RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 NEXMIFQ5QGS0 1516 aa19.68■□□□□ 0.74
ITGB4-209ENST00000583327 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
ITGB4-209ENST00000583327 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
ITGB4-209ENST00000583327 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
ITGB4-209ENST00000583327 MYOM2P54296 1465 aa19.67■□□□□ 0.74
ITGB4-209ENST00000583327 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
ITGB4-209ENST00000583327 NRXN1Q9ULB1 1477 aa19.66■□□□□ 0.74
ITGB4-209ENST00000583327 PPLO60437 1756 aa19.65■□□□□ 0.74
ITGB4-209ENST00000583327 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
ITGB4-209ENST00000583327 NBPF8Q3BBV2 869 aa19.64■□□□□ 0.73
ITGB4-209ENST00000583327 RIMS2Q9UQ26 1411 aa19.64■□□□□ 0.73
ITGB4-209ENST00000583327 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
ITGB4-209ENST00000583327 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
ITGB4-209ENST00000583327 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
ITGB4-209ENST00000583327 LTKP29376 864 aa19.62■□□□□ 0.73
ITGB4-209ENST00000583327 HDGFP51858 240 aaKnown RBP19.62■□□□□ 0.73
ITGB4-209ENST00000583327 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
ITGB4-209ENST00000583327 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
ITGB4-209ENST00000583327 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
ITGB4-209ENST00000583327 PIK3C2GO75747 1445 aa19.58■□□□□ 0.72
ITGB4-209ENST00000583327 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
ITGB4-209ENST00000583327 C14orf93Q9H972 538 aaKnown RBP19.56■□□□□ 0.72
ITGB4-209ENST00000583327 ANKLE2Q86XL3 938 aa19.55■□□□□ 0.72
ITGB4-209ENST00000583327 EID1Q9Y6B2 187 aa19.55■□□□□ 0.72
ITGB4-209ENST00000583327 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
ITGB4-209ENST00000583327 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
ITGB4-209ENST00000583327 MED14O60244 1454 aa19.53■□□□□ 0.72
ITGB4-209ENST00000583327 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
ITGB4-209ENST00000583327 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
ITGB4-209ENST00000583327 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
ITGB4-209ENST00000583327 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
ITGB4-209ENST00000583327 RALGAPBQ86X10 1494 aa19.51■□□□□ 0.71
ITGB4-209ENST00000583327 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
ITGB4-209ENST00000583327 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
ITGB4-209ENST00000583327 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
ITGB4-209ENST00000583327 ADAMTS13Q76LX8 1427 aa19.5■□□□□ 0.71
ITGB4-209ENST00000583327 HSPA2P54652 639 aa19.49■□□□□ 0.71
ITGB4-209ENST00000583327 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
ITGB4-209ENST00000583327 TBX22Q9Y458 520 aa19.48■□□□□ 0.71
ITGB4-209ENST00000583327 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
ITGB4-209ENST00000583327 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
ITGB4-209ENST00000583327 ADGRB1O14514 1584 aa19.45■□□□□ 0.7
ITGB4-209ENST00000583327 LAMC1P11047 1609 aa19.45■□□□□ 0.7
ITGB4-209ENST00000583327 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
ITGB4-209ENST00000583327 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
ITGB4-209ENST00000583327 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
ITGB4-209ENST00000583327 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
ITGB4-209ENST00000583327 STRCQ7RTU9 1775 aa19.42■□□□□ 0.7
ITGB4-209ENST00000583327 ASXL1Q8IXJ9 1541 aa19.42■□□□□ 0.7
ITGB4-209ENST00000583327 METP08581 1390 aa19.42■□□□□ 0.7
ITGB4-209ENST00000583327 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
ITGB4-209ENST00000583327 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
ITGB4-209ENST00000583327 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
ITGB4-209ENST00000583327 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
ITGB4-209ENST00000583327 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
ITGB4-209ENST00000583327 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
ITGB4-209ENST00000583327 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
ITGB4-209ENST00000583327 YTHDC2Q9H6S0 1430 aaKnown RBP19.36■□□□□ 0.69
ITGB4-209ENST00000583327 LRPPRCP42704 1394 aaKnown RBP19.36■□□□□ 0.69
ITGB4-209ENST00000583327 SIRT1Q96EB6 747 aa19.36■□□□□ 0.69
ITGB4-209ENST00000583327 BCANQ96GW7 911 aa19.36■□□□□ 0.69
ITGB4-209ENST00000583327 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
ITGB4-209ENST00000583327 TECPR2O15040 1411 aa19.34■□□□□ 0.69
ITGB4-209ENST00000583327 AEBP2Q6ZN18 517 aaPredicted RBP19.34■□□□□ 0.69
ITGB4-209ENST00000583327 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.68
ITGB4-209ENST00000583327 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
ITGB4-209ENST00000583327 USP47Q96K76 1375 aa19.32■□□□□ 0.68
ITGB4-209ENST00000583327 DLC1Q96QB1 1528 aa19.31■□□□□ 0.68
ITGB4-209ENST00000583327 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
ITGB4-209ENST00000583327 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
ITGB4-209ENST00000583327 AMOTL2Q9Y2J4 779 aa19.3■□□□□ 0.68
ITGB4-209ENST00000583327 KCNA6P17658 529 aa19.29■□□□□ 0.68
ITGB4-209ENST00000583327 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
ITGB4-209ENST00000583327 FAM135BQ49AJ0 1406 aa19.28■□□□□ 0.68
ITGB4-209ENST00000583327 STK26Q9P289 416 aa19.28■□□□□ 0.68
ITGB4-209ENST00000583327 KNDC1Q76NI1 1749 aa19.28■□□□□ 0.68
ITGB4-209ENST00000583327 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
ITGB4-209ENST00000583327 ST20-MTHFSA0A0A6YYL1 179 aa19.27■□□□□ 0.68
ITGB4-209ENST00000583327 TESK2Q96S53 571 aa19.27■□□□□ 0.68
ITGB4-209ENST00000583327 CPS1P31327 1500 aa19.26■□□□□ 0.67
ITGB4-209ENST00000583327 NWD1Q149M9 1564 aa19.26■□□□□ 0.67
ITGB4-209ENST00000583327 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
ITGB4-209ENST00000583327 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
ITGB4-209ENST00000583327 PTCH1Q13635 1447 aa19.25■□□□□ 0.67
ITGB4-209ENST00000583327 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
ITGB4-209ENST00000583327 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
ITGB4-209ENST00000583327 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
ITGB4-209ENST00000583327 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
ITGB4-209ENST00000583327 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
ITGB4-209ENST00000583327 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
ITGB4-209ENST00000583327 HIRIP3Q9BW71 556 aaPredicted RBP19.21■□□□□ 0.67
ITGB4-209ENST00000583327 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
ITGB4-209ENST00000583327 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
ITGB4-209ENST00000583327 STRCP1A6NGW2 1772 aa19.19■□□□□ 0.66
ITGB4-209ENST00000583327 POGKQ9P215 609 aa19.18■□□□□ 0.66
ITGB4-209ENST00000583327 C11orf95C9JLR9 678 aaPredicted RBP19.17■□□□□ 0.66
ITGB4-209ENST00000583327 ZNF316A6NFI3 1004 aaPredicted RBP19.16■□□□□ 0.66
ITGB4-209ENST00000583327 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
ITGB4-209ENST00000583327 NCOA3Q9Y6Q9 1424 aa19.16■□□□□ 0.66
ITGB4-209ENST00000583327 PUS7Q96PZ0 661 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms