RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DDX19BQ9UMR2 479 aa22.24■■□□□ 1.15
ATPAF1-214ENST00000576409 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
ATPAF1-214ENST00000576409 PTPRGP23470 1445 aa22.22■■□□□ 1.15
ATPAF1-214ENST00000576409 KIAA2012Q0VF49 1180 aa22.22■■□□□ 1.15
ATPAF1-214ENST00000576409 RILPL2Q969X0 211 aa22.22■■□□□ 1.15
ATPAF1-214ENST00000576409 C1orf115Q9H7X2 142 aa22.22■■□□□ 1.15
ATPAF1-214ENST00000576409 MIA2Q96PC5 1412 aa22.21■■□□□ 1.15
ATPAF1-214ENST00000576409 KIAA1211Q6ZU35 1233 aa22.21■■□□□ 1.15
ATPAF1-214ENST00000576409 FAM13BQ9NYF5 915 aa22.21■■□□□ 1.15
ATPAF1-214ENST00000576409 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
ATPAF1-214ENST00000576409 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
ATPAF1-214ENST00000576409 CABP2Q9NPB3 220 aa22.2■■□□□ 1.14
ATPAF1-214ENST00000576409 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
ATPAF1-214ENST00000576409 PCF11O94913 1555 aaKnown RBP22.19■■□□□ 1.14
ATPAF1-214ENST00000576409 CHAF1AQ13111 956 aaPredicted RBP22.19■■□□□ 1.14
ATPAF1-214ENST00000576409 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
ATPAF1-214ENST00000576409 ST18O60284 1047 aa22.18■■□□□ 1.14
ATPAF1-214ENST00000576409 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
ATPAF1-214ENST00000576409 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
ATPAF1-214ENST00000576409 MCTP1Q6DN14 999 aa22.17■■□□□ 1.14
ATPAF1-214ENST00000576409 RNF214Q8ND24 703 aa22.16■■□□□ 1.14
ATPAF1-214ENST00000576409 MPNDQ8N594 471 aa22.15■■□□□ 1.14
ATPAF1-214ENST00000576409 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
ATPAF1-214ENST00000576409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.15■■□□□ 1.14
ATPAF1-214ENST00000576409 FAM43AQ8N2R8 423 aa22.15■■□□□ 1.14
ATPAF1-214ENST00000576409 STK31Q9BXU1 1019 aa22.14■■□□□ 1.14
ATPAF1-214ENST00000576409 DAPK1P53355 1430 aa22.14■■□□□ 1.13
ATPAF1-214ENST00000576409 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
ATPAF1-214ENST00000576409 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
ATPAF1-214ENST00000576409 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
ATPAF1-214ENST00000576409 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
ATPAF1-214ENST00000576409 PDE3AQ14432 1141 aa22.13■■□□□ 1.13
ATPAF1-214ENST00000576409 PTMSP20962 102 aa22.12■■□□□ 1.13
ATPAF1-214ENST00000576409 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
ATPAF1-214ENST00000576409 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
ATPAF1-214ENST00000576409 HMMRO75330 724 aa22.11■■□□□ 1.13
ATPAF1-214ENST00000576409 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-214ENST00000576409 MRE11P49959 708 aa22.09■■□□□ 1.13
ATPAF1-214ENST00000576409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-214ENST00000576409 SKOR2Q2VWA4 1001 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-214ENST00000576409 SYAP1Q96A49 352 aaPredicted RBP22.08■■□□□ 1.13
ATPAF1-214ENST00000576409 CFAP44Q96MT7 982 aa22.08■■□□□ 1.13
ATPAF1-214ENST00000576409 NOB1Q9ULX3 412 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-214ENST00000576409 DUSP27Q5VZP5 1158 aa22.07■■□□□ 1.12
ATPAF1-214ENST00000576409 CAVIN1Q6NZI2 390 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-214ENST00000576409 MCM4P33991 863 aa22.06■■□□□ 1.12
ATPAF1-214ENST00000576409 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
ATPAF1-214ENST00000576409 IGHDP01880 384 aa22.06■■□□□ 1.12
ATPAF1-214ENST00000576409 ANO2Q9NQ90 1003 aa22.06■■□□□ 1.12
ATPAF1-214ENST00000576409 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
ATPAF1-214ENST00000576409 R3HCC1Q9Y3T6 440 aaKnown RBP22.05■■□□□ 1.12
ATPAF1-214ENST00000576409 CCDC9Q9Y3X0 531 aaKnown RBP22.05■■□□□ 1.12
ATPAF1-214ENST00000576409 C9orf84Q5VXU9 1444 aa22.05■■□□□ 1.12
ATPAF1-214ENST00000576409 NGEFQ8N5V2 710 aa22.04■■□□□ 1.12
ATPAF1-214ENST00000576409 RBM10P98175 930 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-214ENST00000576409 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-214ENST00000576409 EHBP1L1Q8N3D4 1523 aa22.03■■□□□ 1.12
ATPAF1-214ENST00000576409 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
ATPAF1-214ENST00000576409 ABCC5O15440 1437 aa22.02■■□□□ 1.12
ATPAF1-214ENST00000576409 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
ATPAF1-214ENST00000576409 ERBINQ96RT1 1412 aa22.02■■□□□ 1.11
ATPAF1-214ENST00000576409 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
ATPAF1-214ENST00000576409 PRKAR2BP31323 418 aa22■■□□□ 1.11
ATPAF1-214ENST00000576409 AMPHP49418 695 aa22■■□□□ 1.11
ATPAF1-214ENST00000576409 KIF16BQ96L93 1317 aa22■■□□□ 1.11
ATPAF1-214ENST00000576409 PRPF40AO75400 957 aaKnown RBP21.99■■□□□ 1.11
ATPAF1-214ENST00000576409 TBC1D2Q9BYX2 928 aa21.99■■□□□ 1.11
ATPAF1-214ENST00000576409 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
ATPAF1-214ENST00000576409 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
ATPAF1-214ENST00000576409 RPRD2Q5VT52 1461 aaKnown RBP21.98■■□□□ 1.11
ATPAF1-214ENST00000576409 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
ATPAF1-214ENST00000576409 EIF2S2P20042 333 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 ZNF330Q9Y3S2 320 aaPredicted RBP21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 GRPEL1Q9HAV7 217 aa21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 REC8O95072 547 aa21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 COG3Q96JB2 828 aa21.97■■□□□ 1.11
ATPAF1-214ENST00000576409 PTPN23Q9H3S7 1636 aa21.96■■□□□ 1.11
ATPAF1-214ENST00000576409 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-214ENST00000576409 ATF7IPQ6VMQ6 1270 aa21.95■■□□□ 1.11
ATPAF1-214ENST00000576409 MAP3K1Q13233 1512 aa21.95■■□□□ 1.1
ATPAF1-214ENST00000576409 API5Q9BZZ5 524 aaKnown RBP21.95■■□□□ 1.1
ATPAF1-214ENST00000576409 CDK11BP21127 795 aaKnown RBP21.94■■□□□ 1.1
ATPAF1-214ENST00000576409 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
ATPAF1-214ENST00000576409 NEK4P51957 841 aa21.94■■□□□ 1.1
ATPAF1-214ENST00000576409 ZNF428Q96B54 188 aa21.94■■□□□ 1.1
ATPAF1-214ENST00000576409 FKBP5Q13451 457 aaPredicted RBP21.93■■□□□ 1.1
ATPAF1-214ENST00000576409 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
ATPAF1-214ENST00000576409 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
ATPAF1-214ENST00000576409 ESPNB1AK53 854 aa21.93■■□□□ 1.1
ATPAF1-214ENST00000576409 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
ATPAF1-214ENST00000576409 CDC45O75419 566 aa21.92■■□□□ 1.1
ATPAF1-214ENST00000576409 NUCB2P80303 420 aa21.92■■□□□ 1.1
ATPAF1-214ENST00000576409 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.92■■□□□ 1.1
ATPAF1-214ENST00000576409 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
ATPAF1-214ENST00000576409 INTS3Q68E01 1043 aaKnown RBP21.91■■□□□ 1.1
ATPAF1-214ENST00000576409 DISP3Q9P2K9 1392 aa21.91■■□□□ 1.1
ATPAF1-214ENST00000576409 SEC24BO95487 1268 aa21.91■■□□□ 1.1
ATPAF1-214ENST00000576409 GOLGA6L6A8MZA4 724 aa21.91■■□□□ 1.1
ATPAF1-214ENST00000576409 NRDCO43847 1150 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms