RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IQGAP3Q86VI3 1631 aa14.02□□□□□ -0.16
CDK5RAP3-211ENST00000578996 RIMS2Q9UQ26 1411 aa14.02□□□□□ -0.16
CDK5RAP3-211ENST00000578996 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-211ENST00000578996 KCNA6P17658 529 aa14.01□□□□□ -0.17
CDK5RAP3-211ENST00000578996 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-211ENST00000578996 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-211ENST00000578996 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-211ENST00000578996 TMEM94Q12767 1356 aa14□□□□□ -0.17
CDK5RAP3-211ENST00000578996 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
CDK5RAP3-211ENST00000578996 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
CDK5RAP3-211ENST00000578996 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-211ENST00000578996 ZFYVE9O95405 1425 aa13.99□□□□□ -0.17
CDK5RAP3-211ENST00000578996 XIRP1Q702N8 1843 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-211ENST00000578996 PLEKHG1Q9ULL1 1385 aa13.98□□□□□ -0.17
CDK5RAP3-211ENST00000578996 SOCS7O14512 581 aa13.98□□□□□ -0.17
CDK5RAP3-211ENST00000578996 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP3-211ENST00000578996 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-211ENST00000578996 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-211ENST00000578996 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.18
CDK5RAP3-211ENST00000578996 NWD1Q149M9 1564 aa13.96□□□□□ -0.18
CDK5RAP3-211ENST00000578996 MSH6P52701 1360 aa13.95□□□□□ -0.18
CDK5RAP3-211ENST00000578996 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-211ENST00000578996 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
CDK5RAP3-211ENST00000578996 TBX22Q9Y458 520 aa13.92□□□□□ -0.18
CDK5RAP3-211ENST00000578996 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
CDK5RAP3-211ENST00000578996 NAIPQ13075 1403 aa13.91□□□□□ -0.18
CDK5RAP3-211ENST00000578996 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
CDK5RAP3-211ENST00000578996 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
CDK5RAP3-211ENST00000578996 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.18
CDK5RAP3-211ENST00000578996 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
CDK5RAP3-211ENST00000578996 ROBO1Q9Y6N7 1651 aa13.9□□□□□ -0.18
CDK5RAP3-211ENST00000578996 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-211ENST00000578996 TRPM2O94759 1503 aa13.88□□□□□ -0.19
CDK5RAP3-211ENST00000578996 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
CDK5RAP3-211ENST00000578996 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
CDK5RAP3-211ENST00000578996 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
CDK5RAP3-211ENST00000578996 HFM1A2PYH4 1435 aa13.86□□□□□ -0.19
CDK5RAP3-211ENST00000578996 PIK3R4Q99570 1358 aa13.85□□□□□ -0.19
CDK5RAP3-211ENST00000578996 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
CDK5RAP3-211ENST00000578996 ATF3P18847 181 aa13.84□□□□□ -0.19
CDK5RAP3-211ENST00000578996 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-211ENST00000578996 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
CDK5RAP3-211ENST00000578996 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
CDK5RAP3-211ENST00000578996 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
CDK5RAP3-211ENST00000578996 PHLPP1O60346 1717 aa13.82□□□□□ -0.2
CDK5RAP3-211ENST00000578996 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
CDK5RAP3-211ENST00000578996 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
CDK5RAP3-211ENST00000578996 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
CDK5RAP3-211ENST00000578996 METP08581 1390 aa13.81□□□□□ -0.2
CDK5RAP3-211ENST00000578996 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-211ENST00000578996 KIF1BO60333 1816 aa13.8□□□□□ -0.2
CDK5RAP3-211ENST00000578996 FOXD1Q16676 465 aa13.79□□□□□ -0.2
CDK5RAP3-211ENST00000578996 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-211ENST00000578996 RGS17Q9UGC6 210 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-211ENST00000578996 JCADQ9P266 1359 aa13.78□□□□□ -0.2
CDK5RAP3-211ENST00000578996 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-211ENST00000578996 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-211ENST00000578996 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
CDK5RAP3-211ENST00000578996 DCCP43146 1447 aa13.74□□□□□ -0.21
CDK5RAP3-211ENST00000578996 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-211ENST00000578996 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 AHDC1Q5TGY3 1603 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 MST1RQ04912 1400 aa13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
CDK5RAP3-211ENST00000578996 RGL3Q3MIN7 710 aa13.72□□□□□ -0.21
CDK5RAP3-211ENST00000578996 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
CDK5RAP3-211ENST00000578996 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
CDK5RAP3-211ENST00000578996 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.21
CDK5RAP3-211ENST00000578996 SPATA31A6Q5VVP1 1343 aa13.7□□□□□ -0.22
CDK5RAP3-211ENST00000578996 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-211ENST00000578996 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-211ENST00000578996 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-211ENST00000578996 PPLO60437 1756 aa13.7□□□□□ -0.22
CDK5RAP3-211ENST00000578996 LRP6O75581 1613 aa13.69□□□□□ -0.22
CDK5RAP3-211ENST00000578996 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-211ENST00000578996 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
CDK5RAP3-211ENST00000578996 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-211ENST00000578996 ROBO2Q9HCK4 1378 aa13.69□□□□□ -0.22
CDK5RAP3-211ENST00000578996 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
CDK5RAP3-211ENST00000578996 ADGRF5Q8IZF2 1346 aa13.67□□□□□ -0.22
CDK5RAP3-211ENST00000578996 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
CDK5RAP3-211ENST00000578996 STK26Q9P289 416 aa13.66□□□□□ -0.22
CDK5RAP3-211ENST00000578996 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
CDK5RAP3-211ENST00000578996 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
CDK5RAP3-211ENST00000578996 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-211ENST00000578996 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ZNF772Q68DY9 489 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
CDK5RAP3-211ENST00000578996 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
CDK5RAP3-211ENST00000578996 TMEM132EQ6IEE7 984 aa13.62□□□□□ -0.23
CDK5RAP3-211ENST00000578996 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ACIN1Q9UKV3 1341 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-211ENST00000578996 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
CDK5RAP3-211ENST00000578996 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
CDK5RAP3-211ENST00000578996 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
CDK5RAP3-211ENST00000578996 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms