RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
TOP3A-213ENST00000582230 SPATA31E1Q6ZUB1 1445 aa29.23■■■□□ 2.27
TOP3A-213ENST00000582230 NEURL4Q96JN8 1562 aa29.22■■■□□ 2.27
TOP3A-213ENST00000582230 STRCQ7RTU9 1775 aa29.22■■■□□ 2.27
TOP3A-213ENST00000582230 MED14O60244 1454 aa29.21■■■□□ 2.27
TOP3A-213ENST00000582230 PPP1R15AO75807 674 aaPredicted RBP29.19■■■□□ 2.26
TOP3A-213ENST00000582230 RGL3Q3MIN7 710 aa29.19■■■□□ 2.26
TOP3A-213ENST00000582230 MYO5BQ9ULV0 1848 aa29.19■■■□□ 2.26
TOP3A-213ENST00000582230 NPHP4O75161 1426 aaPredicted RBP29.18■■■□□ 2.26
TOP3A-213ENST00000582230 POLR1AO95602 1720 aaPredicted RBP29.17■■■□□ 2.26
TOP3A-213ENST00000582230 VGFO15240 615 aaPredicted RBP29.15■■■□□ 2.26
TOP3A-213ENST00000582230 NUTM2DQ5VT03 806 aaPredicted RBP29.13■■■□□ 2.25
TOP3A-213ENST00000582230 NEXMIFQ5QGS0 1516 aa29.13■■■□□ 2.25
TOP3A-213ENST00000582230 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
TOP3A-213ENST00000582230 SIN3AQ96ST3 1273 aa29.1■■■□□ 2.25
TOP3A-213ENST00000582230 BCANQ96GW7 911 aa29.09■■■□□ 2.25
TOP3A-213ENST00000582230 CLSPNQ9HAW4 1339 aa29.09■■■□□ 2.25
TOP3A-213ENST00000582230 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
TOP3A-213ENST00000582230 NEUROD1Q13562 356 aa29.06■■■□□ 2.24
TOP3A-213ENST00000582230 STAC3Q96MF2 364 aa29.06■■■□□ 2.24
TOP3A-213ENST00000582230 CCER1Q8TC90 406 aaPredicted RBP29.04■■■□□ 2.24
TOP3A-213ENST00000582230 PPLO60437 1756 aa29.01■■■□□ 2.23
TOP3A-213ENST00000582230 ILDR1Q86SU0 546 aaPredicted RBP29.01■■■□□ 2.23
TOP3A-213ENST00000582230 DCAF11Q8TEB1 546 aa29.01■■■□□ 2.23
TOP3A-213ENST00000582230 SLC26A8Q96RN1 970 aa29.01■■■□□ 2.23
TOP3A-213ENST00000582230 TBX22Q9Y458 520 aa29.01■■■□□ 2.23
TOP3A-213ENST00000582230 ADGRF5Q8IZF2 1346 aa28.99■■■□□ 2.23
TOP3A-213ENST00000582230 SENP3Q9H4L4 574 aaPredicted RBP28.99■■■□□ 2.23
TOP3A-213ENST00000582230 MYOM2P54296 1465 aa28.98■■■□□ 2.23
TOP3A-213ENST00000582230 SETBP1Q9Y6X0 1596 aa28.97■■■□□ 2.23
TOP3A-213ENST00000582230 ADAMTS13Q76LX8 1427 aa28.97■■■□□ 2.23
TOP3A-213ENST00000582230 IFT172Q9UG01 1749 aa28.97■■■□□ 2.23
TOP3A-213ENST00000582230 KDM2AQ9Y2K7 1162 aa28.96■■■□□ 2.23
TOP3A-213ENST00000582230 DIP2AQ14689 1571 aa28.95■■■□□ 2.22
TOP3A-213ENST00000582230 L3MBTL2Q969R5 705 aa28.94■■■□□ 2.22
TOP3A-213ENST00000582230 NRXN1Q9ULB1 1477 aa28.93■■■□□ 2.22
TOP3A-213ENST00000582230 PIK3C2GO75747 1445 aa28.92■■■□□ 2.22
TOP3A-213ENST00000582230 TONSLQ96HA7 1378 aa28.91■■■□□ 2.22
TOP3A-213ENST00000582230 ZNF335Q9H4Z2 1342 aaPredicted RBP28.91■■■□□ 2.22
TOP3A-213ENST00000582230 PIK3R4Q99570 1358 aa28.9■■■□□ 2.22
TOP3A-213ENST00000582230 NRXN3Q9Y4C0 1643 aa28.9■■■□□ 2.22
TOP3A-213ENST00000582230 KCNA6P17658 529 aa28.87■■■□□ 2.21
TOP3A-213ENST00000582230 C14orf93Q9H972 538 aaKnown RBP28.86■■■□□ 2.21
TOP3A-213ENST00000582230 ALKQ9UM73 1620 aa28.86■■■□□ 2.21
TOP3A-213ENST00000582230 TIMELESSQ9UNS1 1208 aa28.85■■■□□ 2.21
TOP3A-213ENST00000582230 METP08581 1390 aa28.84■■■□□ 2.21
TOP3A-213ENST00000582230 CFAP70Q5T0N1 1121 aa28.81■■■□□ 2.2
TOP3A-213ENST00000582230 LTBP4Q8N2S1 1624 aa28.8■■■□□ 2.2
TOP3A-213ENST00000582230 CPS1P31327 1500 aa28.8■■■□□ 2.2
TOP3A-213ENST00000582230 PRAG1Q86YV5 1406 aa28.79■■■□□ 2.2
TOP3A-213ENST00000582230 AMOTL2Q9Y2J4 779 aa28.79■■■□□ 2.2
TOP3A-213ENST00000582230 LAMC1P11047 1609 aa28.77■■■□□ 2.2
TOP3A-213ENST00000582230 NWD1Q149M9 1564 aa28.76■■■□□ 2.19
TOP3A-213ENST00000582230 PTPRUQ92729 1446 aa28.76■■■□□ 2.19
TOP3A-213ENST00000582230 SETD1AO15047 1707 aaKnown RBP28.75■■■□□ 2.19
TOP3A-213ENST00000582230 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
TOP3A-213ENST00000582230 CHD2O14647 1828 aaKnown RBP28.73■■■□□ 2.19
TOP3A-213ENST00000582230 TMEM132EQ6IEE7 984 aa28.73■■■□□ 2.19
TOP3A-213ENST00000582230 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
TOP3A-213ENST00000582230 CERKQ8TCT0 537 aa28.71■■■□□ 2.19
TOP3A-213ENST00000582230 STRCP1A6NGW2 1772 aa28.7■■■□□ 2.19
TOP3A-213ENST00000582230 LRPPRCP42704 1394 aaKnown RBP28.7■■■□□ 2.18
TOP3A-213ENST00000582230 LRRC7Q96NW7 1537 aa28.69■■■□□ 2.18
TOP3A-213ENST00000582230 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
TOP3A-213ENST00000582230 ASXL1Q8IXJ9 1541 aa28.68■■■□□ 2.18
TOP3A-213ENST00000582230 YTHDC2Q9H6S0 1430 aaKnown RBP28.68■■■□□ 2.18
TOP3A-213ENST00000582230 XRN1Q8IZH2 1706 aaKnown RBP28.67■■■□□ 2.18
TOP3A-213ENST00000582230 NBPF8Q3BBV2 869 aa28.66■■■□□ 2.18
TOP3A-213ENST00000582230 STK26Q9P289 416 aa28.66■■■□□ 2.18
TOP3A-213ENST00000582230 ADGRB1O14514 1584 aa28.66■■■□□ 2.18
TOP3A-213ENST00000582230 KIAA1210Q9ULL0 1709 aa28.66■■■□□ 2.18
TOP3A-213ENST00000582230 TMEM94Q12767 1356 aa28.64■■■□□ 2.18
TOP3A-213ENST00000582230 TECPR2O15040 1411 aa28.64■■■□□ 2.18
TOP3A-213ENST00000582230 PTCH1Q13635 1447 aa28.64■■■□□ 2.18
TOP3A-213ENST00000582230 IQSEC2Q5JU85 1478 aa28.64■■■□□ 2.17
TOP3A-213ENST00000582230 NCOA3Q9Y6Q9 1424 aa28.63■■■□□ 2.17
TOP3A-213ENST00000582230 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
TOP3A-213ENST00000582230 SIRT1Q96EB6 747 aa28.63■■■□□ 2.17
TOP3A-213ENST00000582230 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
TOP3A-213ENST00000582230 ROCK2O75116 1388 aaKnown RBP28.59■■■□□ 2.17
TOP3A-213ENST00000582230 RBM33Q96EV2 1170 aaKnown RBP28.58■■■□□ 2.17
TOP3A-213ENST00000582230 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
TOP3A-213ENST00000582230 FAM135BQ49AJ0 1406 aa28.57■■■□□ 2.16
TOP3A-213ENST00000582230 TRPM1Q7Z4N2 1603 aa28.57■■■□□ 2.16
TOP3A-213ENST00000582230 DLC1Q96QB1 1528 aa28.55■■■□□ 2.16
TOP3A-213ENST00000582230 C14orf37Q86TY3 774 aa28.55■■■□□ 2.16
TOP3A-213ENST00000582230 KNDC1Q76NI1 1749 aa28.55■■■□□ 2.16
TOP3A-213ENST00000582230 RALGAPBQ86X10 1494 aa28.54■■■□□ 2.16
TOP3A-213ENST00000582230 GPRASP1Q5JY77 1395 aa28.53■■■□□ 2.16
TOP3A-213ENST00000582230 C19orf44Q9H6X5 657 aa28.53■■■□□ 2.16
TOP3A-213ENST00000582230 MSH6P52701 1360 aa28.52■■■□□ 2.16
TOP3A-213ENST00000582230 WAPLQ7Z5K2 1190 aa28.52■■■□□ 2.16
TOP3A-213ENST00000582230 PRAM1Q96QH2 718 aa28.51■■■□□ 2.15
TOP3A-213ENST00000582230 POGKQ9P215 609 aa28.51■■■□□ 2.15
TOP3A-213ENST00000582230 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
TOP3A-213ENST00000582230 ADGRL3Q9HAR2 1447 aa28.48■■■□□ 2.15
TOP3A-213ENST00000582230 PLEKHH1Q9ULM0 1364 aa28.48■■■□□ 2.15
TOP3A-213ENST00000582230 XIRP1Q702N8 1843 aaKnown RBP28.48■■■□□ 2.15
TOP3A-213ENST00000582230 TOM1O60784 492 aa28.46■■■□□ 2.15
TOP3A-213ENST00000582230 UBAP1LF5GYI3 381 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms