RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
RTTN-202ENST00000578780 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
RTTN-202ENST00000578780 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
RTTN-202ENST00000578780 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
RTTN-202ENST00000578780 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
RTTN-202ENST00000578780 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
RTTN-202ENST00000578780 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
RTTN-202ENST00000578780 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
RTTN-202ENST00000578780 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
RTTN-202ENST00000578780 KIF1BO60333 1816 aa13.61□□□□□ -0.23
RTTN-202ENST00000578780 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
RTTN-202ENST00000578780 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
RTTN-202ENST00000578780 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
RTTN-202ENST00000578780 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
RTTN-202ENST00000578780 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
RTTN-202ENST00000578780 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
RTTN-202ENST00000578780 NOS1P29475 1434 aa13.6□□□□□ -0.23
RTTN-202ENST00000578780 AGLP35573 1532 aa13.59□□□□□ -0.23
RTTN-202ENST00000578780 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
RTTN-202ENST00000578780 LAMC1P11047 1609 aa13.59□□□□□ -0.23
RTTN-202ENST00000578780 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
RTTN-202ENST00000578780 SIGLEC1Q9BZZ2 1709 aa13.58□□□□□ -0.24
RTTN-202ENST00000578780 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
RTTN-202ENST00000578780 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
RTTN-202ENST00000578780 MYOM2P54296 1465 aa13.57□□□□□ -0.24
RTTN-202ENST00000578780 ARHGEF40Q8TER5 1519 aa13.57□□□□□ -0.24
RTTN-202ENST00000578780 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
RTTN-202ENST00000578780 MLECQ14165 292 aa13.56□□□□□ -0.24
RTTN-202ENST00000578780 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
RTTN-202ENST00000578780 SYNMO15061 1565 aa13.56□□□□□ -0.24
RTTN-202ENST00000578780 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
RTTN-202ENST00000578780 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
RTTN-202ENST00000578780 IDI1Q13907 227 aa13.54□□□□□ -0.24
RTTN-202ENST00000578780 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
RTTN-202ENST00000578780 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
RTTN-202ENST00000578780 PIK3C2BO00750 1634 aa13.54□□□□□ -0.24
RTTN-202ENST00000578780 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
RTTN-202ENST00000578780 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
RTTN-202ENST00000578780 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
RTTN-202ENST00000578780 TESK2Q96S53 571 aa13.53□□□□□ -0.24
RTTN-202ENST00000578780 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
RTTN-202ENST00000578780 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.25
RTTN-202ENST00000578780 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
RTTN-202ENST00000578780 KIAA1210Q9ULL0 1709 aa13.51□□□□□ -0.25
RTTN-202ENST00000578780 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
RTTN-202ENST00000578780 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
RTTN-202ENST00000578780 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
RTTN-202ENST00000578780 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
RTTN-202ENST00000578780 TMF1P82094 1093 aa13.5□□□□□ -0.25
RTTN-202ENST00000578780 PPLO60437 1756 aa13.49□□□□□ -0.25
RTTN-202ENST00000578780 ERVK-7P63135 1459 aa13.49□□□□□ -0.25
RTTN-202ENST00000578780 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
RTTN-202ENST00000578780 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
RTTN-202ENST00000578780 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
RTTN-202ENST00000578780 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
RTTN-202ENST00000578780 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
RTTN-202ENST00000578780 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
RTTN-202ENST00000578780 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
RTTN-202ENST00000578780 NEXMIFQ5QGS0 1516 aa13.46□□□□□ -0.25
RTTN-202ENST00000578780 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.26
RTTN-202ENST00000578780 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
RTTN-202ENST00000578780 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
RTTN-202ENST00000578780 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
RTTN-202ENST00000578780 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
RTTN-202ENST00000578780 ZMYM3Q14202 1370 aa13.44□□□□□ -0.26
RTTN-202ENST00000578780 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
RTTN-202ENST00000578780 SPATA31D1Q6ZQQ2 1576 aa13.43□□□□□ -0.26
RTTN-202ENST00000578780 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
RTTN-202ENST00000578780 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
RTTN-202ENST00000578780 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
RTTN-202ENST00000578780 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
RTTN-202ENST00000578780 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
RTTN-202ENST00000578780 ZFYVE9O95405 1425 aa13.42□□□□□ -0.26
RTTN-202ENST00000578780 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
RTTN-202ENST00000578780 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
RTTN-202ENST00000578780 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
RTTN-202ENST00000578780 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
RTTN-202ENST00000578780 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
RTTN-202ENST00000578780 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
RTTN-202ENST00000578780 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
RTTN-202ENST00000578780 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
RTTN-202ENST00000578780 PANK3Q9H999 370 aa13.39□□□□□ -0.27
RTTN-202ENST00000578780 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
RTTN-202ENST00000578780 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
RTTN-202ENST00000578780 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
RTTN-202ENST00000578780 A2ML1A8K2U0 1454 aa13.38□□□□□ -0.27
RTTN-202ENST00000578780 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
RTTN-202ENST00000578780 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
RTTN-202ENST00000578780 RALBP1Q15311 655 aa13.36□□□□□ -0.27
RTTN-202ENST00000578780 TNRQ92752 1358 aa13.36□□□□□ -0.27
RTTN-202ENST00000578780 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
RTTN-202ENST00000578780 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
RTTN-202ENST00000578780 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
RTTN-202ENST00000578780 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
RTTN-202ENST00000578780 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
RTTN-202ENST00000578780 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
RTTN-202ENST00000578780 STK26Q9P289 416 aa13.33□□□□□ -0.28
RTTN-202ENST00000578780 USP35Q9P2H5 1018 aa13.33□□□□□ -0.28
RTTN-202ENST00000578780 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
RTTN-202ENST00000578780 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms