RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 ZNF326Q5BKZ1 582 aaKnown RBP35.89■■■■□ 3.34
MIR3960-201ENST00000583311 PCGF6Q9BYE7 350 aa35.89■■■■□ 3.34
MIR3960-201ENST00000583311 NPHP4O75161 1426 aaPredicted RBP35.89■■■■□ 3.34
MIR3960-201ENST00000583311 ZFYVE9O95405 1425 aa35.87■■■■□ 3.33
MIR3960-201ENST00000583311 ANKRD30BQ9BXX2 1392 aa35.87■■■■□ 3.33
MIR3960-201ENST00000583311 PPP1R15AO75807 674 aaPredicted RBP35.85■■■■□ 3.33
MIR3960-201ENST00000583311 IQGAP1P46940 1657 aa35.84■■■■□ 3.33
MIR3960-201ENST00000583311 RPGRIP1LQ68CZ1 1315 aa35.79■■■■□ 3.32
MIR3960-201ENST00000583311 PLEKHG1Q9ULL1 1385 aa35.76■■■■□ 3.31
MIR3960-201ENST00000583311 SPATA31E1Q6ZUB1 1445 aa35.75■■■■□ 3.31
MIR3960-201ENST00000583311 BCANQ96GW7 911 aa35.74■■■■□ 3.31
MIR3960-201ENST00000583311 NEXMIFQ5QGS0 1516 aa35.73■■■■□ 3.31
MIR3960-201ENST00000583311 DHX57Q6P158 1386 aaKnown RBP35.72■■■■□ 3.31
MIR3960-201ENST00000583311 NUTM2DQ5VT03 806 aaPredicted RBP35.71■■■■□ 3.31
MIR3960-201ENST00000583311 RGL3Q3MIN7 710 aa35.7■■■■□ 3.31
MIR3960-201ENST00000583311 VGFO15240 615 aaPredicted RBP35.69■■■■□ 3.3
MIR3960-201ENST00000583311 PPLO60437 1756 aa35.64■■■■□ 3.3
MIR3960-201ENST00000583311 SLC26A8Q96RN1 970 aa35.62■■■■□ 3.29
MIR3960-201ENST00000583311 ZNF335Q9H4Z2 1342 aaPredicted RBP35.6■■■■□ 3.29
MIR3960-201ENST00000583311 DIP2AQ14689 1571 aa35.59■■■■□ 3.29
MIR3960-201ENST00000583311 SETBP1Q9Y6X0 1596 aa35.59■■■■□ 3.29
MIR3960-201ENST00000583311 TBX22Q9Y458 520 aa35.58■■■■□ 3.29
MIR3960-201ENST00000583311 SENP3Q9H4L4 574 aaPredicted RBP35.57■■■■□ 3.28
MIR3960-201ENST00000583311 IFT172Q9UG01 1749 aa35.57■■■■□ 3.28
MIR3960-201ENST00000583311 ADAMTS13Q76LX8 1427 aa35.55■■■■□ 3.28
MIR3960-201ENST00000583311 LTBP4Q8N2S1 1624 aa35.54■■■■□ 3.28
MIR3960-201ENST00000583311 CPS1P31327 1500 aa35.52■■■■□ 3.28
MIR3960-201ENST00000583311 STAC3Q96MF2 364 aa35.51■■■■□ 3.28
MIR3960-201ENST00000583311 NRXN3Q9Y4C0 1643 aa35.5■■■■□ 3.27
MIR3960-201ENST00000583311 MYOM2P54296 1465 aa35.49■■■■□ 3.27
MIR3960-201ENST00000583311 PIK3R4Q99570 1358 aa35.49■■■■□ 3.27
MIR3960-201ENST00000583311 KCNA6P17658 529 aa35.47■■■■□ 3.27
MIR3960-201ENST00000583311 ADGRF5Q8IZF2 1346 aa35.47■■■■□ 3.27
MIR3960-201ENST00000583311 CERKQ8TCT0 537 aa35.45■■■■□ 3.27
MIR3960-201ENST00000583311 SIN3AQ96ST3 1273 aa35.45■■■■□ 3.27
MIR3960-201ENST00000583311 DCAF11Q8TEB1 546 aa35.44■■■■□ 3.26
MIR3960-201ENST00000583311 NEUROD1Q13562 356 aa35.43■■■■□ 3.26
MIR3960-201ENST00000583311 NWD1Q149M9 1564 aa35.42■■■■□ 3.26
MIR3960-201ENST00000583311 PIK3C2GO75747 1445 aa35.41■■■■□ 3.26
MIR3960-201ENST00000583311 ALKQ9UM73 1620 aa35.41■■■■□ 3.26
MIR3960-201ENST00000583311 STRCP1A6NGW2 1772 aa35.4■■■■□ 3.26
MIR3960-201ENST00000583311 NRXN1Q9ULB1 1477 aa35.4■■■■□ 3.26
MIR3960-201ENST00000583311 CHD2O14647 1828 aaKnown RBP35.39■■■■□ 3.26
MIR3960-201ENST00000583311 IQSEC2Q5JU85 1478 aa35.39■■■■□ 3.26
MIR3960-201ENST00000583311 KDM2AQ9Y2K7 1162 aa35.38■■■■□ 3.25
MIR3960-201ENST00000583311 NKTRP30414 1462 aaKnown RBP35.37■■■■□ 3.25
MIR3960-201ENST00000583311 METP08581 1390 aa35.35■■■■□ 3.25
MIR3960-201ENST00000583311 CLSPNQ9HAW4 1339 aa35.34■■■■□ 3.25
MIR3960-201ENST00000583311 SETD1AO15047 1707 aaKnown RBP35.34■■■■□ 3.25
MIR3960-201ENST00000583311 LAMC1P11047 1609 aa35.32■■■■□ 3.25
MIR3960-201ENST00000583311 AMOTL2Q9Y2J4 779 aa35.32■■■■□ 3.24
MIR3960-201ENST00000583311 LRRC7Q96NW7 1537 aa35.32■■■■□ 3.24
MIR3960-201ENST00000583311 C14orf93Q9H972 538 aaKnown RBP35.3■■■■□ 3.24
MIR3960-201ENST00000583311 PROSER2Q86WR7 435 aaPredicted RBP35.29■■■■□ 3.24
MIR3960-201ENST00000583311 PTPRUQ92729 1446 aa35.29■■■■□ 3.24
MIR3960-201ENST00000583311 L3MBTL2Q969R5 705 aa35.28■■■■□ 3.24
MIR3960-201ENST00000583311 CCER1Q8TC90 406 aaPredicted RBP35.26■■■■□ 3.24
MIR3960-201ENST00000583311 XRN1Q8IZH2 1706 aaKnown RBP35.26■■■■□ 3.23
MIR3960-201ENST00000583311 TONSLQ96HA7 1378 aa35.25■■■■□ 3.23
MIR3960-201ENST00000583311 CFAP70Q5T0N1 1121 aa35.23■■■■□ 3.23
MIR3960-201ENST00000583311 TMEM94Q12767 1356 aa35.22■■■■□ 3.23
MIR3960-201ENST00000583311 NCOA3Q9Y6Q9 1424 aa35.19■■■■□ 3.22
MIR3960-201ENST00000583311 PRAG1Q86YV5 1406 aa35.18■■■■□ 3.22
MIR3960-201ENST00000583311 TMEM132EQ6IEE7 984 aa35.17■■■■□ 3.22
MIR3960-201ENST00000583311 ASXL1Q8IXJ9 1541 aa35.16■■■■□ 3.22
MIR3960-201ENST00000583311 PTCH1Q13635 1447 aa35.16■■■■□ 3.22
MIR3960-201ENST00000583311 LRPPRCP42704 1394 aaKnown RBP35.16■■■■□ 3.22
MIR3960-201ENST00000583311 YTHDC2Q9H6S0 1430 aaKnown RBP35.14■■■■□ 3.22
MIR3960-201ENST00000583311 XIRP1Q702N8 1843 aaKnown RBP35.13■■■■□ 3.21
MIR3960-201ENST00000583311 KIAA1210Q9ULL0 1709 aa35.13■■■■□ 3.21
MIR3960-201ENST00000583311 ABCC11Q96J66 1382 aa35.13■■■■□ 3.21
MIR3960-201ENST00000583311 C14orf37Q86TY3 774 aa35.11■■■■□ 3.21
MIR3960-201ENST00000583311 FBXO41Q8TF61 875 aa35.11■■■■□ 3.21
MIR3960-201ENST00000583311 RBM33Q96EV2 1170 aaKnown RBP35.11■■■■□ 3.21
MIR3960-201ENST00000583311 STK26Q9P289 416 aa35.11■■■■□ 3.21
MIR3960-201ENST00000583311 TECPR2O15040 1411 aa35.11■■■■□ 3.21
MIR3960-201ENST00000583311 MSH6P52701 1360 aa35.1■■■■□ 3.21
MIR3960-201ENST00000583311 KNDC1Q76NI1 1749 aa35.09■■■■□ 3.21
MIR3960-201ENST00000583311 TOM1O60784 492 aa35.09■■■■□ 3.21
MIR3960-201ENST00000583311 ADGRB1O14514 1584 aa35.08■■■■□ 3.21
MIR3960-201ENST00000583311 UBAP1LF5GYI3 381 aa35.08■■■■□ 3.21
MIR3960-201ENST00000583311 TIMELESSQ9UNS1 1208 aa35.08■■■■□ 3.21
MIR3960-201ENST00000583311 ROBO2Q9HCK4 1378 aa35.07■■■■□ 3.2
MIR3960-201ENST00000583311 SIRT1Q96EB6 747 aa35.04■■■■□ 3.2
MIR3960-201ENST00000583311 C19orf44Q9H6X5 657 aa35.03■■■■□ 3.2
MIR3960-201ENST00000583311 FAM135BQ49AJ0 1406 aa35.01■■■■□ 3.2
MIR3960-201ENST00000583311 DLC1Q96QB1 1528 aa35■■■■□ 3.19
MIR3960-201ENST00000583311 ADGRL3Q9HAR2 1447 aa34.98■■■■□ 3.19
MIR3960-201ENST00000583311 TRPM1Q7Z4N2 1603 aa34.97■■■■□ 3.19
MIR3960-201ENST00000583311 DCCP43146 1447 aa34.97■■■■□ 3.19
MIR3960-201ENST00000583311 ATF3P18847 181 aa34.96■■■■□ 3.19
MIR3960-201ENST00000583311 CADPS2Q86UW7 1296 aa34.96■■■■□ 3.19
MIR3960-201ENST00000583311 TRAK1Q9UPV9 953 aa34.96■■■■□ 3.19
MIR3960-201ENST00000583311 NBPF1Q3BBV0 1214 aa34.95■■■■□ 3.19
MIR3960-201ENST00000583311 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.95■■■■□ 3.18
MIR3960-201ENST00000583311 NBPF8Q3BBV2 869 aa34.93■■■■□ 3.18
MIR3960-201ENST00000583311 WAPLQ7Z5K2 1190 aa34.93■■■■□ 3.18
MIR3960-201ENST00000583311 NALCNQ8IZF0 1738 aa34.92■■■■□ 3.18
MIR3960-201ENST00000583311 ROCK2O75116 1388 aaKnown RBP34.92■■■■□ 3.18
MIR3960-201ENST00000583311 POGKQ9P215 609 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms