RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-223ENST00000582114 TMEM94Q12767 1356 aa17.87■□□□□ 0.45
CDK5RAP3-223ENST00000582114 KCNA6P17658 529 aa17.86■□□□□ 0.45
CDK5RAP3-223ENST00000582114 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-223ENST00000582114 PROSER2Q86WR7 435 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-223ENST00000582114 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-223ENST00000582114 E9PCH4 1651 aa17.84■□□□□ 0.45
CDK5RAP3-223ENST00000582114 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
CDK5RAP3-223ENST00000582114 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
CDK5RAP3-223ENST00000582114 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
CDK5RAP3-223ENST00000582114 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-223ENST00000582114 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.44
CDK5RAP3-223ENST00000582114 NUP155O75694 1391 aa17.81■□□□□ 0.44
CDK5RAP3-223ENST00000582114 IQGAP3Q86VI3 1631 aa17.81■□□□□ 0.44
CDK5RAP3-223ENST00000582114 PLEKHG1Q9ULL1 1385 aa17.8■□□□□ 0.44
CDK5RAP3-223ENST00000582114 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
CDK5RAP3-223ENST00000582114 NKTRP30414 1462 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-223ENST00000582114 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-223ENST00000582114 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
CDK5RAP3-223ENST00000582114 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.43
CDK5RAP3-223ENST00000582114 MSH6P52701 1360 aa17.76■□□□□ 0.43
CDK5RAP3-223ENST00000582114 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDK5RAP3-223ENST00000582114 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-223ENST00000582114 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
CDK5RAP3-223ENST00000582114 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
CDK5RAP3-223ENST00000582114 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
CDK5RAP3-223ENST00000582114 SLAIN2Q9P270 581 aa17.7■□□□□ 0.42
CDK5RAP3-223ENST00000582114 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-223ENST00000582114 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
CDK5RAP3-223ENST00000582114 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-223ENST00000582114 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
CDK5RAP3-223ENST00000582114 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
CDK5RAP3-223ENST00000582114 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-223ENST00000582114 TRPM2O94759 1503 aa17.65■□□□□ 0.42
CDK5RAP3-223ENST00000582114 PTPRUQ92729 1446 aa17.64■□□□□ 0.42
CDK5RAP3-223ENST00000582114 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.41
CDK5RAP3-223ENST00000582114 CLTCL1P53675 1640 aa17.63■□□□□ 0.41
CDK5RAP3-223ENST00000582114 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-223ENST00000582114 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
CDK5RAP3-223ENST00000582114 NAIPQ13075 1403 aa17.63■□□□□ 0.41
CDK5RAP3-223ENST00000582114 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
CDK5RAP3-223ENST00000582114 ATF3P18847 181 aa17.62■□□□□ 0.41
CDK5RAP3-223ENST00000582114 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
CDK5RAP3-223ENST00000582114 NCOA3Q9Y6Q9 1424 aa17.61■□□□□ 0.41
CDK5RAP3-223ENST00000582114 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
CDK5RAP3-223ENST00000582114 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
CDK5RAP3-223ENST00000582114 C19orf44Q9H6X5 657 aa17.6■□□□□ 0.41
CDK5RAP3-223ENST00000582114 SETBP1Q9Y6X0 1596 aa17.59■□□□□ 0.41
CDK5RAP3-223ENST00000582114 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
CDK5RAP3-223ENST00000582114 METP08581 1390 aa17.58■□□□□ 0.4
CDK5RAP3-223ENST00000582114 JCADQ9P266 1359 aa17.58■□□□□ 0.4
CDK5RAP3-223ENST00000582114 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
CDK5RAP3-223ENST00000582114 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-223ENST00000582114 KIF1BO60333 1816 aa17.55■□□□□ 0.4
CDK5RAP3-223ENST00000582114 HFM1A2PYH4 1435 aa17.54■□□□□ 0.4
CDK5RAP3-223ENST00000582114 BRINP3Q76B58 766 aa17.53■□□□□ 0.4
CDK5RAP3-223ENST00000582114 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-223ENST00000582114 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-223ENST00000582114 LRP6O75581 1613 aa17.52■□□□□ 0.4
CDK5RAP3-223ENST00000582114 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-223ENST00000582114 FOXD1Q16676 465 aa17.51■□□□□ 0.39
CDK5RAP3-223ENST00000582114 DCCP43146 1447 aa17.49■□□□□ 0.39
CDK5RAP3-223ENST00000582114 MST1RQ04912 1400 aa17.49■□□□□ 0.39
CDK5RAP3-223ENST00000582114 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
CDK5RAP3-223ENST00000582114 SPATA31A6Q5VVP1 1343 aa17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 NUTM2BA6NNL0 878 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 NUTM2EB1AL46 878 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 NUTM2AQ8IVF1 878 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-223ENST00000582114 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-223ENST00000582114 SHPRHQ149N8 1683 aa17.47■□□□□ 0.39
CDK5RAP3-223ENST00000582114 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
CDK5RAP3-223ENST00000582114 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-223ENST00000582114 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
CDK5RAP3-223ENST00000582114 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
CDK5RAP3-223ENST00000582114 PPLO60437 1756 aa17.43■□□□□ 0.38
CDK5RAP3-223ENST00000582114 RPGRIP1LQ68CZ1 1315 aa17.42■□□□□ 0.38
CDK5RAP3-223ENST00000582114 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
CDK5RAP3-223ENST00000582114 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
CDK5RAP3-223ENST00000582114 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
CDK5RAP3-223ENST00000582114 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
CDK5RAP3-223ENST00000582114 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-223ENST00000582114 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
CDK5RAP3-223ENST00000582114 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-223ENST00000582114 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
CDK5RAP3-223ENST00000582114 MPHOSPH9Q99550 1183 aa17.38■□□□□ 0.37
CDK5RAP3-223ENST00000582114 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
CDK5RAP3-223ENST00000582114 C8orf37Q96NL8 207 aa17.36■□□□□ 0.37
CDK5RAP3-223ENST00000582114 STK26Q9P289 416 aa17.36■□□□□ 0.37
CDK5RAP3-223ENST00000582114 AFF2P51816 1311 aa17.36■□□□□ 0.37
CDK5RAP3-223ENST00000582114 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
CDK5RAP3-223ENST00000582114 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
CDK5RAP3-223ENST00000582114 RXRBP28702 533 aa17.33■□□□□ 0.36
CDK5RAP3-223ENST00000582114 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
CDK5RAP3-223ENST00000582114 ADAMTS2O95450 1211 aa17.32■□□□□ 0.36
CDK5RAP3-223ENST00000582114 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
CDK5RAP3-223ENST00000582114 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
CDK5RAP3-223ENST00000582114 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
CDK5RAP3-223ENST00000582114 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms