RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 PPP1R15AO75807 674 aaPredicted RBP26.7■■□□□ 1.86
CSNK1D-214ENST00000580565 CHGAP10645 457 aaKnown RBP26.7■■□□□ 1.86
CSNK1D-214ENST00000580565 PROSER2Q86WR7 435 aaPredicted RBP26.7■■□□□ 1.86
CSNK1D-214ENST00000580565 SENP3Q9H4L4 574 aaPredicted RBP26.7■■□□□ 1.86
CSNK1D-214ENST00000580565 RIMS2Q9UQ26 1411 aa26.7■■□□□ 1.86
CSNK1D-214ENST00000580565 GCC2Q8IWJ2 1684 aa26.68■■□□□ 1.86
CSNK1D-214ENST00000580565 PLEKHG1Q9ULL1 1385 aa26.68■■□□□ 1.86
CSNK1D-214ENST00000580565 IQGAP3Q86VI3 1631 aa26.66■■□□□ 1.86
CSNK1D-214ENST00000580565 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.66■■□□□ 1.86
CSNK1D-214ENST00000580565 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
CSNK1D-214ENST00000580565 RBM33Q96EV2 1170 aaKnown RBP26.65■■□□□ 1.86
CSNK1D-214ENST00000580565 E9PCH4 1651 aa26.64■■□□□ 1.86
CSNK1D-214ENST00000580565 MED1Q15648 1581 aaPredicted RBP26.63■■□□□ 1.85
CSNK1D-214ENST00000580565 TBX22Q9Y458 520 aa26.62■■□□□ 1.85
CSNK1D-214ENST00000580565 XIRP1Q702N8 1843 aaKnown RBP26.61■■□□□ 1.85
CSNK1D-214ENST00000580565 NKTRP30414 1462 aaKnown RBP26.61■■□□□ 1.85
CSNK1D-214ENST00000580565 NUTM2DQ5VT03 806 aaPredicted RBP26.6■■□□□ 1.85
CSNK1D-214ENST00000580565 FAM135BQ49AJ0 1406 aa26.59■■□□□ 1.85
CSNK1D-214ENST00000580565 RRBP1Q9P2E9 1410 aaKnown RBP26.59■■□□□ 1.85
CSNK1D-214ENST00000580565 NWD1Q149M9 1564 aa26.58■■□□□ 1.85
CSNK1D-214ENST00000580565 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
CSNK1D-214ENST00000580565 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
CSNK1D-214ENST00000580565 MSH6P52701 1360 aa26.54■■□□□ 1.84
CSNK1D-214ENST00000580565 ADAMTS13Q76LX8 1427 aa26.53■■□□□ 1.84
CSNK1D-214ENST00000580565 NAIPQ13075 1403 aa26.5■■□□□ 1.83
CSNK1D-214ENST00000580565 SLAIN2Q9P270 581 aa26.5■■□□□ 1.83
CSNK1D-214ENST00000580565 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
CSNK1D-214ENST00000580565 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
CSNK1D-214ENST00000580565 NCOA3Q9Y6Q9 1424 aa26.46■■□□□ 1.83
CSNK1D-214ENST00000580565 CHD2O14647 1828 aaKnown RBP26.45■■□□□ 1.82
CSNK1D-214ENST00000580565 C14orf37Q86TY3 774 aa26.44■■□□□ 1.82
CSNK1D-214ENST00000580565 DIP2AQ14689 1571 aa26.44■■□□□ 1.82
CSNK1D-214ENST00000580565 AMOTL2Q9Y2J4 779 aa26.43■■□□□ 1.82
CSNK1D-214ENST00000580565 ROBO1Q9Y6N7 1651 aa26.41■■□□□ 1.82
CSNK1D-214ENST00000580565 TRIM52Q96A61 297 aa26.41■■□□□ 1.82
CSNK1D-214ENST00000580565 C19orf44Q9H6X5 657 aa26.4■■□□□ 1.82
CSNK1D-214ENST00000580565 HFM1A2PYH4 1435 aa26.39■■□□□ 1.82
CSNK1D-214ENST00000580565 SPHKAPQ2M3C7 1700 aa26.39■■□□□ 1.82
CSNK1D-214ENST00000580565 TRPM2O94759 1503 aa26.39■■□□□ 1.81
CSNK1D-214ENST00000580565 PTPRUQ92729 1446 aa26.39■■□□□ 1.81
CSNK1D-214ENST00000580565 CADPS2Q86UW7 1296 aa26.37■■□□□ 1.81
CSNK1D-214ENST00000580565 ATF3P18847 181 aa26.36■■□□□ 1.81
CSNK1D-214ENST00000580565 RGS17Q9UGC6 210 aaPredicted RBP26.36■■□□□ 1.81
CSNK1D-214ENST00000580565 SETBP1Q9Y6X0 1596 aa26.34■■□□□ 1.81
CSNK1D-214ENST00000580565 SLC4A1APQ9BWU0 796 aaKnown RBP26.34■■□□□ 1.81
CSNK1D-214ENST00000580565 CLTCL1P53675 1640 aa26.33■■□□□ 1.81
CSNK1D-214ENST00000580565 METP08581 1390 aa26.33■■□□□ 1.8
CSNK1D-214ENST00000580565 NRXN3Q9Y4C0 1643 aa26.3■■□□□ 1.8
CSNK1D-214ENST00000580565 JCADQ9P266 1359 aa26.28■■□□□ 1.8
CSNK1D-214ENST00000580565 NEXMIFQ5QGS0 1516 aa26.28■■□□□ 1.8
CSNK1D-214ENST00000580565 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.26■■□□□ 1.79
CSNK1D-214ENST00000580565 VGFO15240 615 aaPredicted RBP26.26■■□□□ 1.79
CSNK1D-214ENST00000580565 PHLPP1O60346 1717 aa26.24■■□□□ 1.79
CSNK1D-214ENST00000580565 DCCP43146 1447 aa26.23■■□□□ 1.79
CSNK1D-214ENST00000580565 XRN1Q8IZH2 1706 aaKnown RBP26.23■■□□□ 1.79
CSNK1D-214ENST00000580565 RPGRIP1LQ68CZ1 1315 aa26.23■■□□□ 1.79
CSNK1D-214ENST00000580565 BRINP3Q76B58 766 aa26.23■■□□□ 1.79
CSNK1D-214ENST00000580565 FOXD1Q16676 465 aa26.21■■□□□ 1.79
CSNK1D-214ENST00000580565 POTEAQ6S8J7 498 aa26.2■■□□□ 1.78
CSNK1D-214ENST00000580565 COL16A1Q07092 1604 aaPredicted RBP26.19■■□□□ 1.78
CSNK1D-214ENST00000580565 KIF1BO60333 1816 aa26.18■■□□□ 1.78
CSNK1D-214ENST00000580565 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
CSNK1D-214ENST00000580565 SPATA31A6Q5VVP1 1343 aa26.16■■□□□ 1.78
CSNK1D-214ENST00000580565 MST1RQ04912 1400 aa26.15■■□□□ 1.78
CSNK1D-214ENST00000580565 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
CSNK1D-214ENST00000580565 ADGRL3Q9HAR2 1447 aa26.14■■□□□ 1.78
CSNK1D-214ENST00000580565 ROBO2Q9HCK4 1378 aa26.1■■□□□ 1.77
CSNK1D-214ENST00000580565 ASXL1Q8IXJ9 1541 aa26.1■■□□□ 1.77
CSNK1D-214ENST00000580565 CCDC144AA2RUR9 1427 aa26.1■■□□□ 1.77
CSNK1D-214ENST00000580565 PTCH1Q13635 1447 aa26.09■■□□□ 1.77
CSNK1D-214ENST00000580565 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-214ENST00000580565 LRP6O75581 1613 aa26.08■■□□□ 1.77
CSNK1D-214ENST00000580565 RGL3Q3MIN7 710 aa26.08■■□□□ 1.77
CSNK1D-214ENST00000580565 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 ADGRF5Q8IZF2 1346 aa26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 ACIN1Q9UKV3 1341 aaKnown RBP26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 SPATA31E1Q6ZUB1 1445 aa26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
CSNK1D-214ENST00000580565 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
CSNK1D-214ENST00000580565 NUTM2BA6NNL0 878 aaPredicted RBP26.03■■□□□ 1.76
CSNK1D-214ENST00000580565 NUTM2EB1AL46 878 aaPredicted RBP26.03■■□□□ 1.76
CSNK1D-214ENST00000580565 NUTM2AQ8IVF1 878 aaPredicted RBP26.03■■□□□ 1.76
CSNK1D-214ENST00000580565 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
CSNK1D-214ENST00000580565 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
CSNK1D-214ENST00000580565 SHPRHQ149N8 1683 aa26.02■■□□□ 1.76
CSNK1D-214ENST00000580565 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
CSNK1D-214ENST00000580565 PPLO60437 1756 aa26.01■■□□□ 1.75
CSNK1D-214ENST00000580565 ZNF772Q68DY9 489 aaPredicted RBP26.01■■□□□ 1.75
CSNK1D-214ENST00000580565 ANKRD30BQ9BXX2 1392 aa26.01■■□□□ 1.75
CSNK1D-214ENST00000580565 ORAI2Q96SN7 254 aa25.98■■□□□ 1.75
CSNK1D-214ENST00000580565 NHSL1Q5SYE7 1610 aa25.97■■□□□ 1.75
CSNK1D-214ENST00000580565 STK26Q9P289 416 aa25.95■■□□□ 1.74
CSNK1D-214ENST00000580565 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
CSNK1D-214ENST00000580565 TMEM132EQ6IEE7 984 aa25.93■■□□□ 1.74
CSNK1D-214ENST00000580565 LRPPRCP42704 1394 aaKnown RBP25.92■■□□□ 1.74
CSNK1D-214ENST00000580565 SOS2Q07890 1332 aaPredicted RBP25.91■■□□□ 1.74
CSNK1D-214ENST00000580565 WAPLQ7Z5K2 1190 aa25.91■■□□□ 1.74
CSNK1D-214ENST00000580565 ABCC11Q96J66 1382 aa25.91■■□□□ 1.74
CSNK1D-214ENST00000580565 TECPR2O15040 1411 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms