RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 RPRD2Q5VT52 1461 aaKnown RBP37.58■■■■□ 3.61
CDC42EP4-205ENST00000580315 PROSER2Q86WR7 435 aaPredicted RBP37.58■■■■□ 3.61
CDC42EP4-205ENST00000580315 UNC13BO14795 1591 aa37.56■■■■□ 3.6
CDC42EP4-205ENST00000580315 RBM33Q96EV2 1170 aaKnown RBP37.55■■■■□ 3.6
CDC42EP4-205ENST00000580315 BCANQ96GW7 911 aa37.53■■■■□ 3.6
CDC42EP4-205ENST00000580315 NUP155O75694 1391 aa37.49■■■■□ 3.59
CDC42EP4-205ENST00000580315 NKTRP30414 1462 aaKnown RBP37.48■■■■□ 3.59
CDC42EP4-205ENST00000580315 ZFYVE9O95405 1425 aa37.48■■■■□ 3.59
CDC42EP4-205ENST00000580315 NWD1Q149M9 1564 aa37.46■■■■□ 3.59
CDC42EP4-205ENST00000580315 RGS17Q9UGC6 210 aaPredicted RBP37.46■■■■□ 3.59
CDC42EP4-205ENST00000580315 PLEKHG1Q9ULL1 1385 aa37.44■■■■□ 3.58
CDC42EP4-205ENST00000580315 NAIPQ13075 1403 aa37.44■■■■□ 3.58
CDC42EP4-205ENST00000580315 HDGFP51858 240 aaKnown RBP37.43■■■■□ 3.58
CDC42EP4-205ENST00000580315 RIMS2Q9UQ26 1411 aa37.43■■■■□ 3.58
CDC42EP4-205ENST00000580315 PPP1R15AO75807 674 aaPredicted RBP37.42■■■■□ 3.58
CDC42EP4-205ENST00000580315 IQGAP3Q86VI3 1631 aa37.42■■■■□ 3.58
CDC42EP4-205ENST00000580315 ROBO1Q9Y6N7 1651 aa37.4■■■■□ 3.58
CDC42EP4-205ENST00000580315 TMEM131LA2VDJ0 1609 aa37.39■■■■□ 3.58
CDC42EP4-205ENST00000580315 HFM1A2PYH4 1435 aa37.39■■■■□ 3.58
CDC42EP4-205ENST00000580315 MSH6P52701 1360 aa37.39■■■■□ 3.58
CDC42EP4-205ENST00000580315 GCC2Q8IWJ2 1684 aa37.38■■■■□ 3.57
CDC42EP4-205ENST00000580315 MYO5BQ9ULV0 1848 aa37.37■■■■□ 3.57
CDC42EP4-205ENST00000580315 CHGAP10645 457 aaKnown RBP37.35■■■■□ 3.57
CDC42EP4-205ENST00000580315 SLAIN2Q9P270 581 aa37.35■■■■□ 3.57
CDC42EP4-205ENST00000580315 TBX22Q9Y458 520 aa37.34■■■■□ 3.57
CDC42EP4-205ENST00000580315 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.33■■■■□ 3.57
CDC42EP4-205ENST00000580315 CHD2O14647 1828 aaKnown RBP37.31■■■■□ 3.56
CDC42EP4-205ENST00000580315 E9PCH4 1651 aa37.29■■■■□ 3.56
CDC42EP4-205ENST00000580315 NUTM2DQ5VT03 806 aaPredicted RBP37.28■■■■□ 3.56
CDC42EP4-205ENST00000580315 ADAMTS13Q76LX8 1427 aa37.25■■■■□ 3.55
CDC42EP4-205ENST00000580315 TRIM52Q96A61 297 aa37.24■■■■□ 3.55
CDC42EP4-205ENST00000580315 NCOA3Q9Y6Q9 1424 aa37.23■■■■□ 3.55
CDC42EP4-205ENST00000580315 POTEAQ6S8J7 498 aa37.22■■■■□ 3.55
CDC42EP4-205ENST00000580315 PIK3R4Q99570 1358 aa37.17■■■■□ 3.54
CDC42EP4-205ENST00000580315 C14orf37Q86TY3 774 aa37.17■■■■□ 3.54
CDC42EP4-205ENST00000580315 DIP2AQ14689 1571 aa37.16■■■■□ 3.54
CDC42EP4-205ENST00000580315 PHLPP1O60346 1717 aa37.16■■■■□ 3.54
CDC42EP4-205ENST00000580315 JCADQ9P266 1359 aa37.16■■■■□ 3.54
CDC42EP4-205ENST00000580315 C19orf44Q9H6X5 657 aa37.13■■■■□ 3.53
CDC42EP4-205ENST00000580315 CADPS2Q86UW7 1296 aa37.1■■■■□ 3.53
CDC42EP4-205ENST00000580315 SLC4A1APQ9BWU0 796 aaKnown RBP37.09■■■■□ 3.53
CDC42EP4-205ENST00000580315 AMOTL2Q9Y2J4 779 aa37.08■■■■□ 3.53
CDC42EP4-205ENST00000580315 ATF3P18847 181 aa37.07■■■■□ 3.52
CDC42EP4-205ENST00000580315 COL16A1Q07092 1604 aaPredicted RBP37.07■■■■□ 3.52
CDC42EP4-205ENST00000580315 TRPM2O94759 1503 aa37.06■■■■□ 3.52
CDC42EP4-205ENST00000580315 PTPRUQ92729 1446 aa37.06■■■■□ 3.52
CDC42EP4-205ENST00000580315 ACIN1Q9UKV3 1341 aaKnown RBP37.05■■■■□ 3.52
CDC42EP4-205ENST00000580315 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.05■■■■□ 3.52
CDC42EP4-205ENST00000580315 SPHKAPQ2M3C7 1700 aa37.02■■■■□ 3.52
CDC42EP4-205ENST00000580315 SETD5Q9C0A6 1442 aa37.02■■■■□ 3.52
CDC42EP4-205ENST00000580315 SPATA31A6Q5VVP1 1343 aa36.98■■■■□ 3.51
CDC42EP4-205ENST00000580315 AHDC1Q5TGY3 1603 aaPredicted RBP36.96■■■■□ 3.51
CDC42EP4-205ENST00000580315 ZNF326Q5BKZ1 582 aaKnown RBP36.96■■■■□ 3.51
CDC42EP4-205ENST00000580315 SETBP1Q9Y6X0 1596 aa36.95■■■■□ 3.51
CDC42EP4-205ENST00000580315 BRINP3Q76B58 766 aa36.94■■■■□ 3.5
CDC42EP4-205ENST00000580315 NRXN3Q9Y4C0 1643 aa36.94■■■■□ 3.5
CDC42EP4-205ENST00000580315 LRP6O75581 1613 aa36.93■■■■□ 3.5
CDC42EP4-205ENST00000580315 DCCP43146 1447 aa36.91■■■■□ 3.5
CDC42EP4-205ENST00000580315 MPHOSPH9Q99550 1183 aa36.9■■■■□ 3.5
CDC42EP4-205ENST00000580315 METP08581 1390 aa36.9■■■■□ 3.5
CDC42EP4-205ENST00000580315 XRN1Q8IZH2 1706 aaKnown RBP36.89■■■■□ 3.5
CDC42EP4-205ENST00000580315 MEX3CQ5U5Q3 659 aaKnown RBP36.88■■■■□ 3.49
CDC42EP4-205ENST00000580315 CLTCL1P53675 1640 aa36.87■■■■□ 3.49
CDC42EP4-205ENST00000580315 RAB3GAP2Q9H2M9 1393 aa36.86■■■■□ 3.49
CDC42EP4-205ENST00000580315 SHPRHQ149N8 1683 aa36.84■■■■□ 3.49
CDC42EP4-205ENST00000580315 FOXD1Q16676 465 aa36.82■■■■□ 3.48
CDC42EP4-205ENST00000580315 ZNF772Q68DY9 489 aaPredicted RBP36.82■■■■□ 3.48
CDC42EP4-205ENST00000580315 MST1RQ04912 1400 aa36.81■■■■□ 3.48
CDC42EP4-205ENST00000580315 NEXMIFQ5QGS0 1516 aa36.8■■■■□ 3.48
CDC42EP4-205ENST00000580315 ASXL1Q8IXJ9 1541 aa36.8■■■■□ 3.48
CDC42EP4-205ENST00000580315 SETD1AO15047 1707 aaKnown RBP36.79■■■■□ 3.48
CDC42EP4-205ENST00000580315 NUTM2BA6NNL0 878 aaPredicted RBP36.75■■■■□ 3.47
CDC42EP4-205ENST00000580315 NUTM2EB1AL46 878 aaPredicted RBP36.75■■■■□ 3.47
CDC42EP4-205ENST00000580315 NUTM2AQ8IVF1 878 aaPredicted RBP36.75■■■■□ 3.47
CDC42EP4-205ENST00000580315 ADGRL3Q9HAR2 1447 aa36.75■■■■□ 3.47
CDC42EP4-205ENST00000580315 CCDC144AA2RUR9 1427 aa36.73■■■■□ 3.47
CDC42EP4-205ENST00000580315 KIF1BO60333 1816 aa36.73■■■■□ 3.47
CDC42EP4-205ENST00000580315 HRCP23327 699 aa36.71■■■■□ 3.47
CDC42EP4-205ENST00000580315 LRRC59Q96AG4 307 aaKnown RBP36.69■■■■□ 3.46
CDC42EP4-205ENST00000580315 NHSL1Q5SYE7 1610 aa36.67■■■■□ 3.46
CDC42EP4-205ENST00000580315 RPGRIP1LQ68CZ1 1315 aa36.67■■■■□ 3.46
CDC42EP4-205ENST00000580315 DDX17Q92841 729 aaKnown RBP36.67■■■■□ 3.46
CDC42EP4-205ENST00000580315 VGFO15240 615 aaPredicted RBP36.66■■■■□ 3.46
CDC42EP4-205ENST00000580315 RXRBP28702 533 aa36.65■■■■□ 3.46
CDC42EP4-205ENST00000580315 NALCNQ8IZF0 1738 aa36.63■■■■□ 3.45
CDC42EP4-205ENST00000580315 AFF2P51816 1311 aa36.61■■■■□ 3.45
CDC42EP4-205ENST00000580315 PTCH1Q13635 1447 aa36.6■■■■□ 3.45
CDC42EP4-205ENST00000580315 UPF1Q92900 1129 aaKnown RBP eCLIP36.6■■■■□ 3.45
CDC42EP4-205ENST00000580315 C1orf167Q5SNV9 1468 aa36.59■■■■□ 3.45
CDC42EP4-205ENST00000580315 PNPLA6Q8IY17 1366 aa36.58■■■■□ 3.45
CDC42EP4-205ENST00000580315 ROBO2Q9HCK4 1378 aa36.58■■■■□ 3.45
CDC42EP4-205ENST00000580315 RGL3Q3MIN7 710 aa36.53■■■■□ 3.44
CDC42EP4-205ENST00000580315 C8orf37Q96NL8 207 aa36.53■■■■□ 3.44
CDC42EP4-205ENST00000580315 CDK12Q9NYV4 1490 aaPredicted RBP36.53■■■■□ 3.44
CDC42EP4-205ENST00000580315 SPATA31E1Q6ZUB1 1445 aa36.52■■■■□ 3.44
CDC42EP4-205ENST00000580315 PRAG1Q86YV5 1406 aa36.51■■■■□ 3.44
CDC42EP4-205ENST00000580315 ORAI2Q96SN7 254 aa36.5■■■■□ 3.43
CDC42EP4-205ENST00000580315 ANKRD30BQ9BXX2 1392 aa36.46■■■■□ 3.43
CDC42EP4-205ENST00000580315 SOS2Q07890 1332 aaPredicted RBP36.46■■■■□ 3.43
CDC42EP4-205ENST00000580315 QTRT2Q9H974 415 aaKnown RBP36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms