RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 E9PCH4 1651 aa22.23■■□□□ 1.15
ITGB4-204ENST00000578318 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
ITGB4-204ENST00000578318 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
ITGB4-204ENST00000578318 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
ITGB4-204ENST00000578318 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
ITGB4-204ENST00000578318 BCANQ96GW7 911 aa22.21■■□□□ 1.15
ITGB4-204ENST00000578318 PLEKHG1Q9ULL1 1385 aa22.21■■□□□ 1.15
ITGB4-204ENST00000578318 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
ITGB4-204ENST00000578318 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
ITGB4-204ENST00000578318 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
ITGB4-204ENST00000578318 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
ITGB4-204ENST00000578318 FAM135BQ49AJ0 1406 aa22.19■■□□□ 1.14
ITGB4-204ENST00000578318 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
ITGB4-204ENST00000578318 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
ITGB4-204ENST00000578318 NUP155O75694 1391 aa22.14■■□□□ 1.14
ITGB4-204ENST00000578318 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
ITGB4-204ENST00000578318 ITGAEP38570 1179 aa22.14■■□□□ 1.13
ITGB4-204ENST00000578318 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
ITGB4-204ENST00000578318 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
ITGB4-204ENST00000578318 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
ITGB4-204ENST00000578318 MSH6P52701 1360 aa22.12■■□□□ 1.13
ITGB4-204ENST00000578318 TBX22Q9Y458 520 aa22.11■■□□□ 1.13
ITGB4-204ENST00000578318 DIP2AQ14689 1571 aa22.11■■□□□ 1.13
ITGB4-204ENST00000578318 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
ITGB4-204ENST00000578318 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
ITGB4-204ENST00000578318 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
ITGB4-204ENST00000578318 NUTM2DQ5VT03 806 aaPredicted RBP22.06■■□□□ 1.12
ITGB4-204ENST00000578318 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
ITGB4-204ENST00000578318 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
ITGB4-204ENST00000578318 TRPM2O94759 1503 aa22.03■■□□□ 1.12
ITGB4-204ENST00000578318 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
ITGB4-204ENST00000578318 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
ITGB4-204ENST00000578318 PHLPP1O60346 1717 aa22.01■■□□□ 1.11
ITGB4-204ENST00000578318 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
ITGB4-204ENST00000578318 RGS17Q9UGC6 210 aaPredicted RBP21.98■■□□□ 1.11
ITGB4-204ENST00000578318 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
ITGB4-204ENST00000578318 SETBP1Q9Y6X0 1596 aa21.97■■□□□ 1.11
ITGB4-204ENST00000578318 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
ITGB4-204ENST00000578318 C19orf44Q9H6X5 657 aa21.95■■□□□ 1.1
ITGB4-204ENST00000578318 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
ITGB4-204ENST00000578318 NAIPQ13075 1403 aa21.95■■□□□ 1.1
ITGB4-204ENST00000578318 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
ITGB4-204ENST00000578318 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
ITGB4-204ENST00000578318 JCADQ9P266 1359 aa21.94■■□□□ 1.1
ITGB4-204ENST00000578318 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
ITGB4-204ENST00000578318 COL16A1Q07092 1604 aaPredicted RBP21.94■■□□□ 1.1
ITGB4-204ENST00000578318 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
ITGB4-204ENST00000578318 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
ITGB4-204ENST00000578318 ATF3P18847 181 aa21.92■■□□□ 1.1
ITGB4-204ENST00000578318 KIF1BO60333 1816 aa21.92■■□□□ 1.1
ITGB4-204ENST00000578318 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
ITGB4-204ENST00000578318 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
ITGB4-204ENST00000578318 DCCP43146 1447 aa21.89■■□□□ 1.09
ITGB4-204ENST00000578318 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
ITGB4-204ENST00000578318 POTEAQ6S8J7 498 aa21.85■■□□□ 1.09
ITGB4-204ENST00000578318 METP08581 1390 aa21.85■■□□□ 1.09
ITGB4-204ENST00000578318 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
ITGB4-204ENST00000578318 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
ITGB4-204ENST00000578318 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
ITGB4-204ENST00000578318 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
ITGB4-204ENST00000578318 LRP6O75581 1613 aa21.8■■□□□ 1.08
ITGB4-204ENST00000578318 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
ITGB4-204ENST00000578318 MST1RQ04912 1400 aa21.8■■□□□ 1.08
ITGB4-204ENST00000578318 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
ITGB4-204ENST00000578318 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
ITGB4-204ENST00000578318 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
ITGB4-204ENST00000578318 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
ITGB4-204ENST00000578318 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
ITGB4-204ENST00000578318 VGFO15240 615 aaPredicted RBP21.77■■□□□ 1.08
ITGB4-204ENST00000578318 MEX3CQ5U5Q3 659 aaKnown RBP21.75■■□□□ 1.07
ITGB4-204ENST00000578318 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
ITGB4-204ENST00000578318 PPLO60437 1756 aa21.74■■□□□ 1.07
ITGB4-204ENST00000578318 PTCH1Q13635 1447 aa21.74■■□□□ 1.07
ITGB4-204ENST00000578318 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
ITGB4-204ENST00000578318 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
ITGB4-204ENST00000578318 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
ITGB4-204ENST00000578318 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
ITGB4-204ENST00000578318 LRRC59Q96AG4 307 aaKnown RBP21.67■■□□□ 1.06
ITGB4-204ENST00000578318 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
ITGB4-204ENST00000578318 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-204ENST00000578318 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-204ENST00000578318 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-204ENST00000578318 CCDC144AA2RUR9 1427 aa21.65■■□□□ 1.06
ITGB4-204ENST00000578318 LAMC1P11047 1609 aa21.65■■□□□ 1.06
ITGB4-204ENST00000578318 FOXD1Q16676 465 aa21.64■■□□□ 1.05
ITGB4-204ENST00000578318 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
ITGB4-204ENST00000578318 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
ITGB4-204ENST00000578318 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
ITGB4-204ENST00000578318 SPATA31E1Q6ZUB1 1445 aa21.61■■□□□ 1.05
ITGB4-204ENST00000578318 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
ITGB4-204ENST00000578318 AFF2P51816 1311 aa21.58■■□□□ 1.05
ITGB4-204ENST00000578318 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
ITGB4-204ENST00000578318 RXRBP28702 533 aa21.58■■□□□ 1.05
ITGB4-204ENST00000578318 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
ITGB4-204ENST00000578318 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
ITGB4-204ENST00000578318 RGL3Q3MIN7 710 aa21.57■■□□□ 1.04
ITGB4-204ENST00000578318 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
ITGB4-204ENST00000578318 CDK12Q9NYV4 1490 aaPredicted RBP21.57■■□□□ 1.04
ITGB4-204ENST00000578318 SOS2Q07890 1332 aaPredicted RBP21.56■■□□□ 1.04
ITGB4-204ENST00000578318 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms