RNA–Protein interactions for RNA: ENST00000577760.1

RPL23-208, Transcript of ribosomal protein L23, human

Gene RPL23, Length 3,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL23-208	ENST00000577760	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.99	□□□□□ -0.17
RPL23-208	ENST00000577760	PANK2	Q9BZ23	570 aa		13.99	□□□□□ -0.17
RPL23-208	ENST00000577760	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.98	□□□□□ -0.17
RPL23-208	ENST00000577760	UPF2	Q9HAU5	1272 aa	Known RBP	13.98	□□□□□ -0.17
RPL23-208	ENST00000577760	GRIN2A	Q12879	1464 aa		13.97	□□□□□ -0.17
RPL23-208	ENST00000577760	PLA2R1	Q13018	1463 aa		13.97	□□□□□ -0.17
RPL23-208	ENST00000577760	CDC42BPA	Q5VT25	1732 aa		13.97	□□□□□ -0.17
RPL23-208	ENST00000577760		E9PSI1	815 aa		13.96	□□□□□ -0.17
RPL23-208	ENST00000577760	TBC1D2	Q9BYX2	928 aa		13.96	□□□□□ -0.17
RPL23-208	ENST00000577760	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.96	□□□□□ -0.17
RPL23-208	ENST00000577760	GPRASP1	Q5JY77	1395 aa		13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	PCDHB15	Q9Y5E8	787 aa		13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	NKTR	P30414	1462 aa	Known RBP	13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	PDZRN3	Q9UPQ7	1066 aa		13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	PTPRG	P23470	1445 aa		13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	CARMIL2	Q6F5E8	1435 aa		13.95	□□□□□ -0.18
RPL23-208	ENST00000577760	CGNL1	Q0VF96	1302 aa		13.94	□□□□□ -0.18
RPL23-208	ENST00000577760	RLBP1	P12271	317 aa		13.94	□□□□□ -0.18
RPL23-208	ENST00000577760	MFAP1	P55081	439 aa	Known RBP	13.94	□□□□□ -0.18
RPL23-208	ENST00000577760	EIF3A	Q14152	1382 aa	Known RBP	13.94	□□□□□ -0.18
RPL23-208	ENST00000577760	ATP10B	O94823	1461 aa		13.94	□□□□□ -0.18
RPL23-208	ENST00000577760	MAPK8IP3	Q9UPT6	1336 aa		13.93	□□□□□ -0.18
RPL23-208	ENST00000577760	XRCC6	P12956	609 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RPL23-208	ENST00000577760	L1TD1	Q5T7N2	865 aa	Known RBP	13.93	□□□□□ -0.18
RPL23-208	ENST00000577760	GOLGA6L3	A6NEY3	463 aa		13.93	□□□□□ -0.18
RPL23-208	ENST00000577760	WDR7	Q9Y4E6	1490 aa		13.92	□□□□□ -0.18
RPL23-208	ENST00000577760	TRMT2A	Q8IZ69	625 aa	Known RBP	13.92	□□□□□ -0.18
RPL23-208	ENST00000577760	WWC1	Q8IX03	1113 aa		13.92	□□□□□ -0.18
RPL23-208	ENST00000577760	SENP3	Q9H4L4	574 aa	Predicted RBP	13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	ABCC10	Q5T3U5	1492 aa		13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	PRDM15	P57071	1507 aa	Predicted RBP	13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	MRC2	Q9UBG0	1479 aa		13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	SHANK2	Q9UPX8	1470 aa		13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	EIF4G3	O43432	1585 aa	Known RBP	13.91	□□□□□ -0.18
RPL23-208	ENST00000577760	CDCA8	Q53HL2	280 aa		13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	ANTXR1	Q9H6X2	564 aa		13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	PDE3A	Q14432	1141 aa		13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	PNN	Q9H307	717 aa	Known RBP	13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	ADCY10	Q96PN6	1610 aa		13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	CCDC141	Q6ZP82	1450 aa		13.9	□□□□□ -0.18
RPL23-208	ENST00000577760	INSR	P06213	1382 aa		13.9	□□□□□ -0.19
RPL23-208	ENST00000577760	TBC1D32	Q96NH3	1257 aa		13.89	□□□□□ -0.19
RPL23-208	ENST00000577760	MCM4	P33991	863 aa		13.88	□□□□□ -0.19
RPL23-208	ENST00000577760	CFAP70	Q5T0N1	1121 aa		13.88	□□□□□ -0.19
RPL23-208	ENST00000577760	CARD14	Q9BXL6	1004 aa		13.88	□□□□□ -0.19
RPL23-208	ENST00000577760	FOXD4L1	Q9NU39	408 aa		13.87	□□□□□ -0.19
RPL23-208	ENST00000577760	RARS	P54136	660 aa	Known RBP	13.87	□□□□□ -0.19
RPL23-208	ENST00000577760	PMFBP1	Q8TBY8	1022 aa		13.87	□□□□□ -0.19
RPL23-208	ENST00000577760	IFT140	Q96RY7	1462 aa		13.87	□□□□□ -0.19
RPL23-208	ENST00000577760	TCP11L2	Q8N4U5	519 aa		13.87	□□□□□ -0.19
RPL23-208	ENST00000577760	TRAK2	O60296	914 aa		13.86	□□□□□ -0.19
RPL23-208	ENST00000577760	ASXL1	Q8IXJ9	1541 aa		13.86	□□□□□ -0.19
RPL23-208	ENST00000577760	SYCP2	Q9BX26	1530 aa		13.86	□□□□□ -0.19
RPL23-208	ENST00000577760	MORC1	Q86VD1	984 aa		13.85	□□□□□ -0.19
RPL23-208	ENST00000577760	FTSJ3	Q8IY81	847 aa	Known RBP	13.85	□□□□□ -0.19
RPL23-208	ENST00000577760	CHGA	P10645	457 aa	Known RBP	13.85	□□□□□ -0.19
RPL23-208	ENST00000577760	C22orf23	Q9BZE7	217 aa		13.85	□□□□□ -0.19
RPL23-208	ENST00000577760	VSIG10	Q8N0Z9	540 aa		13.84	□□□□□ -0.19
RPL23-208	ENST00000577760	RWDD1	Q9H446	243 aa	Predicted RBP	13.84	□□□□□ -0.19
RPL23-208	ENST00000577760	MYO5C	Q9NQX4	1742 aa		13.84	□□□□□ -0.19
RPL23-208	ENST00000577760	SAMD9L	Q8IVG5	1584 aa		13.83	□□□□□ -0.2
RPL23-208	ENST00000577760	TSR2	Q969E8	191 aa	Known RBP	13.83	□□□□□ -0.2
RPL23-208	ENST00000577760	ARHGAP5	Q13017	1502 aa		13.83	□□□□□ -0.2
RPL23-208	ENST00000577760	RSPH4A	Q5TD94	716 aa		13.83	□□□□□ -0.2
RPL23-208	ENST00000577760	PIK3C2G	O75747	1445 aa		13.83	□□□□□ -0.2
RPL23-208	ENST00000577760	NLRP1	Q9C000	1473 aa		13.82	□□□□□ -0.2
RPL23-208	ENST00000577760	CHMP5	Q9NZZ3	219 aa		13.81	□□□□□ -0.2
RPL23-208	ENST00000577760	ITPRIP	Q8IWB1	547 aa		13.81	□□□□□ -0.2
RPL23-208	ENST00000577760	SLC12A5	Q9H2X9	1139 aa		13.81	□□□□□ -0.2
RPL23-208	ENST00000577760	HSCB	Q8IWL3	235 aa		13.8	□□□□□ -0.2
RPL23-208	ENST00000577760	MYH16	Q9H6N6	1097 aa		13.8	□□□□□ -0.2
RPL23-208	ENST00000577760	HSP90AA1	P07900	732 aa	Known RBP	13.8	□□□□□ -0.2
RPL23-208	ENST00000577760	TRAK1	Q9UPV9	953 aa		13.8	□□□□□ -0.2
RPL23-208	ENST00000577760	ABCA8	O94911	1581 aa		13.8	□□□□□ -0.2
RPL23-208	ENST00000577760	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	8e-19	■■■■■ 36.8
RPL23-208	ENST00000577760	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	SYNJ2	O15056	1496 aa		13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	MTHFS	P49914	203 aa		13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	RUNDC1	Q96C34	613 aa		13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	SMC4	Q9NTJ3	1288 aa		13.79	□□□□□ -0.2
RPL23-208	ENST00000577760	SCAF11	Q99590	1463 aa	Known RBP	13.78	□□□□□ -0.2
RPL23-208	ENST00000577760	AFAP1	Q8N556	730 aa		13.78	□□□□□ -0.2
RPL23-208	ENST00000577760	GRPEL1	Q9HAV7	217 aa		13.78	□□□□□ -0.2
RPL23-208	ENST00000577760	ARHGEF5	Q12774	1597 aa		13.78	□□□□□ -0.2
RPL23-208	ENST00000577760	NUP160	Q12769	1436 aa		13.77	□□□□□ -0.2
RPL23-208	ENST00000577760	FSD2	A1L4K1	749 aa		13.77	□□□□□ -0.2
RPL23-208	ENST00000577760	TRIM44	Q96DX7	344 aa	Predicted RBP	13.77	□□□□□ -0.2
RPL23-208	ENST00000577760	ADGRF5	Q8IZF2	1346 aa		13.77	□□□□□ -0.2
RPL23-208	ENST00000577760	MVP	Q14764	893 aa	Known RBP	13.77	□□□□□ -0.21
RPL23-208	ENST00000577760	CDC42BPB	Q9Y5S2	1711 aa		13.77	□□□□□ -0.21
RPL23-208	ENST00000577760	U2SURP	O15042	1029 aa	Known RBP	13.77	□□□□□ -0.21
RPL23-208	ENST00000577760	ZKSCAN2	Q63HK3	967 aa		13.77	□□□□□ -0.21
RPL23-208	ENST00000577760	DZIP1L	Q8IYY4	767 aa	Known RBP	13.77	□□□□□ -0.21
RPL23-208	ENST00000577760	HSP90AB1	P08238	724 aa	Known RBP	13.76	□□□□□ -0.21
RPL23-208	ENST00000577760	CLCN1	P35523	988 aa		13.76	□□□□□ -0.21
RPL23-208	ENST00000577760	LNPK	Q9C0E8	428 aa		13.76	□□□□□ -0.21
RPL23-208	ENST00000577760	MRE11	P49959	708 aa		13.76	□□□□□ -0.21
RPL23-208	ENST00000577760	GLIPR1L2	Q4G1C9	344 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms