RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 E9PCH4 1651 aa22.23■■□□□ 1.15
ITGB4-208ENST00000582629 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
ITGB4-208ENST00000582629 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
ITGB4-208ENST00000582629 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
ITGB4-208ENST00000582629 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
ITGB4-208ENST00000582629 BCANQ96GW7 911 aa22.21■■□□□ 1.15
ITGB4-208ENST00000582629 PLEKHG1Q9ULL1 1385 aa22.21■■□□□ 1.15
ITGB4-208ENST00000582629 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
ITGB4-208ENST00000582629 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
ITGB4-208ENST00000582629 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
ITGB4-208ENST00000582629 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
ITGB4-208ENST00000582629 FAM135BQ49AJ0 1406 aa22.19■■□□□ 1.14
ITGB4-208ENST00000582629 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
ITGB4-208ENST00000582629 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
ITGB4-208ENST00000582629 NUP155O75694 1391 aa22.14■■□□□ 1.14
ITGB4-208ENST00000582629 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
ITGB4-208ENST00000582629 ITGAEP38570 1179 aa22.14■■□□□ 1.13
ITGB4-208ENST00000582629 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
ITGB4-208ENST00000582629 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
ITGB4-208ENST00000582629 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
ITGB4-208ENST00000582629 MSH6P52701 1360 aa22.12■■□□□ 1.13
ITGB4-208ENST00000582629 TBX22Q9Y458 520 aa22.11■■□□□ 1.13
ITGB4-208ENST00000582629 DIP2AQ14689 1571 aa22.11■■□□□ 1.13
ITGB4-208ENST00000582629 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
ITGB4-208ENST00000582629 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
ITGB4-208ENST00000582629 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
ITGB4-208ENST00000582629 NUTM2DQ5VT03 806 aaPredicted RBP22.06■■□□□ 1.12
ITGB4-208ENST00000582629 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
ITGB4-208ENST00000582629 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
ITGB4-208ENST00000582629 TRPM2O94759 1503 aa22.03■■□□□ 1.12
ITGB4-208ENST00000582629 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
ITGB4-208ENST00000582629 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
ITGB4-208ENST00000582629 PHLPP1O60346 1717 aa22.01■■□□□ 1.11
ITGB4-208ENST00000582629 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
ITGB4-208ENST00000582629 RGS17Q9UGC6 210 aaPredicted RBP21.98■■□□□ 1.11
ITGB4-208ENST00000582629 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
ITGB4-208ENST00000582629 SETBP1Q9Y6X0 1596 aa21.97■■□□□ 1.11
ITGB4-208ENST00000582629 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
ITGB4-208ENST00000582629 C19orf44Q9H6X5 657 aa21.95■■□□□ 1.1
ITGB4-208ENST00000582629 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
ITGB4-208ENST00000582629 NAIPQ13075 1403 aa21.95■■□□□ 1.1
ITGB4-208ENST00000582629 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
ITGB4-208ENST00000582629 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
ITGB4-208ENST00000582629 JCADQ9P266 1359 aa21.94■■□□□ 1.1
ITGB4-208ENST00000582629 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
ITGB4-208ENST00000582629 COL16A1Q07092 1604 aaPredicted RBP21.94■■□□□ 1.1
ITGB4-208ENST00000582629 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
ITGB4-208ENST00000582629 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
ITGB4-208ENST00000582629 ATF3P18847 181 aa21.92■■□□□ 1.1
ITGB4-208ENST00000582629 KIF1BO60333 1816 aa21.92■■□□□ 1.1
ITGB4-208ENST00000582629 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
ITGB4-208ENST00000582629 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
ITGB4-208ENST00000582629 DCCP43146 1447 aa21.89■■□□□ 1.09
ITGB4-208ENST00000582629 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
ITGB4-208ENST00000582629 POTEAQ6S8J7 498 aa21.85■■□□□ 1.09
ITGB4-208ENST00000582629 METP08581 1390 aa21.85■■□□□ 1.09
ITGB4-208ENST00000582629 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
ITGB4-208ENST00000582629 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
ITGB4-208ENST00000582629 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
ITGB4-208ENST00000582629 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
ITGB4-208ENST00000582629 LRP6O75581 1613 aa21.8■■□□□ 1.08
ITGB4-208ENST00000582629 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
ITGB4-208ENST00000582629 MST1RQ04912 1400 aa21.8■■□□□ 1.08
ITGB4-208ENST00000582629 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
ITGB4-208ENST00000582629 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
ITGB4-208ENST00000582629 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
ITGB4-208ENST00000582629 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
ITGB4-208ENST00000582629 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
ITGB4-208ENST00000582629 VGFO15240 615 aaPredicted RBP21.77■■□□□ 1.08
ITGB4-208ENST00000582629 MEX3CQ5U5Q3 659 aaKnown RBP21.75■■□□□ 1.07
ITGB4-208ENST00000582629 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
ITGB4-208ENST00000582629 PPLO60437 1756 aa21.74■■□□□ 1.07
ITGB4-208ENST00000582629 PTCH1Q13635 1447 aa21.74■■□□□ 1.07
ITGB4-208ENST00000582629 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
ITGB4-208ENST00000582629 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
ITGB4-208ENST00000582629 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
ITGB4-208ENST00000582629 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
ITGB4-208ENST00000582629 LRRC59Q96AG4 307 aaKnown RBP21.67■■□□□ 1.06
ITGB4-208ENST00000582629 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
ITGB4-208ENST00000582629 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-208ENST00000582629 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-208ENST00000582629 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-208ENST00000582629 CCDC144AA2RUR9 1427 aa21.65■■□□□ 1.06
ITGB4-208ENST00000582629 LAMC1P11047 1609 aa21.65■■□□□ 1.06
ITGB4-208ENST00000582629 FOXD1Q16676 465 aa21.64■■□□□ 1.05
ITGB4-208ENST00000582629 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
ITGB4-208ENST00000582629 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
ITGB4-208ENST00000582629 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
ITGB4-208ENST00000582629 SPATA31E1Q6ZUB1 1445 aa21.61■■□□□ 1.05
ITGB4-208ENST00000582629 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
ITGB4-208ENST00000582629 AFF2P51816 1311 aa21.58■■□□□ 1.05
ITGB4-208ENST00000582629 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
ITGB4-208ENST00000582629 RXRBP28702 533 aa21.58■■□□□ 1.05
ITGB4-208ENST00000582629 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
ITGB4-208ENST00000582629 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
ITGB4-208ENST00000582629 RGL3Q3MIN7 710 aa21.57■■□□□ 1.04
ITGB4-208ENST00000582629 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
ITGB4-208ENST00000582629 CDK12Q9NYV4 1490 aaPredicted RBP21.57■■□□□ 1.04
ITGB4-208ENST00000582629 SOS2Q07890 1332 aaPredicted RBP21.56■■□□□ 1.04
ITGB4-208ENST00000582629 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms