RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
MKS1-206ENST00000577824 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
MKS1-206ENST00000577824 NRXN1Q9ULB1 1477 aa18.51■□□□□ 0.55
MKS1-206ENST00000577824 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
MKS1-206ENST00000577824 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
MKS1-206ENST00000577824 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
MKS1-206ENST00000577824 HSPA2P54652 639 aa18.48■□□□□ 0.55
MKS1-206ENST00000577824 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
MKS1-206ENST00000577824 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
MKS1-206ENST00000577824 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
MKS1-206ENST00000577824 NRXN3Q9Y4C0 1643 aa18.47■□□□□ 0.55
MKS1-206ENST00000577824 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
MKS1-206ENST00000577824 DIP2AQ14689 1571 aa18.46■□□□□ 0.55
MKS1-206ENST00000577824 LTKP29376 864 aa18.45■□□□□ 0.54
MKS1-206ENST00000577824 ANKLE2Q86XL3 938 aa18.45■□□□□ 0.54
MKS1-206ENST00000577824 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
MKS1-206ENST00000577824 NPHP4O75161 1426 aaPredicted RBP18.44■□□□□ 0.54
MKS1-206ENST00000577824 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
MKS1-206ENST00000577824 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
MKS1-206ENST00000577824 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
MKS1-206ENST00000577824 EID1Q9Y6B2 187 aa18.43■□□□□ 0.54
MKS1-206ENST00000577824 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
MKS1-206ENST00000577824 LAMC1P11047 1609 aa18.42■□□□□ 0.54
MKS1-206ENST00000577824 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
MKS1-206ENST00000577824 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
MKS1-206ENST00000577824 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
MKS1-206ENST00000577824 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
MKS1-206ENST00000577824 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
MKS1-206ENST00000577824 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
MKS1-206ENST00000577824 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
MKS1-206ENST00000577824 PRAG1Q86YV5 1406 aa18.39■□□□□ 0.53
MKS1-206ENST00000577824 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
MKS1-206ENST00000577824 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
MKS1-206ENST00000577824 KIAA1210Q9ULL0 1709 aa18.37■□□□□ 0.53
MKS1-206ENST00000577824 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
MKS1-206ENST00000577824 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
MKS1-206ENST00000577824 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
MKS1-206ENST00000577824 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
MKS1-206ENST00000577824 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
MKS1-206ENST00000577824 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
MKS1-206ENST00000577824 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
MKS1-206ENST00000577824 PIK3R4Q99570 1358 aa18.33■□□□□ 0.53
MKS1-206ENST00000577824 NUTM2DQ5VT03 806 aaPredicted RBP18.33■□□□□ 0.52
MKS1-206ENST00000577824 TRPM1Q7Z4N2 1603 aa18.33■□□□□ 0.52
MKS1-206ENST00000577824 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
MKS1-206ENST00000577824 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
MKS1-206ENST00000577824 XRN1Q8IZH2 1706 aaKnown RBP18.31■□□□□ 0.52
MKS1-206ENST00000577824 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
MKS1-206ENST00000577824 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
MKS1-206ENST00000577824 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
MKS1-206ENST00000577824 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
MKS1-206ENST00000577824 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.52
MKS1-206ENST00000577824 METP08581 1390 aa18.27■□□□□ 0.51
MKS1-206ENST00000577824 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
MKS1-206ENST00000577824 TECPR2O15040 1411 aa18.26■□□□□ 0.51
MKS1-206ENST00000577824 GPRASP1Q5JY77 1395 aa18.26■□□□□ 0.51
MKS1-206ENST00000577824 PTPRUQ92729 1446 aa18.25■□□□□ 0.51
MKS1-206ENST00000577824 STRCP1A6NGW2 1772 aa18.25■□□□□ 0.51
MKS1-206ENST00000577824 CPS1P31327 1500 aa18.25■□□□□ 0.51
MKS1-206ENST00000577824 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
MKS1-206ENST00000577824 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
MKS1-206ENST00000577824 LTBP4Q8N2S1 1624 aa18.24■□□□□ 0.51
MKS1-206ENST00000577824 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
MKS1-206ENST00000577824 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
MKS1-206ENST00000577824 DLC1Q96QB1 1528 aa18.22■□□□□ 0.51
MKS1-206ENST00000577824 YTHDC2Q9H6S0 1430 aaKnown RBP18.22■□□□□ 0.51
MKS1-206ENST00000577824 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
MKS1-206ENST00000577824 BCANQ96GW7 911 aa18.21■□□□□ 0.51
MKS1-206ENST00000577824 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
MKS1-206ENST00000577824 KCNA6P17658 529 aa18.19■□□□□ 0.5
MKS1-206ENST00000577824 ZNF335Q9H4Z2 1342 aaPredicted RBP18.19■□□□□ 0.5
MKS1-206ENST00000577824 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
MKS1-206ENST00000577824 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
MKS1-206ENST00000577824 FAM135BQ49AJ0 1406 aa18.16■□□□□ 0.5
MKS1-206ENST00000577824 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
MKS1-206ENST00000577824 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
MKS1-206ENST00000577824 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
MKS1-206ENST00000577824 NBPF1Q3BBV0 1214 aa18.14■□□□□ 0.49
MKS1-206ENST00000577824 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
MKS1-206ENST00000577824 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
MKS1-206ENST00000577824 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
MKS1-206ENST00000577824 SIRT1Q96EB6 747 aa18.13■□□□□ 0.49
MKS1-206ENST00000577824 XIRP1Q702N8 1843 aaKnown RBP18.13■□□□□ 0.49
MKS1-206ENST00000577824 IQSEC2Q5JU85 1478 aa18.13■□□□□ 0.49
MKS1-206ENST00000577824 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
MKS1-206ENST00000577824 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
MKS1-206ENST00000577824 ADGRL3Q9HAR2 1447 aa18.07■□□□□ 0.48
MKS1-206ENST00000577824 TMEM94Q12767 1356 aa18.07■□□□□ 0.48
MKS1-206ENST00000577824 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
MKS1-206ENST00000577824 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.07■□□□□ 0.48
MKS1-206ENST00000577824 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
MKS1-206ENST00000577824 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
MKS1-206ENST00000577824 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
MKS1-206ENST00000577824 DCCP43146 1447 aa18.06■□□□□ 0.48
MKS1-206ENST00000577824 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
MKS1-206ENST00000577824 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
MKS1-206ENST00000577824 SBNO2Q9Y2G9 1366 aa18.05■□□□□ 0.48
MKS1-206ENST00000577824 STK26Q9P289 416 aa18.04■□□□□ 0.48
MKS1-206ENST00000577824 TRAK1Q9UPV9 953 aa18.04■□□□□ 0.48
MKS1-206ENST00000577824 USP47Q96K76 1375 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms