RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 INTS3Q68E01 1043 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-217ENST00000581241 HOOK1Q9UJC3 728 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-217ENST00000581241 TRIM29Q14134 588 aa17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 MRE11P49959 708 aa17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 SASS6Q6UVJ0 657 aa17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
CSNK1D-217ENST00000581241 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 BICD2Q8TD16 824 aa17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 PRM3Q9NNZ6 103 aa17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 NOM1Q5C9Z4 860 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 MTERF4Q7Z6M4 381 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 ANKRD20A12PQ8NF67 263 aa17.71■□□□□ 0.43
CSNK1D-217ENST00000581241 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.42
CSNK1D-217ENST00000581241 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
CSNK1D-217ENST00000581241 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-217ENST00000581241 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
CSNK1D-217ENST00000581241 PCMTD1Q96MG8 357 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 APAF1O14727 1248 aa17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 AAMPQ13685 434 aa17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 ACBD3Q9H3P7 528 aa17.69■□□□□ 0.42
CSNK1D-217ENST00000581241 IPO7O95373 1038 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 CCDC47Q96A33 483 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 COG3Q96JB2 828 aa17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 AK7Q96M32 723 aa17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-217ENST00000581241 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
CSNK1D-217ENST00000581241 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
CSNK1D-217ENST00000581241 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-217ENST00000581241 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-217ENST00000581241 MNS1Q8NEH6 495 aa17.66■□□□□ 0.42
CSNK1D-217ENST00000581241 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-217ENST00000581241 G3V3G9 751 aa17.66■□□□□ 0.42
CSNK1D-217ENST00000581241 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
CSNK1D-217ENST00000581241 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
CSNK1D-217ENST00000581241 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
CSNK1D-217ENST00000581241 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
CSNK1D-217ENST00000581241 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
CSNK1D-217ENST00000581241 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
CSNK1D-217ENST00000581241 LETM1O95202 739 aaPredicted RBP17.64■□□□□ 0.42
CSNK1D-217ENST00000581241 CCDC7Q96M83 1385 aa17.64■□□□□ 0.42
CSNK1D-217ENST00000581241 RUFY1Q96T51 708 aa17.64■□□□□ 0.41
CSNK1D-217ENST00000581241 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-217ENST00000581241 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-217ENST00000581241 CDC45O75419 566 aa17.63■□□□□ 0.41
CSNK1D-217ENST00000581241 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-217ENST00000581241 CPLX1O14810 134 aa17.62■□□□□ 0.41
CSNK1D-217ENST00000581241 RIPK4P57078 832 aa17.62■□□□□ 0.41
CSNK1D-217ENST00000581241 CCDC73Q6ZRK6 1079 aa17.61■□□□□ 0.41
CSNK1D-217ENST00000581241 C9orf78Q9NZ63 289 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-217ENST00000581241 CDR1P51861 262 aa17.61■□□□□ 0.41
CSNK1D-217ENST00000581241 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
CSNK1D-217ENST00000581241 NAT10Q9H0A0 1025 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-217ENST00000581241 CWC15Q9P013 229 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-217ENST00000581241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-217ENST00000581241 TRAK2O60296 914 aa17.6■□□□□ 0.41
CSNK1D-217ENST00000581241 CCDC173Q0VFZ6 552 aa17.6■□□□□ 0.41
CSNK1D-217ENST00000581241 FBXW7Q969H0 707 aa17.59■□□□□ 0.41
CSNK1D-217ENST00000581241 CALRP27797 417 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-217ENST00000581241 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
CSNK1D-217ENST00000581241 CUX1P39880 1505 aa17.59■□□□□ 0.41
CSNK1D-217ENST00000581241 TSPY26PQ9H489 355 aa17.58■□□□□ 0.4
CSNK1D-217ENST00000581241 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
CSNK1D-217ENST00000581241 HSP90B2PQ58FF3 399 aa17.58■□□□□ 0.4
CSNK1D-217ENST00000581241 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
CSNK1D-217ENST00000581241 ERC2O15083 957 aa17.58■□□□□ 0.4
CSNK1D-217ENST00000581241 LNPKQ9C0E8 428 aa17.57■□□□□ 0.4
CSNK1D-217ENST00000581241 BRD4O60885 1362 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-217ENST00000581241 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
CSNK1D-217ENST00000581241 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
CSNK1D-217ENST00000581241 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
CSNK1D-217ENST00000581241 TRDNQ13061 729 aa17.56■□□□□ 0.4
CSNK1D-217ENST00000581241 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-217ENST00000581241 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.4
CSNK1D-217ENST00000581241 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
CSNK1D-217ENST00000581241 TEFQ10587 303 aa17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 CCDC66A2RUB6 948 aa17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 VGFO15240 615 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 GNAI1P63096 354 aa17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 NOL10Q9BSC4 688 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
CSNK1D-217ENST00000581241 FOSBP53539 338 aa17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 ERICH2A1L162 156 aa17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 APPP05067 770 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms