RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
CDK5RAP3-226ENST00000583182 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
CDK5RAP3-226ENST00000583182 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
CDK5RAP3-226ENST00000583182 ZFYVE9O95405 1425 aa23.03■■□□□ 1.28
CDK5RAP3-226ENST00000583182 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
CDK5RAP3-226ENST00000583182 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
CDK5RAP3-226ENST00000583182 BCANQ96GW7 911 aa23.02■■□□□ 1.28
CDK5RAP3-226ENST00000583182 CHD2O14647 1828 aaKnown RBP23.02■■□□□ 1.28
CDK5RAP3-226ENST00000583182 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
CDK5RAP3-226ENST00000583182 POTEAQ6S8J7 498 aa23■■□□□ 1.27
CDK5RAP3-226ENST00000583182 MSH6P52701 1360 aa23■■□□□ 1.27
CDK5RAP3-226ENST00000583182 PLEKHG1Q9ULL1 1385 aa23■■□□□ 1.27
CDK5RAP3-226ENST00000583182 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
CDK5RAP3-226ENST00000583182 PHLPP1O60346 1717 aa22.96■■□□□ 1.27
CDK5RAP3-226ENST00000583182 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
CDK5RAP3-226ENST00000583182 UNC13BO14795 1591 aa22.95■■□□□ 1.26
CDK5RAP3-226ENST00000583182 PPP1R15AO75807 674 aaPredicted RBP22.94■■□□□ 1.26
CDK5RAP3-226ENST00000583182 E9PCH4 1651 aa22.93■■□□□ 1.26
CDK5RAP3-226ENST00000583182 HDGFP51858 240 aaKnown RBP22.91■■□□□ 1.26
CDK5RAP3-226ENST00000583182 TBX22Q9Y458 520 aa22.91■■□□□ 1.26
CDK5RAP3-226ENST00000583182 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
CDK5RAP3-226ENST00000583182 ADAMTS13Q76LX8 1427 aa22.9■■□□□ 1.26
CDK5RAP3-226ENST00000583182 JCADQ9P266 1359 aa22.89■■□□□ 1.26
CDK5RAP3-226ENST00000583182 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
CDK5RAP3-226ENST00000583182 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
CDK5RAP3-226ENST00000583182 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
CDK5RAP3-226ENST00000583182 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
CDK5RAP3-226ENST00000583182 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
CDK5RAP3-226ENST00000583182 SETD1AO15047 1707 aaKnown RBP22.86■■□□□ 1.25
CDK5RAP3-226ENST00000583182 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-226ENST00000583182 DIP2AQ14689 1571 aa22.85■■□□□ 1.25
CDK5RAP3-226ENST00000583182 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CDK5RAP3-226ENST00000583182 ROCK1Q13464 1354 aa22.83■■□□□ 1.25
CDK5RAP3-226ENST00000583182 PIK3R4Q99570 1358 aa22.82■■□□□ 1.24
CDK5RAP3-226ENST00000583182 LRP6O75581 1613 aa22.82■■□□□ 1.24
CDK5RAP3-226ENST00000583182 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
CDK5RAP3-226ENST00000583182 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
CDK5RAP3-226ENST00000583182 TRPM2O94759 1503 aa22.79■■□□□ 1.24
CDK5RAP3-226ENST00000583182 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
CDK5RAP3-226ENST00000583182 PTPRUQ92729 1446 aa22.79■■□□□ 1.24
CDK5RAP3-226ENST00000583182 NUP155O75694 1391 aa22.77■■□□□ 1.24
CDK5RAP3-226ENST00000583182 ATF3P18847 181 aa22.77■■□□□ 1.24
CDK5RAP3-226ENST00000583182 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
CDK5RAP3-226ENST00000583182 SPATA31A6Q5VVP1 1343 aa22.77■■□□□ 1.24
CDK5RAP3-226ENST00000583182 AMOTL2Q9Y2J4 779 aa22.76■■□□□ 1.23
CDK5RAP3-226ENST00000583182 NRXN3Q9Y4C0 1643 aa22.75■■□□□ 1.23
CDK5RAP3-226ENST00000583182 XRN1Q8IZH2 1706 aaKnown RBP22.73■■□□□ 1.23
CDK5RAP3-226ENST00000583182 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
CDK5RAP3-226ENST00000583182 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
CDK5RAP3-226ENST00000583182 ITGAEP38570 1179 aa22.71■■□□□ 1.23
CDK5RAP3-226ENST00000583182 MEX3CQ5U5Q3 659 aaKnown RBP22.71■■□□□ 1.23
CDK5RAP3-226ENST00000583182 SETBP1Q9Y6X0 1596 aa22.71■■□□□ 1.23
CDK5RAP3-226ENST00000583182 DCCP43146 1447 aa22.69■■□□□ 1.22
CDK5RAP3-226ENST00000583182 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
CDK5RAP3-226ENST00000583182 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
CDK5RAP3-226ENST00000583182 MST1RQ04912 1400 aa22.65■■□□□ 1.22
CDK5RAP3-226ENST00000583182 METP08581 1390 aa22.65■■□□□ 1.22
CDK5RAP3-226ENST00000583182 NHSL1Q5SYE7 1610 aa22.65■■□□□ 1.22
CDK5RAP3-226ENST00000583182 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
CDK5RAP3-226ENST00000583182 NUTM2BA6NNL0 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-226ENST00000583182 NUTM2EB1AL46 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-226ENST00000583182 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
CDK5RAP3-226ENST00000583182 NUTM2AQ8IVF1 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-226ENST00000583182 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
CDK5RAP3-226ENST00000583182 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-226ENST00000583182 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
CDK5RAP3-226ENST00000583182 CLTCL1P53675 1640 aa22.61■■□□□ 1.21
CDK5RAP3-226ENST00000583182 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
CDK5RAP3-226ENST00000583182 NALCNQ8IZF0 1738 aa22.6■■□□□ 1.21
CDK5RAP3-226ENST00000583182 RXRBP28702 533 aa22.59■■□□□ 1.21
CDK5RAP3-226ENST00000583182 ADGRL3Q9HAR2 1447 aa22.58■■□□□ 1.21
CDK5RAP3-226ENST00000583182 DDX17Q92841 729 aaKnown RBP22.57■■□□□ 1.2
CDK5RAP3-226ENST00000583182 AFF2P51816 1311 aa22.57■■□□□ 1.2
CDK5RAP3-226ENST00000583182 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
CDK5RAP3-226ENST00000583182 KIF1BO60333 1816 aa22.55■■□□□ 1.2
CDK5RAP3-226ENST00000583182 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-226ENST00000583182 PNPLA6Q8IY17 1366 aa22.53■■□□□ 1.2
CDK5RAP3-226ENST00000583182 C1orf167Q5SNV9 1468 aa22.5■■□□□ 1.19
CDK5RAP3-226ENST00000583182 C8orf37Q96NL8 207 aa22.49■■□□□ 1.19
CDK5RAP3-226ENST00000583182 NAIPQ13075 1403 aa22.48■■□□□ 1.19
CDK5RAP3-226ENST00000583182 LAMC1P11047 1609 aa22.48■■□□□ 1.19
CDK5RAP3-226ENST00000583182 RGS12O14924 1447 aa22.47■■□□□ 1.19
CDK5RAP3-226ENST00000583182 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
CDK5RAP3-226ENST00000583182 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
CDK5RAP3-226ENST00000583182 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
CDK5RAP3-226ENST00000583182 RRBP1Q9P2E9 1410 aaKnown RBP22.45■■□□□ 1.18
CDK5RAP3-226ENST00000583182 RBM6P78332 1123 aaKnown RBP22.44■■□□□ 1.18
CDK5RAP3-226ENST00000583182 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
CDK5RAP3-226ENST00000583182 ORAI2Q96SN7 254 aa22.43■■□□□ 1.18
CDK5RAP3-226ENST00000583182 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
CDK5RAP3-226ENST00000583182 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
CDK5RAP3-226ENST00000583182 ADAMTS2O95450 1211 aa22.42■■□□□ 1.18
CDK5RAP3-226ENST00000583182 PPLO60437 1756 aa22.4■■□□□ 1.18
CDK5RAP3-226ENST00000583182 NGLY1Q96IV0 654 aa22.4■■□□□ 1.18
CDK5RAP3-226ENST00000583182 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
CDK5RAP3-226ENST00000583182 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
CDK5RAP3-226ENST00000583182 COL22A1Q8NFW1 1626 aaPredicted RBP22.35■■□□□ 1.17
CDK5RAP3-226ENST00000583182 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
CDK5RAP3-226ENST00000583182 USP21Q9UK80 565 aa22.33■■□□□ 1.17
CDK5RAP3-226ENST00000583182 FNBP4Q8N3X1 1017 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms