RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
TTC39C-206ENST00000579214 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
TTC39C-206ENST00000579214 KDM5AP29375 1690 aaKnown RBP13.93□□□□□ -0.18
TTC39C-206ENST00000579214 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
TTC39C-206ENST00000579214 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
TTC39C-206ENST00000579214 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
TTC39C-206ENST00000579214 PPLO60437 1756 aa13.91□□□□□ -0.18
TTC39C-206ENST00000579214 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
TTC39C-206ENST00000579214 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
TTC39C-206ENST00000579214 BCANQ96GW7 911 aa13.9□□□□□ -0.18
TTC39C-206ENST00000579214 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
TTC39C-206ENST00000579214 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
TTC39C-206ENST00000579214 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
TTC39C-206ENST00000579214 MYOM2P54296 1465 aa13.88□□□□□ -0.19
TTC39C-206ENST00000579214 HSPA2P54652 639 aa13.88□□□□□ -0.19
TTC39C-206ENST00000579214 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
TTC39C-206ENST00000579214 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
TTC39C-206ENST00000579214 LMTK3Q96Q04 1460 aa13.87□□□□□ -0.19
TTC39C-206ENST00000579214 SLIT1O75093 1534 aa13.87□□□□□ -0.19
TTC39C-206ENST00000579214 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
TTC39C-206ENST00000579214 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
TTC39C-206ENST00000579214 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
TTC39C-206ENST00000579214 PRAG1Q86YV5 1406 aa13.86□□□□□ -0.19
TTC39C-206ENST00000579214 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
TTC39C-206ENST00000579214 ANKLE2Q86XL3 938 aa13.85□□□□□ -0.19
TTC39C-206ENST00000579214 LTKP29376 864 aa13.84□□□□□ -0.19
TTC39C-206ENST00000579214 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
TTC39C-206ENST00000579214 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
TTC39C-206ENST00000579214 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
TTC39C-206ENST00000579214 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
TTC39C-206ENST00000579214 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
TTC39C-206ENST00000579214 PLEKHG1Q9ULL1 1385 aa13.82□□□□□ -0.2
TTC39C-206ENST00000579214 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
TTC39C-206ENST00000579214 MSH5O43196 834 aa13.81□□□□□ -0.2
TTC39C-206ENST00000579214 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
TTC39C-206ENST00000579214 IQGAP1P46940 1657 aa13.81□□□□□ -0.2
TTC39C-206ENST00000579214 ROCK2O75116 1388 aaKnown RBP13.81□□□□□ -0.2
TTC39C-206ENST00000579214 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
TTC39C-206ENST00000579214 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
TTC39C-206ENST00000579214 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
TTC39C-206ENST00000579214 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
TTC39C-206ENST00000579214 LAMC1P11047 1609 aa13.79□□□□□ -0.2
TTC39C-206ENST00000579214 SLC26A8Q96RN1 970 aa13.78□□□□□ -0.2
TTC39C-206ENST00000579214 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
TTC39C-206ENST00000579214 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
TTC39C-206ENST00000579214 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
TTC39C-206ENST00000579214 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
TTC39C-206ENST00000579214 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
TTC39C-206ENST00000579214 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
TTC39C-206ENST00000579214 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
TTC39C-206ENST00000579214 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
TTC39C-206ENST00000579214 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
TTC39C-206ENST00000579214 STK26Q9P289 416 aa13.74□□□□□ -0.21
TTC39C-206ENST00000579214 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
TTC39C-206ENST00000579214 MED14O60244 1454 aa13.74□□□□□ -0.21
TTC39C-206ENST00000579214 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
TTC39C-206ENST00000579214 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
TTC39C-206ENST00000579214 METP08581 1390 aa13.72□□□□□ -0.21
TTC39C-206ENST00000579214 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
TTC39C-206ENST00000579214 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
TTC39C-206ENST00000579214 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.21
TTC39C-206ENST00000579214 TBX22Q9Y458 520 aa13.71□□□□□ -0.21
TTC39C-206ENST00000579214 USP47Q96K76 1375 aa13.71□□□□□ -0.22
TTC39C-206ENST00000579214 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
TTC39C-206ENST00000579214 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
TTC39C-206ENST00000579214 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
TTC39C-206ENST00000579214 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
TTC39C-206ENST00000579214 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
TTC39C-206ENST00000579214 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
TTC39C-206ENST00000579214 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
TTC39C-206ENST00000579214 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
TTC39C-206ENST00000579214 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
TTC39C-206ENST00000579214 POGKQ9P215 609 aa13.66□□□□□ -0.22
TTC39C-206ENST00000579214 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
TTC39C-206ENST00000579214 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
TTC39C-206ENST00000579214 ARHGEF28Q8N1W1 1705 aaKnown RBP13.65□□□□□ -0.22
TTC39C-206ENST00000579214 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
TTC39C-206ENST00000579214 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
TTC39C-206ENST00000579214 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
TTC39C-206ENST00000579214 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
TTC39C-206ENST00000579214 CPS1P31327 1500 aa13.64□□□□□ -0.23
TTC39C-206ENST00000579214 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
TTC39C-206ENST00000579214 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
TTC39C-206ENST00000579214 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
TTC39C-206ENST00000579214 KCNA6P17658 529 aa13.63□□□□□ -0.23
TTC39C-206ENST00000579214 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
TTC39C-206ENST00000579214 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
TTC39C-206ENST00000579214 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
TTC39C-206ENST00000579214 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
TTC39C-206ENST00000579214 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
TTC39C-206ENST00000579214 ZNF335Q9H4Z2 1342 aaPredicted RBP13.62□□□□□ -0.23
TTC39C-206ENST00000579214 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
TTC39C-206ENST00000579214 TECPR2O15040 1411 aa13.61□□□□□ -0.23
TTC39C-206ENST00000579214 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
TTC39C-206ENST00000579214 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
TTC39C-206ENST00000579214 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
TTC39C-206ENST00000579214 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
TTC39C-206ENST00000579214 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
TTC39C-206ENST00000579214 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
TTC39C-206ENST00000579214 NKTRP30414 1462 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms