RNA–Protein interactions for RNA: ENST00000579475.7

NOTCH2-206, Transcript of notch 2, humanhuman

TSL 1 (best) BASIC

Gene NOTCH2, Length 2,954 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-206ENST00000579475 SYNMO15061 1565 aa10.65□□□□□ -0.7
NOTCH2-206ENST00000579475 NPC1L1Q9UHC9 1359 aa10.65□□□□□ -0.7
NOTCH2-206ENST00000579475 NBPF1Q3BBV0 1214 aa10.65□□□□□ -0.7
NOTCH2-206ENST00000579475 ABCA8O94911 1581 aa10.65□□□□□ -0.7
NOTCH2-206ENST00000579475 AAMPQ13685 434 aa10.65□□□□□ -0.71
NOTCH2-206ENST00000579475 CGNL1Q0VF96 1302 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 WDR7Q9Y4E6 1490 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 CDCA8Q53HL2 280 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 MAST1Q9Y2H9 1570 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 PLXNC1O60486 1568 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 RGS3P49796 1198 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 KNSTRNQ9Y448 316 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 IQGAP3Q86VI3 1631 aa10.64□□□□□ -0.71
NOTCH2-206ENST00000579475 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
NOTCH2-206ENST00000579475 PLA2R1Q13018 1463 aa10.63□□□□□ -0.71
NOTCH2-206ENST00000579475 USP19O94966 1318 aa10.63□□□□□ -0.71
NOTCH2-206ENST00000579475 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
NOTCH2-206ENST00000579475 E9PSI1 815 aa10.62□□□□□ -0.71
NOTCH2-206ENST00000579475 MAGI2Q86UL8 1455 aa10.62□□□□□ -0.71
NOTCH2-206ENST00000579475 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
NOTCH2-206ENST00000579475 IQGAP1P46940 1657 aa10.61□□□□□ -0.71
NOTCH2-206ENST00000579475 PREX2Q70Z35 1606 aa10.61□□□□□ -0.71
NOTCH2-206ENST00000579475 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
NOTCH2-206ENST00000579475 UPF2Q9HAU5 1272 aaKnown RBP10.6□□□□□ -0.71
NOTCH2-206ENST00000579475 ATP10BO94823 1461 aa10.6□□□□□ -0.71
NOTCH2-206ENST00000579475 SAMD9LQ8IVG5 1584 aa10.6□□□□□ -0.71
NOTCH2-206ENST00000579475 NLRP1Q9C000 1473 aa10.6□□□□□ -0.71
NOTCH2-206ENST00000579475 RGL3Q3MIN7 710 aa10.59□□□□□ -0.71
NOTCH2-206ENST00000579475 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
NOTCH2-206ENST00000579475 POGKQ9P215 609 aa10.59□□□□□ -0.71
NOTCH2-206ENST00000579475 ANTXR1Q9H6X2 564 aa10.59□□□□□ -0.71
NOTCH2-206ENST00000579475 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
NOTCH2-206ENST00000579475 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
NOTCH2-206ENST00000579475 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
NOTCH2-206ENST00000579475 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
NOTCH2-206ENST00000579475 PMFBP1Q8TBY8 1022 aa10.57□□□□□ -0.72
NOTCH2-206ENST00000579475 SCAPERQ9BY12 1400 aa10.57□□□□□ -0.72
NOTCH2-206ENST00000579475 MADDQ8WXG6 1647 aa10.57□□□□□ -0.72
NOTCH2-206ENST00000579475 IGHDP01880 384 aa10.57□□□□□ -0.72
NOTCH2-206ENST00000579475 SCAF11Q99590 1463 aaKnown RBP10.56□□□□□ -0.72
NOTCH2-206ENST00000579475 MYOM1P52179 1685 aa10.56□□□□□ -0.72
NOTCH2-206ENST00000579475 GOLGA6L3A6NEY3 463 aa10.56□□□□□ -0.72
NOTCH2-206ENST00000579475 TBC1D32Q96NH3 1257 aa10.56□□□□□ -0.72
NOTCH2-206ENST00000579475 RRAGDQ9NQL2 400 aaPredicted RBP10.56□□□□□ -0.72
NOTCH2-206ENST00000579475 CENPJQ9HC77 1338 aaPredicted RBP10.55□□□□□ -0.72
NOTCH2-206ENST00000579475 DUOX2Q9NRD8 1548 aa10.55□□□□□ -0.72
NOTCH2-206ENST00000579475 FSD2A1L4K1 749 aa10.55□□□□□ -0.72
NOTCH2-206ENST00000579475 BCAR3O75815 825 aa10.55□□□□□ -0.72
NOTCH2-206ENST00000579475 ISY1Q9ULR0 285 aaKnown RBP10.55□□□□□ -0.72
NOTCH2-206ENST00000579475 CLCN1P35523 988 aa10.54□□□□□ -0.72
NOTCH2-206ENST00000579475 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
NOTCH2-206ENST00000579475 APAF1O14727 1248 aa10.54□□□□□ -0.72
NOTCH2-206ENST00000579475 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
NOTCH2-206ENST00000579475 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 TTC37Q6PGP7 1564 aa10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 SEC24BO95487 1268 aa10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 KIAA1210Q9ULL0 1709 aa10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 CANXP27824 592 aaKnown RBP10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
NOTCH2-206ENST00000579475 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
NOTCH2-206ENST00000579475 PNNQ9H307 717 aaKnown RBP10.52□□□□□ -0.73
NOTCH2-206ENST00000579475 XRCC6P12956 609 aaKnown RBP eCLIP10.51□□□□□ -0.73
NOTCH2-206ENST00000579475 MCM4P33991 863 aa10.51□□□□□ -0.73
NOTCH2-206ENST00000579475 MRE11P49959 708 aa10.51□□□□□ -0.73
NOTCH2-206ENST00000579475 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
NOTCH2-206ENST00000579475 POLR3AO14802 1390 aaPredicted RBP10.51□□□□□ -0.73
NOTCH2-206ENST00000579475 CHMP5Q9NZZ3 219 aa10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 CEP152O94986 1710 aa10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 RRP9O43818 475 aaKnown RBP10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 RWDD1Q9H446 243 aaPredicted RBP10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 NEURL4Q96JN8 1562 aa10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 COG6Q9Y2V7 657 aa10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 TRPM2O94759 1503 aa10.5□□□□□ -0.73
NOTCH2-206ENST00000579475 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
NOTCH2-206ENST00000579475 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
NOTCH2-206ENST00000579475 PKNOX2Q96KN3 472 aa10.49□□□□□ -0.73
NOTCH2-206ENST00000579475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
NOTCH2-206ENST00000579475 ARHGAP5Q13017 1502 aa10.48□□□□□ -0.73
NOTCH2-206ENST00000579475 ERCC6Q03468 1493 aa10.48□□□□□ -0.73
NOTCH2-206ENST00000579475 PANK1Q8TE04 598 aa10.48□□□□□ -0.73
NOTCH2-206ENST00000579475 KANK1Q14678 1352 aa10.48□□□□□ -0.73
NOTCH2-206ENST00000579475 HSP90AA1P07900 732 aaKnown RBP10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 WDR63Q8IWG1 891 aa10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 TRAK2O60296 914 aa10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 NAP1L5Q96NT1 182 aaPredicted RBP10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
NOTCH2-206ENST00000579475 PTMSP20962 102 aa10.46□□□□□ -0.73
NOTCH2-206ENST00000579475 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
NOTCH2-206ENST00000579475 PTPRTO14522 1441 aa10.46□□□□□ -0.74
NOTCH2-206ENST00000579475 IQSEC2Q5JU85 1478 aa10.45□□□□□ -0.74
NOTCH2-206ENST00000579475 HSP90AA2PQ14568 343 aaPredicted RBP10.45□□□□□ -0.74
NOTCH2-206ENST00000579475 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
NOTCH2-206ENST00000579475 ARXQ96QS3 562 aa10.45□□□□□ -0.74
NOTCH2-206ENST00000579475 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms