RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPRM-210ENST00000578916 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 SPATA31A6Q5VVP1 1343 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 ANKRD30AQ9BXX3 1397 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 NOS1P29475 1434 aa14.32□□□□□ -0.12
PTPRM-210ENST00000578916 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
PTPRM-210ENST00000578916 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
PTPRM-210ENST00000578916 DAPK1P53355 1430 aa14.31□□□□□ -0.12
PTPRM-210ENST00000578916 PLEKHG1Q9ULL1 1385 aa14.29□□□□□ -0.12
PTPRM-210ENST00000578916 CROCC2H7BZ55 1655 aa14.28□□□□□ -0.12
PTPRM-210ENST00000578916 APLP2Q06481 763 aa14.28□□□□□ -0.12
PTPRM-210ENST00000578916 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
PTPRM-210ENST00000578916 PTPN23Q9H3S7 1636 aa14.28□□□□□ -0.12
PTPRM-210ENST00000578916 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.12
PTPRM-210ENST00000578916 NCOA3Q9Y6Q9 1424 aa14.27□□□□□ -0.12
PTPRM-210ENST00000578916 ATF3P18847 181 aa14.27□□□□□ -0.13
PTPRM-210ENST00000578916 CADPS2Q86UW7 1296 aa14.27□□□□□ -0.13
PTPRM-210ENST00000578916 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
PTPRM-210ENST00000578916 LRP6O75581 1613 aa14.26□□□□□ -0.13
PTPRM-210ENST00000578916 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
PTPRM-210ENST00000578916 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
PTPRM-210ENST00000578916 RXRBP28702 533 aa14.26□□□□□ -0.13
PTPRM-210ENST00000578916 ZFYVE9O95405 1425 aa14.25□□□□□ -0.13
PTPRM-210ENST00000578916 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
PTPRM-210ENST00000578916 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPRM-210ENST00000578916 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
PTPRM-210ENST00000578916 NUTM2BA6NNL0 878 aaPredicted RBP14.23□□□□□ -0.13
PTPRM-210ENST00000578916 NUTM2EB1AL46 878 aaPredicted RBP14.23□□□□□ -0.13
PTPRM-210ENST00000578916 NUTM2AQ8IVF1 878 aaPredicted RBP14.23□□□□□ -0.13
PTPRM-210ENST00000578916 RPRD2Q5VT52 1461 aaKnown RBP14.23□□□□□ -0.13
PTPRM-210ENST00000578916 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
PTPRM-210ENST00000578916 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
PTPRM-210ENST00000578916 AHDC1Q5TGY3 1603 aaPredicted RBP14.21□□□□□ -0.13
PTPRM-210ENST00000578916 PIK3R4Q99570 1358 aa14.2□□□□□ -0.14
PTPRM-210ENST00000578916 ADAMTS13Q76LX8 1427 aa14.19□□□□□ -0.14
PTPRM-210ENST00000578916 ANKRD50Q9ULJ7 1429 aa14.19□□□□□ -0.14
PTPRM-210ENST00000578916 BRINP3Q76B58 766 aa14.19□□□□□ -0.14
PTPRM-210ENST00000578916 AFF2P51816 1311 aa14.18□□□□□ -0.14
PTPRM-210ENST00000578916 SHPRHQ149N8 1683 aa14.18□□□□□ -0.14
PTPRM-210ENST00000578916 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
PTPRM-210ENST00000578916 TMEM131LA2VDJ0 1609 aa14.18□□□□□ -0.14
PTPRM-210ENST00000578916 ADGRL2O95490 1459 aa14.18□□□□□ -0.14
PTPRM-210ENST00000578916 CDK12Q9NYV4 1490 aaPredicted RBP14.18□□□□□ -0.14
PTPRM-210ENST00000578916 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
PTPRM-210ENST00000578916 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.17□□□□□ -0.14
PTPRM-210ENST00000578916 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
PTPRM-210ENST00000578916 DIP2AQ14689 1571 aa14.15□□□□□ -0.14
PTPRM-210ENST00000578916 MYO5BQ9ULV0 1848 aa14.14□□□□□ -0.15
PTPRM-210ENST00000578916 RBM6P78332 1123 aaKnown RBP14.14□□□□□ -0.15
PTPRM-210ENST00000578916 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
PTPRM-210ENST00000578916 C8orf37Q96NL8 207 aa14.14□□□□□ -0.15
PTPRM-210ENST00000578916 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
PTPRM-210ENST00000578916 TRPM2O94759 1503 aa14.13□□□□□ -0.15
PTPRM-210ENST00000578916 DCCP43146 1447 aa14.13□□□□□ -0.15
PTPRM-210ENST00000578916 PTPRUQ92729 1446 aa14.13□□□□□ -0.15
PTPRM-210ENST00000578916 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
PTPRM-210ENST00000578916 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
PTPRM-210ENST00000578916 RGS12O14924 1447 aa14.1□□□□□ -0.15
PTPRM-210ENST00000578916 MST1RQ04912 1400 aa14.09□□□□□ -0.15
PTPRM-210ENST00000578916 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
PTPRM-210ENST00000578916 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
PTPRM-210ENST00000578916 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
PTPRM-210ENST00000578916 ADAMTS2O95450 1211 aa14.07□□□□□ -0.16
PTPRM-210ENST00000578916 FOXD1Q16676 465 aa14.07□□□□□ -0.16
PTPRM-210ENST00000578916 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
PTPRM-210ENST00000578916 UNC13BO14795 1591 aa14.06□□□□□ -0.16
PTPRM-210ENST00000578916 E9PCH4 1651 aa14.06□□□□□ -0.16
PTPRM-210ENST00000578916 ATAD2Q6PL18 1390 aa14.06□□□□□ -0.16
PTPRM-210ENST00000578916 SRCAPQ6ZRS2 3230 aa14.05□□□□□ -0.16
PTPRM-210ENST00000578916 NUP155O75694 1391 aa14.05□□□□□ -0.16
PTPRM-210ENST00000578916 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
PTPRM-210ENST00000578916 METP08581 1390 aa14.04□□□□□ -0.16
PTPRM-210ENST00000578916 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
PTPRM-210ENST00000578916 USP21Q9UK80 565 aa14.03□□□□□ -0.16
PTPRM-210ENST00000578916 ADGRL3Q9HAR2 1447 aa14.03□□□□□ -0.16
PTPRM-210ENST00000578916 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
PTPRM-210ENST00000578916 SETBP1Q9Y6X0 1596 aa14.02□□□□□ -0.16
PTPRM-210ENST00000578916 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.17
PTPRM-210ENST00000578916 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
PTPRM-210ENST00000578916 IQGAP3Q86VI3 1631 aa14.01□□□□□ -0.17
PTPRM-210ENST00000578916 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
PTPRM-210ENST00000578916 NRXN3Q9Y4C0 1643 aa14□□□□□ -0.17
PTPRM-210ENST00000578916 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
PTPRM-210ENST00000578916 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
PTPRM-210ENST00000578916 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
PTPRM-210ENST00000578916 ITGAEP38570 1179 aa13.97□□□□□ -0.17
PTPRM-210ENST00000578916 PTCH1Q13635 1447 aa13.97□□□□□ -0.17
PTPRM-210ENST00000578916 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
PTPRM-210ENST00000578916 ATRNO75882 1429 aa13.95□□□□□ -0.18
PTPRM-210ENST00000578916 NALCNQ8IZF0 1738 aa13.94□□□□□ -0.18
PTPRM-210ENST00000578916 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
PTPRM-210ENST00000578916 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
PTPRM-210ENST00000578916 LAMC1P11047 1609 aa13.91□□□□□ -0.18
PTPRM-210ENST00000578916 SPHKAPQ2M3C7 1700 aa13.91□□□□□ -0.18
PTPRM-210ENST00000578916 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
PTPRM-210ENST00000578916 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
PTPRM-210ENST00000578916 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
PTPRM-210ENST00000578916 GJD4Q96KN9 370 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms