RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
RAB11FIP4-202ENST00000578148 TMEM131LA2VDJ0 1609 aa13.73□□□□□ -0.21
RAB11FIP4-202ENST00000578148 KCNA6P17658 529 aa13.73□□□□□ -0.21
RAB11FIP4-202ENST00000578148 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
RAB11FIP4-202ENST00000578148 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
RAB11FIP4-202ENST00000578148 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
RAB11FIP4-202ENST00000578148 E9PCH4 1651 aa13.71□□□□□ -0.21
RAB11FIP4-202ENST00000578148 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
RAB11FIP4-202ENST00000578148 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
RAB11FIP4-202ENST00000578148 CHD2O14647 1828 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-202ENST00000578148 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
RAB11FIP4-202ENST00000578148 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
RAB11FIP4-202ENST00000578148 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
RAB11FIP4-202ENST00000578148 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP4-202ENST00000578148 MSH6P52701 1360 aa13.66□□□□□ -0.22
RAB11FIP4-202ENST00000578148 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
RAB11FIP4-202ENST00000578148 ADRA2BP18089 450 aa13.65□□□□□ -0.22
RAB11FIP4-202ENST00000578148 HDGFP51858 240 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP4-202ENST00000578148 BCANQ96GW7 911 aa13.64□□□□□ -0.23
RAB11FIP4-202ENST00000578148 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
RAB11FIP4-202ENST00000578148 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
RAB11FIP4-202ENST00000578148 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAB11FIP4-202ENST00000578148 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
RAB11FIP4-202ENST00000578148 NUP155O75694 1391 aa13.62□□□□□ -0.23
RAB11FIP4-202ENST00000578148 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
RAB11FIP4-202ENST00000578148 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP4-202ENST00000578148 TBX22Q9Y458 520 aa13.62□□□□□ -0.23
RAB11FIP4-202ENST00000578148 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
RAB11FIP4-202ENST00000578148 TRPM2O94759 1503 aa13.61□□□□□ -0.23
RAB11FIP4-202ENST00000578148 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
RAB11FIP4-202ENST00000578148 RGS17Q9UGC6 210 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP4-202ENST00000578148 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP4-202ENST00000578148 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.23
RAB11FIP4-202ENST00000578148 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
RAB11FIP4-202ENST00000578148 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
RAB11FIP4-202ENST00000578148 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-202ENST00000578148 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-202ENST00000578148 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP4-202ENST00000578148 JCADQ9P266 1359 aa13.57□□□□□ -0.24
RAB11FIP4-202ENST00000578148 ITGAEP38570 1179 aa13.55□□□□□ -0.24
RAB11FIP4-202ENST00000578148 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP4-202ENST00000578148 DCCP43146 1447 aa13.55□□□□□ -0.24
RAB11FIP4-202ENST00000578148 PTPRUQ92729 1446 aa13.55□□□□□ -0.24
RAB11FIP4-202ENST00000578148 RRBP1Q9P2E9 1410 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP4-202ENST00000578148 CLTCL1P53675 1640 aa13.54□□□□□ -0.24
RAB11FIP4-202ENST00000578148 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
RAB11FIP4-202ENST00000578148 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
RAB11FIP4-202ENST00000578148 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
RAB11FIP4-202ENST00000578148 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
RAB11FIP4-202ENST00000578148 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
RAB11FIP4-202ENST00000578148 KIF1BO60333 1816 aa13.51□□□□□ -0.25
RAB11FIP4-202ENST00000578148 ATF3P18847 181 aa13.51□□□□□ -0.25
RAB11FIP4-202ENST00000578148 POTEAQ6S8J7 498 aa13.51□□□□□ -0.25
RAB11FIP4-202ENST00000578148 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
RAB11FIP4-202ENST00000578148 LRP6O75581 1613 aa13.5□□□□□ -0.25
RAB11FIP4-202ENST00000578148 NAIPQ13075 1403 aa13.5□□□□□ -0.25
RAB11FIP4-202ENST00000578148 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
RAB11FIP4-202ENST00000578148 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP4-202ENST00000578148 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
RAB11FIP4-202ENST00000578148 NHSL1Q5SYE7 1610 aa13.48□□□□□ -0.25
RAB11FIP4-202ENST00000578148 MST1RQ04912 1400 aa13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 METP08581 1390 aa13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 ZNF326Q5BKZ1 582 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
RAB11FIP4-202ENST00000578148 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
RAB11FIP4-202ENST00000578148 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
RAB11FIP4-202ENST00000578148 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
RAB11FIP4-202ENST00000578148 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
RAB11FIP4-202ENST00000578148 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP4-202ENST00000578148 PPLO60437 1756 aa13.42□□□□□ -0.26
RAB11FIP4-202ENST00000578148 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP4-202ENST00000578148 LAMC1P11047 1609 aa13.41□□□□□ -0.26
RAB11FIP4-202ENST00000578148 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
RAB11FIP4-202ENST00000578148 C1orf167Q5SNV9 1468 aa13.38□□□□□ -0.27
RAB11FIP4-202ENST00000578148 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
RAB11FIP4-202ENST00000578148 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP4-202ENST00000578148 PNPLA6Q8IY17 1366 aa13.37□□□□□ -0.27
RAB11FIP4-202ENST00000578148 ROBO2Q9HCK4 1378 aa13.37□□□□□ -0.27
RAB11FIP4-202ENST00000578148 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
RAB11FIP4-202ENST00000578148 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP4-202ENST00000578148 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP4-202ENST00000578148 NUTM2BA6NNL0 878 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP4-202ENST00000578148 NUTM2EB1AL46 878 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP4-202ENST00000578148 NUTM2AQ8IVF1 878 aaPredicted RBP13.35□□□□□ -0.27
RAB11FIP4-202ENST00000578148 CDC42BPGQ6DT37 1551 aa13.35□□□□□ -0.27
RAB11FIP4-202ENST00000578148 IFT172Q9UG01 1749 aa13.34□□□□□ -0.27
RAB11FIP4-202ENST00000578148 AFF2P51816 1311 aa13.34□□□□□ -0.27
RAB11FIP4-202ENST00000578148 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
RAB11FIP4-202ENST00000578148 RXRBP28702 533 aa13.32□□□□□ -0.28
RAB11FIP4-202ENST00000578148 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP4-202ENST00000578148 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
RAB11FIP4-202ENST00000578148 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP4-202ENST00000578148 TECPR2O15040 1411 aa13.31□□□□□ -0.28
RAB11FIP4-202ENST00000578148 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
RAB11FIP4-202ENST00000578148 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP4-202ENST00000578148 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
RAB11FIP4-202ENST00000578148 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms