RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 KDM5AP29375 1690 aaKnown RBP19.82■□□□□ 0.76
TSEN54-206ENST00000579449 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
TSEN54-206ENST00000579449 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
TSEN54-206ENST00000579449 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
TSEN54-206ENST00000579449 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
TSEN54-206ENST00000579449 MYOM2P54296 1465 aa19.79■□□□□ 0.76
TSEN54-206ENST00000579449 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
TSEN54-206ENST00000579449 TRPM1Q7Z4N2 1603 aa19.76■□□□□ 0.75
TSEN54-206ENST00000579449 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
TSEN54-206ENST00000579449 CEP170BQ9Y4F5 1589 aaPredicted RBP19.75■□□□□ 0.75
TSEN54-206ENST00000579449 NUTM2DQ5VT03 806 aaPredicted RBP19.75■□□□□ 0.75
TSEN54-206ENST00000579449 RIMS2Q9UQ26 1411 aa19.75■□□□□ 0.75
TSEN54-206ENST00000579449 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
TSEN54-206ENST00000579449 VGFO15240 615 aaPredicted RBP19.74■□□□□ 0.75
TSEN54-206ENST00000579449 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
TSEN54-206ENST00000579449 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
TSEN54-206ENST00000579449 TMEM2Q9UHN6 1383 aa19.71■□□□□ 0.75
TSEN54-206ENST00000579449 KIAA1210Q9ULL0 1709 aa19.71■□□□□ 0.75
TSEN54-206ENST00000579449 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
TSEN54-206ENST00000579449 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.7■□□□□ 0.74
TSEN54-206ENST00000579449 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
TSEN54-206ENST00000579449 SLIT1O75093 1534 aa19.68■□□□□ 0.74
TSEN54-206ENST00000579449 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
TSEN54-206ENST00000579449 NBPF1Q3BBV0 1214 aa19.68■□□□□ 0.74
TSEN54-206ENST00000579449 ROCK2O75116 1388 aaKnown RBP19.68■□□□□ 0.74
TSEN54-206ENST00000579449 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
TSEN54-206ENST00000579449 CFAP70Q5T0N1 1121 aa19.66■□□□□ 0.74
TSEN54-206ENST00000579449 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
TSEN54-206ENST00000579449 GPRASP1Q5JY77 1395 aa19.65■□□□□ 0.74
TSEN54-206ENST00000579449 LTKP29376 864 aa19.64■□□□□ 0.73
TSEN54-206ENST00000579449 C14orf93Q9H972 538 aaKnown RBP19.64■□□□□ 0.73
TSEN54-206ENST00000579449 LAMC1P11047 1609 aa19.64■□□□□ 0.73
TSEN54-206ENST00000579449 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
TSEN54-206ENST00000579449 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
TSEN54-206ENST00000579449 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
TSEN54-206ENST00000579449 ALKQ9UM73 1620 aa19.61■□□□□ 0.73
TSEN54-206ENST00000579449 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
TSEN54-206ENST00000579449 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
TSEN54-206ENST00000579449 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
TSEN54-206ENST00000579449 NRXN3Q9Y4C0 1643 aa19.6■□□□□ 0.73
TSEN54-206ENST00000579449 SCAF11Q99590 1463 aaKnown RBP19.6■□□□□ 0.73
TSEN54-206ENST00000579449 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
TSEN54-206ENST00000579449 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
TSEN54-206ENST00000579449 USP47Q96K76 1375 aa19.58■□□□□ 0.73
TSEN54-206ENST00000579449 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
TSEN54-206ENST00000579449 SETD1AO15047 1707 aaKnown RBP19.58■□□□□ 0.72
TSEN54-206ENST00000579449 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
TSEN54-206ENST00000579449 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
TSEN54-206ENST00000579449 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
TSEN54-206ENST00000579449 BCANQ96GW7 911 aa19.56■□□□□ 0.72
TSEN54-206ENST00000579449 ASXL1Q8IXJ9 1541 aa19.56■□□□□ 0.72
TSEN54-206ENST00000579449 POLR1AO95602 1720 aaPredicted RBP19.54■□□□□ 0.72
TSEN54-206ENST00000579449 ADAMTS13Q76LX8 1427 aa19.53■□□□□ 0.72
TSEN54-206ENST00000579449 LMTK3Q96Q04 1460 aa19.53■□□□□ 0.72
TSEN54-206ENST00000579449 MED14O60244 1454 aa19.51■□□□□ 0.71
TSEN54-206ENST00000579449 ST20-MTHFSA0A0A6YYL1 179 aa19.5■□□□□ 0.71
TSEN54-206ENST00000579449 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
TSEN54-206ENST00000579449 METP08581 1390 aa19.49■□□□□ 0.71
TSEN54-206ENST00000579449 HSPA2P54652 639 aa19.49■□□□□ 0.71
TSEN54-206ENST00000579449 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
TSEN54-206ENST00000579449 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
TSEN54-206ENST00000579449 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
TSEN54-206ENST00000579449 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
TSEN54-206ENST00000579449 EIF3AQ14152 1382 aaKnown RBP19.47■□□□□ 0.71
TSEN54-206ENST00000579449 STK26Q9P289 416 aa19.47■□□□□ 0.71
TSEN54-206ENST00000579449 TBX22Q9Y458 520 aa19.47■□□□□ 0.71
TSEN54-206ENST00000579449 NPHP4O75161 1426 aaPredicted RBP19.47■□□□□ 0.71
TSEN54-206ENST00000579449 ARHGEF28Q8N1W1 1705 aaKnown RBP19.47■□□□□ 0.71
TSEN54-206ENST00000579449 LRPPRCP42704 1394 aaKnown RBP19.45■□□□□ 0.7
TSEN54-206ENST00000579449 KNDC1Q76NI1 1749 aa19.43■□□□□ 0.7
TSEN54-206ENST00000579449 TESK2Q96S53 571 aa19.42■□□□□ 0.7
TSEN54-206ENST00000579449 ABCC11Q96J66 1382 aa19.42■□□□□ 0.7
TSEN54-206ENST00000579449 STRCQ7RTU9 1775 aa19.42■□□□□ 0.7
TSEN54-206ENST00000579449 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
TSEN54-206ENST00000579449 DLC1Q96QB1 1528 aa19.41■□□□□ 0.7
TSEN54-206ENST00000579449 QRICH2Q9H0J4 1663 aa19.41■□□□□ 0.7
TSEN54-206ENST00000579449 CENPJQ9HC77 1338 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-206ENST00000579449 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-206ENST00000579449 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
TSEN54-206ENST00000579449 TECPR2O15040 1411 aa19.38■□□□□ 0.69
TSEN54-206ENST00000579449 CPS1P31327 1500 aa19.38■□□□□ 0.69
TSEN54-206ENST00000579449 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
TSEN54-206ENST00000579449 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
TSEN54-206ENST00000579449 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
TSEN54-206ENST00000579449 CCDC7Q96M83 1385 aa19.36■□□□□ 0.69
TSEN54-206ENST00000579449 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
TSEN54-206ENST00000579449 POGKQ9P215 609 aa19.36■□□□□ 0.69
TSEN54-206ENST00000579449 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
TSEN54-206ENST00000579449 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
TSEN54-206ENST00000579449 KIF7Q2M1P5 1343 aa19.35■□□□□ 0.69
TSEN54-206ENST00000579449 TMF1P82094 1093 aa19.35■□□□□ 0.69
TSEN54-206ENST00000579449 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
TSEN54-206ENST00000579449 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
TSEN54-206ENST00000579449 SIRT1Q96EB6 747 aa19.35■□□□□ 0.69
TSEN54-206ENST00000579449 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
TSEN54-206ENST00000579449 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
TSEN54-206ENST00000579449 ROBO2Q9HCK4 1378 aa19.33■□□□□ 0.69
TSEN54-206ENST00000579449 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
TSEN54-206ENST00000579449 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
TSEN54-206ENST00000579449 POLR3GLQ9BT43 218 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms