RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 TMF1P82094 1093 aa12.91□□□□□ -0.34
LINC00909-202ENST00000580048 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
LINC00909-202ENST00000580048 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
LINC00909-202ENST00000580048 PDE3AQ14432 1141 aa12.9□□□□□ -0.34
LINC00909-202ENST00000580048 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
LINC00909-202ENST00000580048 E9PSI1 815 aa12.9□□□□□ -0.34
LINC00909-202ENST00000580048 TNNQ9UQP3 1299 aa12.9□□□□□ -0.34
LINC00909-202ENST00000580048 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.35
LINC00909-202ENST00000580048 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
LINC00909-202ENST00000580048 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
LINC00909-202ENST00000580048 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
LINC00909-202ENST00000580048 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
LINC00909-202ENST00000580048 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
LINC00909-202ENST00000580048 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
LINC00909-202ENST00000580048 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
LINC00909-202ENST00000580048 FGD1P98174 961 aa12.86□□□□□ -0.35
LINC00909-202ENST00000580048 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
LINC00909-202ENST00000580048 INSRP06213 1382 aa12.86□□□□□ -0.35
LINC00909-202ENST00000580048 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
LINC00909-202ENST00000580048 RLBP1P12271 317 aa12.86□□□□□ -0.35
LINC00909-202ENST00000580048 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
LINC00909-202ENST00000580048 KIAA0586Q9BVV6 1533 aa12.85□□□□□ -0.35
LINC00909-202ENST00000580048 TESK2Q96S53 571 aa12.85□□□□□ -0.35
LINC00909-202ENST00000580048 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
LINC00909-202ENST00000580048 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
LINC00909-202ENST00000580048 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
LINC00909-202ENST00000580048 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
LINC00909-202ENST00000580048 ANKRD50Q9ULJ7 1429 aa12.84□□□□□ -0.35
LINC00909-202ENST00000580048 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
LINC00909-202ENST00000580048 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
LINC00909-202ENST00000580048 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
LINC00909-202ENST00000580048 SAMD9Q5K651 1589 aa12.83□□□□□ -0.35
LINC00909-202ENST00000580048 SMAP1Q8IYB5 467 aaPredicted RBP12.83□□□□□ -0.36
LINC00909-202ENST00000580048 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.36
LINC00909-202ENST00000580048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00909-202ENST00000580048 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
LINC00909-202ENST00000580048 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
LINC00909-202ENST00000580048 SSFA2P28290 1259 aa12.82□□□□□ -0.36
LINC00909-202ENST00000580048 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
LINC00909-202ENST00000580048 NESP48681 1621 aa12.81□□□□□ -0.36
LINC00909-202ENST00000580048 DNTTIP2Q5QJE6 756 aaKnown RBP12.81□□□□□ -0.36
LINC00909-202ENST00000580048 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
LINC00909-202ENST00000580048 E9PCH4 1651 aa12.81□□□□□ -0.36
LINC00909-202ENST00000580048 CUL7Q14999 1698 aa12.81□□□□□ -0.36
LINC00909-202ENST00000580048 DNMT1P26358 1616 aaKnown RBP12.81□□□□□ -0.36
LINC00909-202ENST00000580048 TNNT2P45379 298 aaPredicted RBP12.8□□□□□ -0.36
LINC00909-202ENST00000580048 RAB3GAP1Q15042 981 aa12.8□□□□□ -0.36
LINC00909-202ENST00000580048 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
LINC00909-202ENST00000580048 PDE4CQ08493 712 aa12.79□□□□□ -0.36
LINC00909-202ENST00000580048 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
LINC00909-202ENST00000580048 TERF1P54274 439 aa12.79□□□□□ -0.36
LINC00909-202ENST00000580048 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
LINC00909-202ENST00000580048 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
LINC00909-202ENST00000580048 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
LINC00909-202ENST00000580048 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 PTMSP20962 102 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
LINC00909-202ENST00000580048 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
LINC00909-202ENST00000580048 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
LINC00909-202ENST00000580048 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
LINC00909-202ENST00000580048 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
LINC00909-202ENST00000580048 DYNC1I1O14576 645 aa12.77□□□□□ -0.36
LINC00909-202ENST00000580048 SMC5Q8IY18 1101 aa12.77□□□□□ -0.36
LINC00909-202ENST00000580048 CBX1P83916 185 aa12.77□□□□□ -0.37
LINC00909-202ENST00000580048 TSC1Q92574 1164 aa12.77□□□□□ -0.37
LINC00909-202ENST00000580048 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
LINC00909-202ENST00000580048 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
LINC00909-202ENST00000580048 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
LINC00909-202ENST00000580048 MPNDQ8N594 471 aa12.76□□□□□ -0.37
LINC00909-202ENST00000580048 JARID2Q92833 1246 aaPredicted RBP12.76□□□□□ -0.37
LINC00909-202ENST00000580048 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
LINC00909-202ENST00000580048 PRAG1Q86YV5 1406 aa12.76□□□□□ -0.37
LINC00909-202ENST00000580048 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
LINC00909-202ENST00000580048 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
LINC00909-202ENST00000580048 CSPP1Q1MSJ5 1256 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 KLHL40Q2TBA0 621 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 DDIT3P35638 169 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
LINC00909-202ENST00000580048 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
LINC00909-202ENST00000580048 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
LINC00909-202ENST00000580048 ZKSCAN5Q9Y2L8 839 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 ZNF500O60304 480 aaPredicted RBP12.74□□□□□ -0.37
LINC00909-202ENST00000580048 DMTNQ08495 405 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
LINC00909-202ENST00000580048 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
LINC00909-202ENST00000580048 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms