RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
NLK-204ENST00000583517 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
NLK-204ENST00000583517 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
NLK-204ENST00000583517 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
NLK-204ENST00000583517 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
NLK-204ENST00000583517 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
NLK-204ENST00000583517 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
NLK-204ENST00000583517 RIMS2Q9UQ26 1411 aa18.29■□□□□ 0.52
NLK-204ENST00000583517 E9PCH4 1651 aa18.28■□□□□ 0.52
NLK-204ENST00000583517 IQGAP3Q86VI3 1631 aa18.28■□□□□ 0.52
NLK-204ENST00000583517 HDGFP51858 240 aaKnown RBP18.26■□□□□ 0.51
NLK-204ENST00000583517 RBM33Q96EV2 1170 aaKnown RBP18.26■□□□□ 0.51
NLK-204ENST00000583517 BCANQ96GW7 911 aa18.25■□□□□ 0.51
NLK-204ENST00000583517 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
NLK-204ENST00000583517 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
NLK-204ENST00000583517 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
NLK-204ENST00000583517 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
NLK-204ENST00000583517 NUP155O75694 1391 aa18.22■□□□□ 0.51
NLK-204ENST00000583517 MSH6P52701 1360 aa18.22■□□□□ 0.51
NLK-204ENST00000583517 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
NLK-204ENST00000583517 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
NLK-204ENST00000583517 CHGAP10645 457 aaKnown RBP18.2■□□□□ 0.5
NLK-204ENST00000583517 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
NLK-204ENST00000583517 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
NLK-204ENST00000583517 ITGAEP38570 1179 aa18.19■□□□□ 0.5
NLK-204ENST00000583517 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
NLK-204ENST00000583517 SLAIN2Q9P270 581 aa18.18■□□□□ 0.5
NLK-204ENST00000583517 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
NLK-204ENST00000583517 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
NLK-204ENST00000583517 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
NLK-204ENST00000583517 TRPM2O94759 1503 aa18.13■□□□□ 0.49
NLK-204ENST00000583517 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
NLK-204ENST00000583517 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
NLK-204ENST00000583517 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
NLK-204ENST00000583517 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
NLK-204ENST00000583517 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
NLK-204ENST00000583517 SETBP1Q9Y6X0 1596 aa18.1■□□□□ 0.49
NLK-204ENST00000583517 JCADQ9P266 1359 aa18.1■□□□□ 0.49
NLK-204ENST00000583517 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
NLK-204ENST00000583517 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
NLK-204ENST00000583517 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
NLK-204ENST00000583517 CADPS2Q86UW7 1296 aa18.09■□□□□ 0.49
NLK-204ENST00000583517 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
NLK-204ENST00000583517 C14orf37Q86TY3 774 aa18.08■□□□□ 0.48
NLK-204ENST00000583517 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
NLK-204ENST00000583517 NAIPQ13075 1403 aa18.06■□□□□ 0.48
NLK-204ENST00000583517 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
NLK-204ENST00000583517 AHDC1Q5TGY3 1603 aaPredicted RBP18.06■□□□□ 0.48
NLK-204ENST00000583517 ATF3P18847 181 aa18.06■□□□□ 0.48
NLK-204ENST00000583517 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
NLK-204ENST00000583517 DCCP43146 1447 aa18.05■□□□□ 0.48
NLK-204ENST00000583517 NEXMIFQ5QGS0 1516 aa18.03■□□□□ 0.48
NLK-204ENST00000583517 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
NLK-204ENST00000583517 METP08581 1390 aa18.03■□□□□ 0.48
NLK-204ENST00000583517 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
NLK-204ENST00000583517 LRP6O75581 1613 aa18.01■□□□□ 0.47
NLK-204ENST00000583517 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
NLK-204ENST00000583517 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
NLK-204ENST00000583517 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
NLK-204ENST00000583517 MST1RQ04912 1400 aa17.98■□□□□ 0.47
NLK-204ENST00000583517 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
NLK-204ENST00000583517 KIF1BO60333 1816 aa17.97■□□□□ 0.47
NLK-204ENST00000583517 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
NLK-204ENST00000583517 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
NLK-204ENST00000583517 NALCNQ8IZF0 1738 aa17.93■□□□□ 0.46
NLK-204ENST00000583517 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
NLK-204ENST00000583517 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
NLK-204ENST00000583517 PTCH1Q13635 1447 aa17.92■□□□□ 0.46
NLK-204ENST00000583517 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
NLK-204ENST00000583517 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
NLK-204ENST00000583517 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
NLK-204ENST00000583517 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
NLK-204ENST00000583517 ZNF772Q68DY9 489 aaPredicted RBP17.9■□□□□ 0.46
NLK-204ENST00000583517 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
NLK-204ENST00000583517 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
NLK-204ENST00000583517 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
NLK-204ENST00000583517 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
NLK-204ENST00000583517 C1orf167Q5SNV9 1468 aa17.87■□□□□ 0.45
NLK-204ENST00000583517 PPLO60437 1756 aa17.86■□□□□ 0.45
NLK-204ENST00000583517 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
NLK-204ENST00000583517 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
NLK-204ENST00000583517 LAMC1P11047 1609 aa17.85■□□□□ 0.45
NLK-204ENST00000583517 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
NLK-204ENST00000583517 DDX17Q92841 729 aaKnown RBP17.85■□□□□ 0.45
NLK-204ENST00000583517 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
NLK-204ENST00000583517 FOXD1Q16676 465 aa17.82■□□□□ 0.44
NLK-204ENST00000583517 AFF2P51816 1311 aa17.81■□□□□ 0.44
NLK-204ENST00000583517 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
NLK-204ENST00000583517 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
NLK-204ENST00000583517 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
NLK-204ENST00000583517 RXRBP28702 533 aa17.8■□□□□ 0.44
NLK-204ENST00000583517 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
NLK-204ENST00000583517 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
NLK-204ENST00000583517 ADGRF5Q8IZF2 1346 aa17.78■□□□□ 0.44
NLK-204ENST00000583517 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.44
NLK-204ENST00000583517 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
NLK-204ENST00000583517 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.44
NLK-204ENST00000583517 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
NLK-204ENST00000583517 TECPR2O15040 1411 aa17.76■□□□□ 0.43
NLK-204ENST00000583517 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms