RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SENP3Q9H4L4 574 aaPredicted RBP32.31■■■□□ 2.76
CSNK1D-216ENST00000581108 ZFYVE9O95405 1425 aa32.3■■■□□ 2.76
CSNK1D-216ENST00000581108 XIRP1Q702N8 1843 aaKnown RBP32.3■■■□□ 2.76
CSNK1D-216ENST00000581108 HSPA1LP34931 641 aa32.29■■■□□ 2.76
CSNK1D-216ENST00000581108 RIMS2Q9UQ26 1411 aa32.28■■■□□ 2.76
CSNK1D-216ENST00000581108 NAIPQ13075 1403 aa32.26■■■□□ 2.76
CSNK1D-216ENST00000581108 KCNA6P17658 529 aa32.26■■■□□ 2.75
CSNK1D-216ENST00000581108 HDGFP51858 240 aaKnown RBP32.26■■■□□ 2.75
CSNK1D-216ENST00000581108 PPP1R15AO75807 674 aaPredicted RBP32.25■■■□□ 2.75
CSNK1D-216ENST00000581108 PLEKHG1Q9ULL1 1385 aa32.22■■■□□ 2.75
CSNK1D-216ENST00000581108 NUTM2DQ5VT03 806 aaPredicted RBP32.21■■■□□ 2.75
CSNK1D-216ENST00000581108 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.2■■■□□ 2.75
CSNK1D-216ENST00000581108 SPHKAPQ2M3C7 1700 aa32.19■■■□□ 2.74
CSNK1D-216ENST00000581108 TMEM94Q12767 1356 aa32.18■■■□□ 2.74
CSNK1D-216ENST00000581108 PROSER2Q86WR7 435 aaPredicted RBP32.17■■■□□ 2.74
CSNK1D-216ENST00000581108 RBM33Q96EV2 1170 aaKnown RBP32.17■■■□□ 2.74
CSNK1D-216ENST00000581108 HFM1A2PYH4 1435 aa32.14■■■□□ 2.74
CSNK1D-216ENST00000581108 NWD1Q149M9 1564 aa32.14■■■□□ 2.74
CSNK1D-216ENST00000581108 CHD2O14647 1828 aaKnown RBP32.14■■■□□ 2.74
CSNK1D-216ENST00000581108 ILDR2Q71H61 639 aa32.13■■■□□ 2.73
CSNK1D-216ENST00000581108 TBX22Q9Y458 520 aa32.12■■■□□ 2.73
CSNK1D-216ENST00000581108 TRIM52Q96A61 297 aa32.11■■■□□ 2.73
CSNK1D-216ENST00000581108 NKTRP30414 1462 aaKnown RBP32.1■■■□□ 2.73
CSNK1D-216ENST00000581108 ADAMTS13Q76LX8 1427 aa32.08■■■□□ 2.73
CSNK1D-216ENST00000581108 CLTCL1P53675 1640 aa32.04■■■□□ 2.72
CSNK1D-216ENST00000581108 ZNF326Q5BKZ1 582 aaKnown RBP32.04■■■□□ 2.72
CSNK1D-216ENST00000581108 TRPM2O94759 1503 aa32.02■■■□□ 2.72
CSNK1D-216ENST00000581108 DIP2AQ14689 1571 aa32.01■■■□□ 2.71
CSNK1D-216ENST00000581108 SLC4A1APQ9BWU0 796 aaKnown RBP32■■■□□ 2.71
CSNK1D-216ENST00000581108 FAM135BQ49AJ0 1406 aa31.98■■■□□ 2.71
CSNK1D-216ENST00000581108 KIF1BO60333 1816 aa31.98■■■□□ 2.71
CSNK1D-216ENST00000581108 MSH6P52701 1360 aa31.97■■■□□ 2.71
CSNK1D-216ENST00000581108 MED1Q15648 1581 aaPredicted RBP31.97■■■□□ 2.71
CSNK1D-216ENST00000581108 PIK3R4Q99570 1358 aa31.96■■■□□ 2.71
CSNK1D-216ENST00000581108 NRXN3Q9Y4C0 1643 aa31.94■■■□□ 2.7
CSNK1D-216ENST00000581108 AMOTL2Q9Y2J4 779 aa31.92■■■□□ 2.7
CSNK1D-216ENST00000581108 ROBO1Q9Y6N7 1651 aa31.92■■■□□ 2.7
CSNK1D-216ENST00000581108 PTPRUQ92729 1446 aa31.92■■■□□ 2.7
CSNK1D-216ENST00000581108 NEXMIFQ5QGS0 1516 aa31.91■■■□□ 2.7
CSNK1D-216ENST00000581108 SETBP1Q9Y6X0 1596 aa31.9■■■□□ 2.7
CSNK1D-216ENST00000581108 SLAIN2Q9P270 581 aa31.9■■■□□ 2.7
CSNK1D-216ENST00000581108 FOXD1Q16676 465 aa31.88■■■□□ 2.69
CSNK1D-216ENST00000581108 C14orf37Q86TY3 774 aa31.88■■■□□ 2.69
CSNK1D-216ENST00000581108 NCOA3Q9Y6Q9 1424 aa31.88■■■□□ 2.69
CSNK1D-216ENST00000581108 METP08581 1390 aa31.83■■■□□ 2.69
CSNK1D-216ENST00000581108 SOCS7O14512 581 aa31.83■■■□□ 2.69
CSNK1D-216ENST00000581108 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.83■■■□□ 2.69
CSNK1D-216ENST00000581108 C19orf44Q9H6X5 657 aa31.82■■■□□ 2.68
CSNK1D-216ENST00000581108 XRN1Q8IZH2 1706 aaKnown RBP31.8■■■□□ 2.68
CSNK1D-216ENST00000581108 MPHOSPH9Q99550 1183 aa31.8■■■□□ 2.68
CSNK1D-216ENST00000581108 VGFO15240 615 aaPredicted RBP31.78■■■□□ 2.68
CSNK1D-216ENST00000581108 PHF23Q9BUL5 403 aaPredicted RBP31.77■■■□□ 2.68
CSNK1D-216ENST00000581108 ATF3P18847 181 aa31.76■■■□□ 2.67
CSNK1D-216ENST00000581108 CADPS2Q86UW7 1296 aa31.76■■■□□ 2.67
CSNK1D-216ENST00000581108 RPGRIP1LQ68CZ1 1315 aa31.75■■■□□ 2.67
CSNK1D-216ENST00000581108 PHLPP1O60346 1717 aa31.73■■■□□ 2.67
CSNK1D-216ENST00000581108 PPLO60437 1756 aa31.73■■■□□ 2.67
CSNK1D-216ENST00000581108 SETD5Q9C0A6 1442 aa31.72■■■□□ 2.67
CSNK1D-216ENST00000581108 CCDC144AA2RUR9 1427 aa31.7■■■□□ 2.67
CSNK1D-216ENST00000581108 SETD1AO15047 1707 aaKnown RBP31.68■■■□□ 2.66
CSNK1D-216ENST00000581108 RGL3Q3MIN7 710 aa31.66■■■□□ 2.66
CSNK1D-216ENST00000581108 ACIN1Q9UKV3 1341 aaKnown RBP31.64■■■□□ 2.66
CSNK1D-216ENST00000581108 DCCP43146 1447 aa31.64■■■□□ 2.66
CSNK1D-216ENST00000581108 SPATA31E1Q6ZUB1 1445 aa31.62■■■□□ 2.65
CSNK1D-216ENST00000581108 COL16A1Q07092 1604 aaPredicted RBP31.61■■■□□ 2.65
CSNK1D-216ENST00000581108 RGS17Q9UGC6 210 aaPredicted RBP31.61■■■□□ 2.65
CSNK1D-216ENST00000581108 RAB3GAP2Q9H2M9 1393 aa31.6■■■□□ 2.65
CSNK1D-216ENST00000581108 BRINP3Q76B58 766 aa31.6■■■□□ 2.65
CSNK1D-216ENST00000581108 ADGRF5Q8IZF2 1346 aa31.59■■■□□ 2.65
CSNK1D-216ENST00000581108 NALCNQ8IZF0 1738 aa31.59■■■□□ 2.65
CSNK1D-216ENST00000581108 ADGRL3Q9HAR2 1447 aa31.58■■■□□ 2.65
CSNK1D-216ENST00000581108 JCADQ9P266 1359 aa31.58■■■□□ 2.65
CSNK1D-216ENST00000581108 MST1RQ04912 1400 aa31.58■■■□□ 2.65
CSNK1D-216ENST00000581108 AHDC1Q5TGY3 1603 aaPredicted RBP31.57■■■□□ 2.64
CSNK1D-216ENST00000581108 ROBO2Q9HCK4 1378 aa31.56■■■□□ 2.64
CSNK1D-216ENST00000581108 IFT172Q9UG01 1749 aa31.56■■■□□ 2.64
CSNK1D-216ENST00000581108 PTCH1Q13635 1447 aa31.54■■■□□ 2.64
CSNK1D-216ENST00000581108 ANKRD30BQ9BXX2 1392 aa31.53■■■□□ 2.64
CSNK1D-216ENST00000581108 ASXL1Q8IXJ9 1541 aa31.51■■■□□ 2.63
CSNK1D-216ENST00000581108 PRAG1Q86YV5 1406 aa31.49■■■□□ 2.63
CSNK1D-216ENST00000581108 STK26Q9P289 416 aa31.44■■■□□ 2.62
CSNK1D-216ENST00000581108 NHSL1Q5SYE7 1610 aa31.44■■■□□ 2.62
CSNK1D-216ENST00000581108 SHPRHQ149N8 1683 aa31.44■■■□□ 2.62
CSNK1D-216ENST00000581108 SPATA31A6Q5VVP1 1343 aa31.44■■■□□ 2.62
CSNK1D-216ENST00000581108 TMEM132EQ6IEE7 984 aa31.43■■■□□ 2.62
CSNK1D-216ENST00000581108 POTEAQ6S8J7 498 aa31.43■■■□□ 2.62
CSNK1D-216ENST00000581108 DDX17Q92841 729 aaKnown RBP31.43■■■□□ 2.62
CSNK1D-216ENST00000581108 PIK3C2GO75747 1445 aa31.42■■■□□ 2.62
CSNK1D-216ENST00000581108 C1orf167Q5SNV9 1468 aa31.42■■■□□ 2.62
CSNK1D-216ENST00000581108 LRP6O75581 1613 aa31.4■■■□□ 2.62
CSNK1D-216ENST00000581108 WAPLQ7Z5K2 1190 aa31.38■■■□□ 2.61
CSNK1D-216ENST00000581108 ORAI2Q96SN7 254 aa31.38■■■□□ 2.61
CSNK1D-216ENST00000581108 LRPPRCP42704 1394 aaKnown RBP31.38■■■□□ 2.61
CSNK1D-216ENST00000581108 HRCP23327 699 aa31.37■■■□□ 2.61
CSNK1D-216ENST00000581108 LRRC59Q96AG4 307 aaKnown RBP31.36■■■□□ 2.61
CSNK1D-216ENST00000581108 TECPR2O15040 1411 aa31.35■■■□□ 2.61
CSNK1D-216ENST00000581108 ABCC11Q96J66 1382 aa31.35■■■□□ 2.61
CSNK1D-216ENST00000581108 MEX3CQ5U5Q3 659 aaKnown RBP31.34■■■□□ 2.61
CSNK1D-216ENST00000581108 C14orf93Q9H972 538 aaKnown RBP31.34■■■□□ 2.61
CSNK1D-216ENST00000581108 NUTM2BA6NNL0 878 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms