RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 JCADQ9P266 1359 aa19.14■□□□□ 0.65
CDK5RAP3-216ENST00000579853 ADGRB3O60242 1522 aa19.14■□□□□ 0.65
CDK5RAP3-216ENST00000579853 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP3-216ENST00000579853 PHLPP1O60346 1717 aa19.1■□□□□ 0.65
CDK5RAP3-216ENST00000579853 RPRD2Q5VT52 1461 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-216ENST00000579853 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
CDK5RAP3-216ENST00000579853 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
CDK5RAP3-216ENST00000579853 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
CDK5RAP3-216ENST00000579853 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.65
CDK5RAP3-216ENST00000579853 PPP1R15AO75807 674 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-216ENST00000579853 CHD2O14647 1828 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-216ENST00000579853 SPATA31A6Q5VVP1 1343 aa19.06■□□□□ 0.64
CDK5RAP3-216ENST00000579853 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
CDK5RAP3-216ENST00000579853 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
CDK5RAP3-216ENST00000579853 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
CDK5RAP3-216ENST00000579853 ZNF772Q68DY9 489 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-216ENST00000579853 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDK5RAP3-216ENST00000579853 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
CDK5RAP3-216ENST00000579853 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
CDK5RAP3-216ENST00000579853 SRCAPQ6ZRS2 3230 aa19.02■□□□□ 0.64
CDK5RAP3-216ENST00000579853 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
CDK5RAP3-216ENST00000579853 CADPS2Q86UW7 1296 aa19.02■□□□□ 0.64
CDK5RAP3-216ENST00000579853 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP3-216ENST00000579853 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-216ENST00000579853 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
CDK5RAP3-216ENST00000579853 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
CDK5RAP3-216ENST00000579853 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
CDK5RAP3-216ENST00000579853 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
CDK5RAP3-216ENST00000579853 ADRA2BP18089 450 aa18.99■□□□□ 0.63
CDK5RAP3-216ENST00000579853 ATF3P18847 181 aa18.99■□□□□ 0.63
CDK5RAP3-216ENST00000579853 GCC2Q8IWJ2 1684 aa18.98■□□□□ 0.63
CDK5RAP3-216ENST00000579853 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
CDK5RAP3-216ENST00000579853 TMEM131LA2VDJ0 1609 aa18.97■□□□□ 0.63
CDK5RAP3-216ENST00000579853 DIP2AQ14689 1571 aa18.97■□□□□ 0.63
CDK5RAP3-216ENST00000579853 AHDC1Q5TGY3 1603 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-216ENST00000579853 UPF1Q92900 1129 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDK5RAP3-216ENST00000579853 LRP6O75581 1613 aa18.95■□□□□ 0.62
CDK5RAP3-216ENST00000579853 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
CDK5RAP3-216ENST00000579853 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-216ENST00000579853 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-216ENST00000579853 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
CDK5RAP3-216ENST00000579853 RXRBP28702 533 aa18.92■□□□□ 0.62
CDK5RAP3-216ENST00000579853 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-216ENST00000579853 TRIM52Q96A61 297 aa18.91■□□□□ 0.62
CDK5RAP3-216ENST00000579853 DCCP43146 1447 aa18.91■□□□□ 0.62
CDK5RAP3-216ENST00000579853 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-216ENST00000579853 TRPM2O94759 1503 aa18.9■□□□□ 0.62
CDK5RAP3-216ENST00000579853 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
CDK5RAP3-216ENST00000579853 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
CDK5RAP3-216ENST00000579853 UNC13BO14795 1591 aa18.88■□□□□ 0.61
CDK5RAP3-216ENST00000579853 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-216ENST00000579853 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-216ENST00000579853 E9PCH4 1651 aa18.85■□□□□ 0.61
CDK5RAP3-216ENST00000579853 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
CDK5RAP3-216ENST00000579853 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-216ENST00000579853 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-216ENST00000579853 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-216ENST00000579853 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-216ENST00000579853 AFF2P51816 1311 aa18.83■□□□□ 0.61
CDK5RAP3-216ENST00000579853 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
CDK5RAP3-216ENST00000579853 ROCK1Q13464 1354 aa18.81■□□□□ 0.6
CDK5RAP3-216ENST00000579853 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
CDK5RAP3-216ENST00000579853 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
CDK5RAP3-216ENST00000579853 MST1RQ04912 1400 aa18.79■□□□□ 0.6
CDK5RAP3-216ENST00000579853 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
CDK5RAP3-216ENST00000579853 RBM6P78332 1123 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-216ENST00000579853 NUP155O75694 1391 aa18.78■□□□□ 0.6
CDK5RAP3-216ENST00000579853 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-216ENST00000579853 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.6
CDK5RAP3-216ENST00000579853 QTRT2Q9H974 415 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-216ENST00000579853 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 NGLY1Q96IV0 654 aa18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 EP400Q96L91 3159 aa18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 NRXN3Q9Y4C0 1643 aa18.74■□□□□ 0.59
CDK5RAP3-216ENST00000579853 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
CDK5RAP3-216ENST00000579853 RGS12O14924 1447 aa18.72■□□□□ 0.59
CDK5RAP3-216ENST00000579853 MSH5O43196 834 aa18.71■□□□□ 0.59
CDK5RAP3-216ENST00000579853 METP08581 1390 aa18.7■□□□□ 0.58
CDK5RAP3-216ENST00000579853 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
CDK5RAP3-216ENST00000579853 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
CDK5RAP3-216ENST00000579853 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-216ENST00000579853 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
CDK5RAP3-216ENST00000579853 C1orf167Q5SNV9 1468 aa18.65■□□□□ 0.58
CDK5RAP3-216ENST00000579853 LAMC1P11047 1609 aa18.65■□□□□ 0.58
CDK5RAP3-216ENST00000579853 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
CDK5RAP3-216ENST00000579853 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CDK5RAP3-216ENST00000579853 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-216ENST00000579853 SOS2Q07890 1332 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-216ENST00000579853 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
CDK5RAP3-216ENST00000579853 NEXMIFQ5QGS0 1516 aa18.62■□□□□ 0.57
CDK5RAP3-216ENST00000579853 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP3-216ENST00000579853 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP3-216ENST00000579853 ITGAEP38570 1179 aa18.6■□□□□ 0.57
CDK5RAP3-216ENST00000579853 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
CDK5RAP3-216ENST00000579853 KIF1BO60333 1816 aa18.59■□□□□ 0.57
CDK5RAP3-216ENST00000579853 CCDC125Q86Z20 511 aa18.59■□□□□ 0.57
CDK5RAP3-216ENST00000579853 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
CDK5RAP3-216ENST00000579853 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms