RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 RIMS2Q9UQ26 1411 aa26.56■■□□□ 1.84
SLC9A3R1-203ENST00000578958 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.56■■□□□ 1.84
SLC9A3R1-203ENST00000578958 E9PCH4 1651 aa26.55■■□□□ 1.84
SLC9A3R1-203ENST00000578958 PROSER2Q86WR7 435 aaPredicted RBP26.55■■□□□ 1.84
SLC9A3R1-203ENST00000578958 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
SLC9A3R1-203ENST00000578958 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
SLC9A3R1-203ENST00000578958 TMEM131LA2VDJ0 1609 aa26.51■■□□□ 1.83
SLC9A3R1-203ENST00000578958 PLEKHG1Q9ULL1 1385 aa26.51■■□□□ 1.83
SLC9A3R1-203ENST00000578958 ZFYVE9O95405 1425 aa26.5■■□□□ 1.83
SLC9A3R1-203ENST00000578958 TMEM94Q12767 1356 aa26.5■■□□□ 1.83
SLC9A3R1-203ENST00000578958 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
SLC9A3R1-203ENST00000578958 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
SLC9A3R1-203ENST00000578958 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
SLC9A3R1-203ENST00000578958 RBM33Q96EV2 1170 aaKnown RBP26.47■■□□□ 1.83
SLC9A3R1-203ENST00000578958 TBX22Q9Y458 520 aa26.44■■□□□ 1.82
SLC9A3R1-203ENST00000578958 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
SLC9A3R1-203ENST00000578958 ZNF326Q5BKZ1 582 aaKnown RBP26.43■■□□□ 1.82
SLC9A3R1-203ENST00000578958 TRIM52Q96A61 297 aa26.43■■□□□ 1.82
SLC9A3R1-203ENST00000578958 XIRP1Q702N8 1843 aaKnown RBP26.42■■□□□ 1.82
SLC9A3R1-203ENST00000578958 MSH6P52701 1360 aa26.41■■□□□ 1.82
SLC9A3R1-203ENST00000578958 NAIPQ13075 1403 aa26.4■■□□□ 1.82
SLC9A3R1-203ENST00000578958 SOCS7O14512 581 aa26.4■■□□□ 1.82
SLC9A3R1-203ENST00000578958 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
SLC9A3R1-203ENST00000578958 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
SLC9A3R1-203ENST00000578958 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
SLC9A3R1-203ENST00000578958 MED1Q15648 1581 aaPredicted RBP26.37■■□□□ 1.81
SLC9A3R1-203ENST00000578958 SPHKAPQ2M3C7 1700 aa26.36■■□□□ 1.81
SLC9A3R1-203ENST00000578958 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
SLC9A3R1-203ENST00000578958 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
SLC9A3R1-203ENST00000578958 DIP2AQ14689 1571 aa26.33■■□□□ 1.8
SLC9A3R1-203ENST00000578958 HFM1A2PYH4 1435 aa26.32■■□□□ 1.8
SLC9A3R1-203ENST00000578958 ADAMTS13Q76LX8 1427 aa26.32■■□□□ 1.8
SLC9A3R1-203ENST00000578958 PIK3R4Q99570 1358 aa26.32■■□□□ 1.8
SLC9A3R1-203ENST00000578958 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
SLC9A3R1-203ENST00000578958 SLAIN2Q9P270 581 aa26.3■■□□□ 1.8
SLC9A3R1-203ENST00000578958 TRPM2O94759 1503 aa26.29■■□□□ 1.8
SLC9A3R1-203ENST00000578958 AMOTL2Q9Y2J4 779 aa26.28■■□□□ 1.8
SLC9A3R1-203ENST00000578958 NCOA3Q9Y6Q9 1424 aa26.26■■□□□ 1.79
SLC9A3R1-203ENST00000578958 ATF3P18847 181 aa26.25■■□□□ 1.79
SLC9A3R1-203ENST00000578958 ROBO1Q9Y6N7 1651 aa26.25■■□□□ 1.79
SLC9A3R1-203ENST00000578958 CADPS2Q86UW7 1296 aa26.23■■□□□ 1.79
SLC9A3R1-203ENST00000578958 C19orf44Q9H6X5 657 aa26.23■■□□□ 1.79
SLC9A3R1-203ENST00000578958 CLTCL1P53675 1640 aa26.23■■□□□ 1.79
SLC9A3R1-203ENST00000578958 KIF1BO60333 1816 aa26.2■■□□□ 1.78
SLC9A3R1-203ENST00000578958 SETBP1Q9Y6X0 1596 aa26.19■■□□□ 1.78
SLC9A3R1-203ENST00000578958 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
SLC9A3R1-203ENST00000578958 PTPRUQ92729 1446 aa26.17■■□□□ 1.78
SLC9A3R1-203ENST00000578958 NEXMIFQ5QGS0 1516 aa26.15■■□□□ 1.78
SLC9A3R1-203ENST00000578958 METP08581 1390 aa26.14■■□□□ 1.78
SLC9A3R1-203ENST00000578958 NRXN3Q9Y4C0 1643 aa26.14■■□□□ 1.77
SLC9A3R1-203ENST00000578958 FOXD1Q16676 465 aa26.13■■□□□ 1.77
SLC9A3R1-203ENST00000578958 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
SLC9A3R1-203ENST00000578958 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.12■■□□□ 1.77
SLC9A3R1-203ENST00000578958 PHLPP1O60346 1717 aa26.11■■□□□ 1.77
SLC9A3R1-203ENST00000578958 JCADQ9P266 1359 aa26.08■■□□□ 1.77
SLC9A3R1-203ENST00000578958 MPHOSPH9Q99550 1183 aa26.08■■□□□ 1.77
SLC9A3R1-203ENST00000578958 ACIN1Q9UKV3 1341 aaKnown RBP26.08■■□□□ 1.77
SLC9A3R1-203ENST00000578958 XRN1Q8IZH2 1706 aaKnown RBP26.07■■□□□ 1.76
SLC9A3R1-203ENST00000578958 CCDC144AA2RUR9 1427 aa26.06■■□□□ 1.76
SLC9A3R1-203ENST00000578958 DCCP43146 1447 aa26.05■■□□□ 1.76
SLC9A3R1-203ENST00000578958 RGL3Q3MIN7 710 aa26.03■■□□□ 1.76
SLC9A3R1-203ENST00000578958 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
SLC9A3R1-203ENST00000578958 RGS17Q9UGC6 210 aaPredicted RBP26.01■■□□□ 1.75
SLC9A3R1-203ENST00000578958 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
SLC9A3R1-203ENST00000578958 MEX3CQ5U5Q3 659 aaKnown RBP25.99■■□□□ 1.75
SLC9A3R1-203ENST00000578958 ADGRL3Q9HAR2 1447 aa25.98■■□□□ 1.75
SLC9A3R1-203ENST00000578958 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
SLC9A3R1-203ENST00000578958 SPATA31A6Q5VVP1 1343 aa25.97■■□□□ 1.75
SLC9A3R1-203ENST00000578958 AHDC1Q5TGY3 1603 aaPredicted RBP25.96■■□□□ 1.75
SLC9A3R1-203ENST00000578958 PPLO60437 1756 aa25.96■■□□□ 1.75
SLC9A3R1-203ENST00000578958 MST1RQ04912 1400 aa25.96■■□□□ 1.75
SLC9A3R1-203ENST00000578958 PTCH1Q13635 1447 aa25.94■■□□□ 1.74
SLC9A3R1-203ENST00000578958 ANKRD30BQ9BXX2 1392 aa25.93■■□□□ 1.74
SLC9A3R1-203ENST00000578958 ROBO2Q9HCK4 1378 aa25.93■■□□□ 1.74
SLC9A3R1-203ENST00000578958 ASXL1Q8IXJ9 1541 aa25.93■■□□□ 1.74
SLC9A3R1-203ENST00000578958 ADGRF5Q8IZF2 1346 aa25.92■■□□□ 1.74
SLC9A3R1-203ENST00000578958 POTEAQ6S8J7 498 aa25.91■■□□□ 1.74
SLC9A3R1-203ENST00000578958 SPATA31E1Q6ZUB1 1445 aa25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 NALCNQ8IZF0 1738 aa25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 NUTM2BA6NNL0 878 aaPredicted RBP25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 NUTM2EB1AL46 878 aaPredicted RBP25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 NUTM2AQ8IVF1 878 aaPredicted RBP25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 LRRC59Q96AG4 307 aaKnown RBP25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 STK26Q9P289 416 aa25.89■■□□□ 1.74
SLC9A3R1-203ENST00000578958 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
SLC9A3R1-203ENST00000578958 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
SLC9A3R1-203ENST00000578958 SHPRHQ149N8 1683 aa25.85■■□□□ 1.73
SLC9A3R1-203ENST00000578958 DDX17Q92841 729 aaKnown RBP25.85■■□□□ 1.73
SLC9A3R1-203ENST00000578958 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
SLC9A3R1-203ENST00000578958 ZNF772Q68DY9 489 aaPredicted RBP25.84■■□□□ 1.73
SLC9A3R1-203ENST00000578958 PRAG1Q86YV5 1406 aa25.83■■□□□ 1.73
SLC9A3R1-203ENST00000578958 LRP6O75581 1613 aa25.82■■□□□ 1.72
SLC9A3R1-203ENST00000578958 TMEM132EQ6IEE7 984 aa25.82■■□□□ 1.72
SLC9A3R1-203ENST00000578958 NHSL1Q5SYE7 1610 aa25.81■■□□□ 1.72
SLC9A3R1-203ENST00000578958 ORAI2Q96SN7 254 aa25.81■■□□□ 1.72
SLC9A3R1-203ENST00000578958 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
SLC9A3R1-203ENST00000578958 IFT172Q9UG01 1749 aa25.78■■□□□ 1.72
SLC9A3R1-203ENST00000578958 WAPLQ7Z5K2 1190 aa25.78■■□□□ 1.72
SLC9A3R1-203ENST00000578958 PIK3C2GO75747 1445 aa25.78■■□□□ 1.72
SLC9A3R1-203ENST00000578958 ESCO1Q5FWF5 840 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms