCDC57-218ENST00000583593 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms