RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 KDM5AP29375 1690 aaKnown RBP21.48■■□□□ 1.03
HS3ST3A1-202ENST00000578576 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
HS3ST3A1-202ENST00000578576 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
HS3ST3A1-202ENST00000578576 BCANQ96GW7 911 aa21.46■■□□□ 1.03
HS3ST3A1-202ENST00000578576 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
HS3ST3A1-202ENST00000578576 LRRC7Q96NW7 1537 aa21.44■■□□□ 1.02
HS3ST3A1-202ENST00000578576 TMEM131LA2VDJ0 1609 aa21.43■■□□□ 1.02
HS3ST3A1-202ENST00000578576 NAIPQ13075 1403 aa21.42■■□□□ 1.02
HS3ST3A1-202ENST00000578576 RIMS2Q9UQ26 1411 aa21.4■■□□□ 1.02
HS3ST3A1-202ENST00000578576 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
HS3ST3A1-202ENST00000578576 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
HS3ST3A1-202ENST00000578576 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
HS3ST3A1-202ENST00000578576 RGS17Q9UGC6 210 aaPredicted RBP21.38■■□□□ 1.01
HS3ST3A1-202ENST00000578576 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
HS3ST3A1-202ENST00000578576 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
HS3ST3A1-202ENST00000578576 KCNA6P17658 529 aa21.35■■□□□ 1.01
HS3ST3A1-202ENST00000578576 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
HS3ST3A1-202ENST00000578576 PROSER2Q86WR7 435 aaPredicted RBP21.34■■□□□ 1.01
HS3ST3A1-202ENST00000578576 SPHKAPQ2M3C7 1700 aa21.33■■□□□ 1.01
HS3ST3A1-202ENST00000578576 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
HS3ST3A1-202ENST00000578576 HFM1A2PYH4 1435 aa21.3■■□□□ 1
HS3ST3A1-202ENST00000578576 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
HS3ST3A1-202ENST00000578576 TMEM94Q12767 1356 aa21.29■■□□□ 1
HS3ST3A1-202ENST00000578576 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
HS3ST3A1-202ENST00000578576 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
HS3ST3A1-202ENST00000578576 TBX22Q9Y458 520 aa21.27■■□□□ 1
HS3ST3A1-202ENST00000578576 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
HS3ST3A1-202ENST00000578576 CLTCL1P53675 1640 aa21.26■□□□□ 0.99
HS3ST3A1-202ENST00000578576 FOXD1Q16676 465 aa21.25■□□□□ 0.99
HS3ST3A1-202ENST00000578576 ADAMTS13Q76LX8 1427 aa21.25■□□□□ 0.99
HS3ST3A1-202ENST00000578576 POTEAQ6S8J7 498 aa21.22■□□□□ 0.99
HS3ST3A1-202ENST00000578576 NWD1Q149M9 1564 aa21.22■□□□□ 0.99
HS3ST3A1-202ENST00000578576 SETD1AO15047 1707 aaKnown RBP21.21■□□□□ 0.99
HS3ST3A1-202ENST00000578576 KIF1BO60333 1816 aa21.2■□□□□ 0.98
HS3ST3A1-202ENST00000578576 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
HS3ST3A1-202ENST00000578576 TRPM2O94759 1503 aa21.19■□□□□ 0.98
HS3ST3A1-202ENST00000578576 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
HS3ST3A1-202ENST00000578576 SRCAPQ6ZRS2 3230 aa21.18■□□□□ 0.98
HS3ST3A1-202ENST00000578576 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
HS3ST3A1-202ENST00000578576 PTPRUQ92729 1446 aa21.16■□□□□ 0.98
HS3ST3A1-202ENST00000578576 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
HS3ST3A1-202ENST00000578576 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
HS3ST3A1-202ENST00000578576 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
HS3ST3A1-202ENST00000578576 MSH6P52701 1360 aa21.14■□□□□ 0.98
HS3ST3A1-202ENST00000578576 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
HS3ST3A1-202ENST00000578576 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
HS3ST3A1-202ENST00000578576 NEXMIFQ5QGS0 1516 aa21.14■□□□□ 0.97
HS3ST3A1-202ENST00000578576 METP08581 1390 aa21.11■□□□□ 0.97
HS3ST3A1-202ENST00000578576 SLAIN2Q9P270 581 aa21.11■□□□□ 0.97
HS3ST3A1-202ENST00000578576 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
HS3ST3A1-202ENST00000578576 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
HS3ST3A1-202ENST00000578576 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
HS3ST3A1-202ENST00000578576 RGL3Q3MIN7 710 aa21.08■□□□□ 0.97
HS3ST3A1-202ENST00000578576 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.07■□□□□ 0.96
HS3ST3A1-202ENST00000578576 VGFO15240 615 aaPredicted RBP21.06■□□□□ 0.96
HS3ST3A1-202ENST00000578576 C19orf44Q9H6X5 657 aa21.06■□□□□ 0.96
HS3ST3A1-202ENST00000578576 ATF3P18847 181 aa21.04■□□□□ 0.96
HS3ST3A1-202ENST00000578576 PPLO60437 1756 aa21.04■□□□□ 0.96
HS3ST3A1-202ENST00000578576 XRN1Q8IZH2 1706 aaKnown RBP21.04■□□□□ 0.96
HS3ST3A1-202ENST00000578576 NCOA3Q9Y6Q9 1424 aa21.03■□□□□ 0.96
HS3ST3A1-202ENST00000578576 RPGRIP1LQ68CZ1 1315 aa21.03■□□□□ 0.96
HS3ST3A1-202ENST00000578576 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
HS3ST3A1-202ENST00000578576 PHLPP1O60346 1717 aa21.02■□□□□ 0.96
HS3ST3A1-202ENST00000578576 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
HS3ST3A1-202ENST00000578576 CADPS2Q86UW7 1296 aa21.01■□□□□ 0.95
HS3ST3A1-202ENST00000578576 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
HS3ST3A1-202ENST00000578576 JCADQ9P266 1359 aa20.97■□□□□ 0.95
HS3ST3A1-202ENST00000578576 COL16A1Q07092 1604 aaPredicted RBP20.97■□□□□ 0.95
HS3ST3A1-202ENST00000578576 SPATA31E1Q6ZUB1 1445 aa20.96■□□□□ 0.95
HS3ST3A1-202ENST00000578576 LRP6O75581 1613 aa20.94■□□□□ 0.94
HS3ST3A1-202ENST00000578576 BRINP3Q76B58 766 aa20.93■□□□□ 0.94
HS3ST3A1-202ENST00000578576 UPF1Q92900 1129 aaKnown RBP eCLIP20.93■□□□□ 0.94
HS3ST3A1-202ENST00000578576 ROBO2Q9HCK4 1378 aa20.93■□□□□ 0.94
HS3ST3A1-202ENST00000578576 STK26Q9P289 416 aa20.92■□□□□ 0.94
HS3ST3A1-202ENST00000578576 NALCNQ8IZF0 1738 aa20.92■□□□□ 0.94
HS3ST3A1-202ENST00000578576 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
HS3ST3A1-202ENST00000578576 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
HS3ST3A1-202ENST00000578576 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
HS3ST3A1-202ENST00000578576 MST1RQ04912 1400 aa20.89■□□□□ 0.94
HS3ST3A1-202ENST00000578576 ADGRL3Q9HAR2 1447 aa20.89■□□□□ 0.94
HS3ST3A1-202ENST00000578576 DDX17Q92841 729 aaKnown RBP20.89■□□□□ 0.93
HS3ST3A1-202ENST00000578576 DCCP43146 1447 aa20.87■□□□□ 0.93
HS3ST3A1-202ENST00000578576 ANKRD30BQ9BXX2 1392 aa20.87■□□□□ 0.93
HS3ST3A1-202ENST00000578576 SHPRHQ149N8 1683 aa20.87■□□□□ 0.93
HS3ST3A1-202ENST00000578576 WAPLQ7Z5K2 1190 aa20.86■□□□□ 0.93
HS3ST3A1-202ENST00000578576 PTCH1Q13635 1447 aa20.85■□□□□ 0.93
HS3ST3A1-202ENST00000578576 AHDC1Q5TGY3 1603 aaPredicted RBP20.85■□□□□ 0.93
HS3ST3A1-202ENST00000578576 SPATA31A6Q5VVP1 1343 aa20.84■□□□□ 0.93
HS3ST3A1-202ENST00000578576 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
HS3ST3A1-202ENST00000578576 CFAP70Q5T0N1 1121 aa20.83■□□□□ 0.93
HS3ST3A1-202ENST00000578576 ZNF772Q68DY9 489 aaPredicted RBP20.83■□□□□ 0.93
HS3ST3A1-202ENST00000578576 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
HS3ST3A1-202ENST00000578576 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
HS3ST3A1-202ENST00000578576 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
HS3ST3A1-202ENST00000578576 KDM2AQ9Y2K7 1162 aa20.81■□□□□ 0.92
HS3ST3A1-202ENST00000578576 C1orf167Q5SNV9 1468 aa20.81■□□□□ 0.92
HS3ST3A1-202ENST00000578576 NUTM2BA6NNL0 878 aaPredicted RBP20.8■□□□□ 0.92
HS3ST3A1-202ENST00000578576 NUTM2EB1AL46 878 aaPredicted RBP20.8■□□□□ 0.92
HS3ST3A1-202ENST00000578576 HRCP23327 699 aa20.8■□□□□ 0.92
HS3ST3A1-202ENST00000578576 NUTM2AQ8IVF1 878 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms