RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 KIF1BO60333 1816 aa22.62■■□□□ 1.21
SLC6A4-205ENST00000579221 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
SLC6A4-205ENST00000579221 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
SLC6A4-205ENST00000579221 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
SLC6A4-205ENST00000579221 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
SLC6A4-205ENST00000579221 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
SLC6A4-205ENST00000579221 VGFO15240 615 aaPredicted RBP22.59■■□□□ 1.21
SLC6A4-205ENST00000579221 NEUROD1Q13562 356 aa22.59■■□□□ 1.21
SLC6A4-205ENST00000579221 BCANQ96GW7 911 aa22.58■■□□□ 1.21
SLC6A4-205ENST00000579221 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
SLC6A4-205ENST00000579221 STRCQ7RTU9 1775 aa22.56■■□□□ 1.2
SLC6A4-205ENST00000579221 NEURL4Q96JN8 1562 aa22.56■■□□□ 1.2
SLC6A4-205ENST00000579221 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
SLC6A4-205ENST00000579221 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
SLC6A4-205ENST00000579221 MED14O60244 1454 aa22.55■■□□□ 1.2
SLC6A4-205ENST00000579221 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
SLC6A4-205ENST00000579221 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
SLC6A4-205ENST00000579221 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.2
SLC6A4-205ENST00000579221 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
SLC6A4-205ENST00000579221 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
SLC6A4-205ENST00000579221 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
SLC6A4-205ENST00000579221 POLR1AO95602 1720 aaPredicted RBP22.5■■□□□ 1.19
SLC6A4-205ENST00000579221 KDM2AQ9Y2K7 1162 aa22.49■■□□□ 1.19
SLC6A4-205ENST00000579221 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
SLC6A4-205ENST00000579221 TBX22Q9Y458 520 aa22.47■■□□□ 1.19
SLC6A4-205ENST00000579221 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
SLC6A4-205ENST00000579221 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
SLC6A4-205ENST00000579221 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
SLC6A4-205ENST00000579221 PPLO60437 1756 aa22.43■■□□□ 1.18
SLC6A4-205ENST00000579221 TONSLQ96HA7 1378 aa22.41■■□□□ 1.18
SLC6A4-205ENST00000579221 MYOM2P54296 1465 aa22.4■■□□□ 1.18
SLC6A4-205ENST00000579221 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
SLC6A4-205ENST00000579221 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
SLC6A4-205ENST00000579221 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
SLC6A4-205ENST00000579221 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
SLC6A4-205ENST00000579221 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SLC6A4-205ENST00000579221 KCNA6P17658 529 aa22.36■■□□□ 1.17
SLC6A4-205ENST00000579221 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
SLC6A4-205ENST00000579221 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
SLC6A4-205ENST00000579221 NRXN1Q9ULB1 1477 aa22.34■■□□□ 1.17
SLC6A4-205ENST00000579221 DIP2AQ14689 1571 aa22.34■■□□□ 1.17
SLC6A4-205ENST00000579221 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
SLC6A4-205ENST00000579221 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
SLC6A4-205ENST00000579221 ALKQ9UM73 1620 aa22.32■■□□□ 1.16
SLC6A4-205ENST00000579221 METP08581 1390 aa22.31■■□□□ 1.16
SLC6A4-205ENST00000579221 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
SLC6A4-205ENST00000579221 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
SLC6A4-205ENST00000579221 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
SLC6A4-205ENST00000579221 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
SLC6A4-205ENST00000579221 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
SLC6A4-205ENST00000579221 PTPRUQ92729 1446 aa22.25■■□□□ 1.15
SLC6A4-205ENST00000579221 STK26Q9P289 416 aa22.24■■□□□ 1.15
SLC6A4-205ENST00000579221 CPS1P31327 1500 aa22.24■■□□□ 1.15
SLC6A4-205ENST00000579221 NBPF8Q3BBV2 869 aa22.23■■□□□ 1.15
SLC6A4-205ENST00000579221 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
SLC6A4-205ENST00000579221 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
SLC6A4-205ENST00000579221 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
SLC6A4-205ENST00000579221 LAMC1P11047 1609 aa22.21■■□□□ 1.15
SLC6A4-205ENST00000579221 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
SLC6A4-205ENST00000579221 CHD2O14647 1828 aaKnown RBP22.21■■□□□ 1.15
SLC6A4-205ENST00000579221 ABCC11Q96J66 1382 aa22.2■■□□□ 1.14
SLC6A4-205ENST00000579221 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
SLC6A4-205ENST00000579221 NWD1Q149M9 1564 aa22.19■■□□□ 1.14
SLC6A4-205ENST00000579221 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
SLC6A4-205ENST00000579221 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
SLC6A4-205ENST00000579221 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
SLC6A4-205ENST00000579221 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
SLC6A4-205ENST00000579221 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
SLC6A4-205ENST00000579221 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
SLC6A4-205ENST00000579221 STRCP1A6NGW2 1772 aa22.16■■□□□ 1.14
SLC6A4-205ENST00000579221 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
SLC6A4-205ENST00000579221 KIAA1210Q9ULL0 1709 aa22.15■■□□□ 1.14
SLC6A4-205ENST00000579221 ASXL1Q8IXJ9 1541 aa22.15■■□□□ 1.14
SLC6A4-205ENST00000579221 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
SLC6A4-205ENST00000579221 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
SLC6A4-205ENST00000579221 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.13
SLC6A4-205ENST00000579221 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
SLC6A4-205ENST00000579221 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
SLC6A4-205ENST00000579221 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
SLC6A4-205ENST00000579221 POGKQ9P215 609 aa22.12■■□□□ 1.13
SLC6A4-205ENST00000579221 TECPR2O15040 1411 aa22.12■■□□□ 1.13
SLC6A4-205ENST00000579221 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
SLC6A4-205ENST00000579221 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
SLC6A4-205ENST00000579221 CARD11Q9BXL7 1154 aa22.11■■□□□ 1.13
SLC6A4-205ENST00000579221 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
SLC6A4-205ENST00000579221 IQSEC2Q5JU85 1478 aa22.09■■□□□ 1.13
SLC6A4-205ENST00000579221 FAM135BQ49AJ0 1406 aa22.09■■□□□ 1.13
SLC6A4-205ENST00000579221 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
SLC6A4-205ENST00000579221 C19orf44Q9H6X5 657 aa22.09■■□□□ 1.13
SLC6A4-205ENST00000579221 MSH6P52701 1360 aa22.07■■□□□ 1.12
SLC6A4-205ENST00000579221 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
SLC6A4-205ENST00000579221 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
SLC6A4-205ENST00000579221 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
SLC6A4-205ENST00000579221 TOM1O60784 492 aa22.05■■□□□ 1.12
SLC6A4-205ENST00000579221 SAFB2Q14151 953 aaKnown RBP eCLIP22.05■■□□□ 1.12
SLC6A4-205ENST00000579221 PLEKHH1Q9ULM0 1364 aa22.04■■□□□ 1.12
SLC6A4-205ENST00000579221 KNDC1Q76NI1 1749 aa22.04■■□□□ 1.12
SLC6A4-205ENST00000579221 ATF3P18847 181 aa22.04■■□□□ 1.12
SLC6A4-205ENST00000579221 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
SLC6A4-205ENST00000579221 UBAP1LF5GYI3 381 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms