RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 HDGFP51858 240 aaKnown RBP4.89□□□□□ -1.63
PTP4A1-204ENST00000578299 NLRP7Q8WX94 980 aa4.89□□□□□ -1.63
PTP4A1-204ENST00000578299 SULF1Q8IWU6 871 aa4.88□□□□□ -1.63
PTP4A1-204ENST00000578299 ZFRQ96KR1 1074 aaKnown RBP4.88□□□□□ -1.63
PTP4A1-204ENST00000578299 REPIN1Q9BWE0 567 aaKnown RBP4.88□□□□□ -1.63
PTP4A1-204ENST00000578299 PCDH10Q9P2E7 1040 aa4.88□□□□□ -1.63
PTP4A1-204ENST00000578299 GOLGA8CPA6NN73 597 aa4.87□□□□□ -1.63
PTP4A1-204ENST00000578299 SWT1Q5T5J6 900 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-204ENST00000578299 FAM217BQ9NTX9 383 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1-204ENST00000578299 SSTR3P32745 418 aaPredicted RBP4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 RSPH4AQ5TD94 716 aa4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 SAMD7Q7Z3H4 446 aa4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 SLF2Q8IX21 1173 aa4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 DDRGK1Q96HY6 314 aa4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 LRCH3Q96II8 777 aa4.86□□□□□ -1.63
PTP4A1-204ENST00000578299 DDX11L8A8MPP1 907 aa4.85□□□□□ -1.63
PTP4A1-204ENST00000578299 MS4A1P11836 297 aa4.85□□□□□ -1.63
PTP4A1-204ENST00000578299 ANKK1Q8NFD2 765 aa4.85□□□□□ -1.63
PTP4A1-204ENST00000578299 NECTIN2Q92692 538 aa4.85□□□□□ -1.63
PTP4A1-204ENST00000578299 FAM117AQ9C073 453 aa4.85□□□□□ -1.63
PTP4A1-204ENST00000578299 CD46P15529 392 aa4.84□□□□□ -1.63
PTP4A1-204ENST00000578299 TMEM132AQ24JP5 1023 aa4.84□□□□□ -1.63
PTP4A1-204ENST00000578299 RDH13Q8NBN7 331 aa4.84□□□□□ -1.63
PTP4A1-204ENST00000578299 WNT2BQ93097 391 aa4.84□□□□□ -1.63
PTP4A1-204ENST00000578299 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1-204ENST00000578299 SOWAHBA6NEL2 793 aa4.83□□□□□ -1.64
PTP4A1-204ENST00000578299 RNF40O75150 1001 aa4.83□□□□□ -1.64
PTP4A1-204ENST00000578299 IL27Q8NEV9 243 aa4.83□□□□□ -1.64
PTP4A1-204ENST00000578299 BEGAINQ9BUH8 593 aa4.83□□□□□ -1.64
PTP4A1-204ENST00000578299 PLEKHG3A1L390 1219 aa4.82□□□□□ -1.64
PTP4A1-204ENST00000578299 SLC10A3P09131 477 aa4.82□□□□□ -1.64
PTP4A1-204ENST00000578299 DIXDC1Q155Q3 683 aa4.82□□□□□ -1.64
PTP4A1-204ENST00000578299 GCGRP47871 477 aa4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 NUTM1Q86Y26 1132 aa4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 KCTD12Q96CX2 325 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 PRR14Q9BWN1 585 aa4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 RSPH6AQ9H0K4 717 aa4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 TSR3Q9UJK0 312 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 HPS5Q9UPZ3 1129 aa4.81□□□□□ -1.64
PTP4A1-204ENST00000578299 CFHP08603 1231 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 BCAMP50895 628 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 PPP4CP60510 307 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 USP46P62068 366 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 KMT5BQ4FZB7 885 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 THSD4Q6ZMP0 1018 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 TBC1D2Q9BYX2 928 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 GOPCQ9HD26 462 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 MYT1LQ9UL68 1186 aa4.8□□□□□ -1.64
PTP4A1-204ENST00000578299 KDM4AO75164 1064 aa4.79□□□□□ -1.64
PTP4A1-204ENST00000578299 SH3D19Q5HYK7 790 aa4.79□□□□□ -1.64
PTP4A1-204ENST00000578299 SPNS2Q8IVW8 549 aa4.79□□□□□ -1.64
PTP4A1-204ENST00000578299 SPIRE2Q8WWL2 714 aa4.79□□□□□ -1.64
PTP4A1-204ENST00000578299 SKIV2LQ15477 1246 aaKnown RBP4.78□□□□□ -1.64
PTP4A1-204ENST00000578299 GRIPAP1Q4V328 841 aa4.78□□□□□ -1.64
PTP4A1-204ENST00000578299 NYAP1Q6ZVC0 841 aa4.78□□□□□ -1.64
PTP4A1-204ENST00000578299 ACTN4O43707 911 aaKnown RBP4.77□□□□□ -1.65
PTP4A1-204ENST00000578299 GJA5P36382 358 aa4.77□□□□□ -1.65
PTP4A1-204ENST00000578299 MYSM1Q5VVJ2 828 aa4.77□□□□□ -1.65
PTP4A1-204ENST00000578299 PCMTD1Q96MG8 357 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-204ENST00000578299 WBP1LQ9NX94 342 aa4.77□□□□□ -1.65
PTP4A1-204ENST00000578299 SPTLC1O15269 473 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 HOXA2O43364 376 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 ATP6V1AP38606 617 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 CLK2P49760 499 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 APLP1P51693 650 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 FUT2Q10981 343 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 RIC3Q7Z5B4 369 aa4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 RNF166Q96A37 237 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-204ENST00000578299 MOXD2PA6NHM9 499 aa4.75□□□□□ -1.65
PTP4A1-204ENST00000578299 PTPN5P54829 565 aa4.75□□□□□ -1.65
PTP4A1-204ENST00000578299 TUSC1Q2TAM9 212 aa4.75□□□□□ -1.65
PTP4A1-204ENST00000578299 RSBN1LQ6PCB5 846 aaPredicted RBP4.75□□□□□ -1.65
PTP4A1-204ENST00000578299 POLR3EQ9NVU0 708 aa4.75□□□□□ -1.65
PTP4A1-204ENST00000578299 NDUFV2P19404 249 aa4.74□□□□□ -1.65
PTP4A1-204ENST00000578299 HCSTQ9UBK5 93 aa4.74□□□□□ -1.65
PTP4A1-204ENST00000578299 PCDHB3Q9Y5E6 796 aa4.74□□□□□ -1.65
PTP4A1-204ENST00000578299 NR1I2O75469 434 aa4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 FDX1P10109 184 aa4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 MORN1Q5T089 497 aa4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 LIMD1Q9UGP4 676 aa4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 ATP1B4Q9UN42 357 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-204ENST00000578299 MMRN1Q13201 1228 aa4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 Q3C1V9 767 aa4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 PUS10Q3MIT2 529 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 PRPF38BQ5VTL8 546 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 PROCA1Q8NCQ7 364 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 HLA-CQ95604 372 aa4.72□□□□□ -1.65
PTP4A1-204ENST00000578299 LILRB3O75022 631 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 GUCA2AQ02747 115 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 CSPP1Q1MSJ5 1256 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 BLOC1S3Q6QNY0 202 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 ZBTB3Q9H5J0 574 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 PCDHGC3Q9UN70 934 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 SLC27A5Q9Y2P5 690 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 SALL2Q9Y467 1007 aaPredicted RBP4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 PCDHB15Q9Y5E8 787 aa4.71□□□□□ -1.66
PTP4A1-204ENST00000578299 SPDYE5A6NIY4 337 aa4.7□□□□□ -1.66
PTP4A1-204ENST00000578299 NUTM2BA6NNL0 878 aaPredicted RBP4.7□□□□□ -1.66
PTP4A1-204ENST00000578299 NUTM2EB1AL46 878 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms