RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
PRPF8-215ENST00000576958 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
PRPF8-215ENST00000576958 KCNA6P17658 529 aa18.66■□□□□ 0.58
PRPF8-215ENST00000576958 ITGAEP38570 1179 aa18.66■□□□□ 0.58
PRPF8-215ENST00000576958 NWD1Q149M9 1564 aa18.66■□□□□ 0.58
PRPF8-215ENST00000576958 PROSER2Q86WR7 435 aaPredicted RBP18.65■□□□□ 0.58
PRPF8-215ENST00000576958 BCANQ96GW7 911 aa18.65■□□□□ 0.58
PRPF8-215ENST00000576958 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
PRPF8-215ENST00000576958 ROBO1Q9Y6N7 1651 aa18.65■□□□□ 0.58
PRPF8-215ENST00000576958 RIMS2Q9UQ26 1411 aa18.65■□□□□ 0.58
PRPF8-215ENST00000576958 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
PRPF8-215ENST00000576958 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
PRPF8-215ENST00000576958 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
PRPF8-215ENST00000576958 CHD2O14647 1828 aaKnown RBP18.6■□□□□ 0.57
PRPF8-215ENST00000576958 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
PRPF8-215ENST00000576958 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
PRPF8-215ENST00000576958 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
PRPF8-215ENST00000576958 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
PRPF8-215ENST00000576958 ADAMTS13Q76LX8 1427 aa18.58■□□□□ 0.57
PRPF8-215ENST00000576958 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
PRPF8-215ENST00000576958 NUP155O75694 1391 aa18.55■□□□□ 0.56
PRPF8-215ENST00000576958 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
PRPF8-215ENST00000576958 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
PRPF8-215ENST00000576958 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
PRPF8-215ENST00000576958 PHLPP1O60346 1717 aa18.52■□□□□ 0.56
PRPF8-215ENST00000576958 MSH6P52701 1360 aa18.52■□□□□ 0.55
PRPF8-215ENST00000576958 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
PRPF8-215ENST00000576958 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
PRPF8-215ENST00000576958 TBX22Q9Y458 520 aa18.49■□□□□ 0.55
PRPF8-215ENST00000576958 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
PRPF8-215ENST00000576958 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
PRPF8-215ENST00000576958 SETD1AO15047 1707 aaKnown RBP18.47■□□□□ 0.55
PRPF8-215ENST00000576958 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
PRPF8-215ENST00000576958 LRP6O75581 1613 aa18.46■□□□□ 0.55
PRPF8-215ENST00000576958 CLTCL1P53675 1640 aa18.45■□□□□ 0.54
PRPF8-215ENST00000576958 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
PRPF8-215ENST00000576958 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
PRPF8-215ENST00000576958 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
PRPF8-215ENST00000576958 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
PRPF8-215ENST00000576958 TRPM2O94759 1503 aa18.43■□□□□ 0.54
PRPF8-215ENST00000576958 METP08581 1390 aa18.42■□□□□ 0.54
PRPF8-215ENST00000576958 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
PRPF8-215ENST00000576958 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
PRPF8-215ENST00000576958 NEXMIFQ5QGS0 1516 aa18.39■□□□□ 0.54
PRPF8-215ENST00000576958 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
PRPF8-215ENST00000576958 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
PRPF8-215ENST00000576958 JCADQ9P266 1359 aa18.39■□□□□ 0.53
PRPF8-215ENST00000576958 NAIPQ13075 1403 aa18.39■□□□□ 0.53
PRPF8-215ENST00000576958 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
PRPF8-215ENST00000576958 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
PRPF8-215ENST00000576958 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
PRPF8-215ENST00000576958 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
PRPF8-215ENST00000576958 C19orf44Q9H6X5 657 aa18.37■□□□□ 0.53
PRPF8-215ENST00000576958 PIK3R4Q99570 1358 aa18.36■□□□□ 0.53
PRPF8-215ENST00000576958 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
PRPF8-215ENST00000576958 ATF3P18847 181 aa18.35■□□□□ 0.53
PRPF8-215ENST00000576958 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
PRPF8-215ENST00000576958 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
PRPF8-215ENST00000576958 MST1RQ04912 1400 aa18.33■□□□□ 0.53
PRPF8-215ENST00000576958 CADPS2Q86UW7 1296 aa18.33■□□□□ 0.52
PRPF8-215ENST00000576958 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
PRPF8-215ENST00000576958 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
PRPF8-215ENST00000576958 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
PRPF8-215ENST00000576958 FOXD1Q16676 465 aa18.31■□□□□ 0.52
PRPF8-215ENST00000576958 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
PRPF8-215ENST00000576958 KIF1BO60333 1816 aa18.3■□□□□ 0.52
PRPF8-215ENST00000576958 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
PRPF8-215ENST00000576958 TRIM52Q96A61 297 aa18.28■□□□□ 0.52
PRPF8-215ENST00000576958 ADGRL3Q9HAR2 1447 aa18.27■□□□□ 0.52
PRPF8-215ENST00000576958 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.52
PRPF8-215ENST00000576958 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
PRPF8-215ENST00000576958 DCCP43146 1447 aa18.26■□□□□ 0.51
PRPF8-215ENST00000576958 SPATA31A6Q5VVP1 1343 aa18.25■□□□□ 0.51
PRPF8-215ENST00000576958 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
PRPF8-215ENST00000576958 PPLO60437 1756 aa18.23■□□□□ 0.51
PRPF8-215ENST00000576958 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
PRPF8-215ENST00000576958 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
PRPF8-215ENST00000576958 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
PRPF8-215ENST00000576958 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
PRPF8-215ENST00000576958 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
PRPF8-215ENST00000576958 AFF2P51816 1311 aa18.2■□□□□ 0.5
PRPF8-215ENST00000576958 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
PRPF8-215ENST00000576958 PTCH1Q13635 1447 aa18.17■□□□□ 0.5
PRPF8-215ENST00000576958 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
PRPF8-215ENST00000576958 ZNF772Q68DY9 489 aaPredicted RBP18.16■□□□□ 0.5
PRPF8-215ENST00000576958 UPF1Q92900 1129 aaKnown RBP eCLIP18.15■□□□□ 0.5
PRPF8-215ENST00000576958 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
PRPF8-215ENST00000576958 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
PRPF8-215ENST00000576958 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
PRPF8-215ENST00000576958 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
PRPF8-215ENST00000576958 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
PRPF8-215ENST00000576958 RGS12O14924 1447 aa18.13■□□□□ 0.49
PRPF8-215ENST00000576958 LAMC1P11047 1609 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 RXRBP28702 533 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
PRPF8-215ENST00000576958 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 STK26Q9P289 416 aa18.12■□□□□ 0.49
PRPF8-215ENST00000576958 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms